EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPNYG00000007025 (Gene tree)
Gene ID: -
Gene Symbol: larp6b
Alias: im:7142825|wu:fa55b04|zgc:162969
Full Name: La ribonucleoprotein domain family%2C member 6b
Gene Type: protein_coding
Species: Pundamilia_nyererei
Status: putative
Strand: Plus strand
Length: 8907 bases
Position: chrJH419236.1:3671517-3680423
Accession: ZDB-GENE-041008-244
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPNYP00000009254	La	PF05383.17	2.7e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPNYT00000009468	-	1260	-	ENSPNYP00000009254	419 (aa)	-	-

Gene Model

Click here to download ENSPNYG00000007025's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPNYG00000007025's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPNYG00000007025	larp6b	90	31.193	ENSPNYG00000009835	larp6a	83	30.645

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPNYG00000007025	larp6b	89	55.968	ENSAPOG00000003568	-	95	55.645	Acanthochromis_polyacanthus
ENSPNYG00000007025	larp6b	86	68.524	ENSACIG00000008349	-	81	68.524	Amphilophus_citrinellus
ENSPNYG00000007025	larp6b	86	59.836	ENSAOCG00000004646	larp6b	91	59.341	Amphiprion_ocellaris
ENSPNYG00000007025	larp6b	89	58.886	ENSAPEG00000022748	-	93	58.400	Amphiprion_percula
ENSPNYG00000007025	larp6b	86	59.452	ENSATEG00000021222	-	92	58.133	Anabas_testudineus
ENSPNYG00000007025	larp6b	86	97.230	ENSACLG00000009988	larp6b	89	97.230	Astatotilapia_calliptera
ENSPNYG00000007025	larp6b	51	46.696	ENSAMXG00000018956	larp6b	88	35.402	Astyanax_mexicanus
ENSPNYG00000007025	larp6b	86	46.995	ENSCVAG00000012145	-	88	47.383	Cyprinodon_variegatus
ENSPNYG00000007025	larp6b	86	34.732	ENSDARG00000003968	larp6b	88	35.071	Danio_rerio
ENSPNYG00000007025	larp6b	83	35.062	ENSELUG00000021677	larp6b	83	35.062	Esox_lucius
ENSPNYG00000007025	larp6b	89	50.396	ENSFHEG00000010409	-	84	49.867	Fundulus_heteroclitus
ENSPNYG00000007025	larp6b	88	52.316	ENSGAFG00000020138	-	88	52.316	Gambusia_affinis
ENSPNYG00000007025	larp6b	86	96.676	ENSHBUG00000012344	larp6b	88	96.676	Haplochromis_burtoni
ENSPNYG00000007025	larp6b	86	34.442	ENSIPUG00000007609	larp6b	86	35.181	Ictalurus_punctatus
ENSPNYG00000007025	larp6b	86	57.895	ENSLBEG00000016460	-	97	56.438	Labrus_bergylta
ENSPNYG00000007025	larp6b	89	61.230	ENSMAMG00000005509	-	90	60.647	Mastacembelus_armatus
ENSPNYG00000007025	larp6b	86	96.953	ENSMZEG00005024390	larp6b	89	96.953	Maylandia_zebra
ENSPNYG00000007025	larp6b	86	94.475	ENSNBRG00000012748	larp6b	90	94.475	Neolamprologus_brichardi
ENSPNYG00000007025	larp6b	87	52.033	ENSPLAG00000005133	-	96	51.639	Poecilia_latipinna
ENSPNYG00000007025	larp6b	87	51.639	ENSPMEG00000019947	-	97	51.639	Poecilia_mexicana
ENSPNYG00000007025	larp6b	97	50.370	ENSPREG00000011853	-	93	50.370	Poecilia_reticulata
ENSPNYG00000007025	larp6b	83	37.010	ENSPNAG00000023854	larp6b	84	36.919	Pygocentrus_nattereri
ENSPNYG00000007025	larp6b	66	61.566	ENSSDUG00000009842	-	82	61.566	Seriola_dumerili
ENSPNYG00000007025	larp6b	87	59.350	ENSSLDG00000017081	-	89	56.250	Seriola_lalandi_dorsalis
ENSPNYG00000007025	larp6b	96	58.373	ENSSPAG00000014320	-	99	58.513	Stegastes_partitus
ENSPNYG00000007025	larp6b	89	50.806	ENSXCOG00000018917	-	93	50.806	Xiphophorus_couchianus
ENSPNYG00000007025	larp6b	89	50.943	ENSXMAG00000025734	-	94	50.943	Xiphophorus_maculatus