EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPNYG00000007160 (Gene tree)
Gene ID: -
Gene Symbol: srek1
Alias: zgc:100974
Full Name: splicing regulatory glutamic acid and lysine rich protein 1
Gene Type: protein_coding
Species: Pundamilia_nyererei
Status: putative
Strand: Minus strand
Length: 10432 bases
Position: chrJH419207.1:2658464-2668895
Accession: 102196748
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPNYP00000009459	RRM_1	PF00076.22	2.7e-14	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPNYT00000009676	-	6351	XM_005720144	ENSPNYP00000009459	316 (aa)	XP_005720201	-

Gene Model

Click here to download ENSPNYG00000007160's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPNYG00000007160's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPNYG00000007160	srek1	99	83.861	ENSAPOG00000023618	srek1	80	81.505	Acanthochromis_polyacanthus
ENSPNYG00000007160	srek1	98	84.395	ENSAOCG00000024379	srek1	80	81.761	Amphiprion_ocellaris
ENSPNYG00000007160	srek1	99	78.233	ENSATEG00000009450	srek1	80	74.763	Anabas_testudineus
ENSPNYG00000007160	srek1	52	79.268	ENSANAG00000031358	SREK1	65	89.764	Aotus_nancymaae
ENSPNYG00000007160	srek1	98	54.925	ENSAMXG00000043877	srek1	53	86.667	Astyanax_mexicanus
ENSPNYG00000007160	srek1	52	79.268	ENSCJAG00000015950	SREK1	65	89.764	Callithrix_jacchus
ENSPNYG00000007160	srek1	99	81.132	ENSFHEG00000020971	srek1	90	81.132	Fundulus_heteroclitus
ENSPNYG00000007160	srek1	98	54.318	ENSIPUG00000016851	srek1	68	55.707	Ictalurus_punctatus
ENSPNYG00000007160	srek1	62	59.596	ENSMGAG00000002047	SREK1	66	67.262	Meleagris_gallopavo
ENSPNYG00000007160	srek1	100	77.673	ENSMALG00000017086	srek1	67	79.310	Monopterus_albus
ENSPNYG00000007160	srek1	100	87.464	ENSONIG00000011080	srek1	74	96.241	Oreochromis_niloticus
ENSPNYG00000007160	srek1	98	75.484	ENSOMEG00000015817	srek1	72	75.633	Oryzias_melastigma
ENSPNYG00000007160	srek1	98	54.987	ENSPKIG00000025563	srek1	69	53.463	Paramormyrops_kingsleyae
ENSPNYG00000007160	srek1	62	69.036	ENSPEMG00000024051	-	65	61.789	Peromyscus_maniculatus_bairdii
ENSPNYG00000007160	srek1	99	71.148	ENSPMEG00000006831	srek1	87	72.549	Poecilia_mexicana
ENSPNYG00000007160	srek1	75	57.317	ENSPCAG00000004955	SREK1	51	56.655	Procavia_capensis
ENSPNYG00000007160	srek1	98	60.597	ENSPNAG00000004328	srek1	67	62.687	Pygocentrus_nattereri
ENSPNYG00000007160	srek1	98	53.699	ENSSFOG00015004995	srek1	55	85.207	Scleropages_formosus
ENSPNYG00000007160	srek1	99	74.534	ENSSMAG00000011808	srek1	67	76.398	Scophthalmus_maximus
ENSPNYG00000007160	srek1	83	68.061	ENSTNIG00000013463	srek1	57	62.500	Tetraodon_nigroviridis