EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPNYG00000007625 (Gene tree)
Gene ID: 102204445
Gene Symbol: prpf38b
Alias: wu:fc43b05|zgc:63496
Full Name: pre-mRNA processing factor 38B
Gene Type: protein_coding
Species: Pundamilia_nyererei
Status: putative
Strand: Plus strand
Length: 7056 bases
Position: chrJH419209.1:3238689-3245744
Accession: 102204445
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPNYP00000010037	PRP38	PF03371.15	3.2e-55	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPNYT00000010286	-	2594	XM_005721199	ENSPNYP00000010037	461 (aa)	XP_005721256	UPI0003AF52B0

Gene Model

Click here to download ENSPNYG00000007625's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPNYG00000007625's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPNYG00000007625	prpf38b	62	94.792	ENSAPOG00000005297	prpf38b	98	90.632	Acanthochromis_polyacanthus
ENSPNYG00000007625	prpf38b	62	94.792	ENSAPOG00000012791	-	98	90.632	Acanthochromis_polyacanthus
ENSPNYG00000007625	prpf38b	62	94.444	ENSAOCG00000012675	prpf38b	89	90.850	Amphiprion_ocellaris
ENSPNYG00000007625	prpf38b	62	94.097	ENSAPEG00000010974	prpf38b	94	96.951	Amphiprion_percula
ENSPNYG00000007625	prpf38b	100	99.783	ENSACLG00000001712	prpf38b	100	99.783	Astatotilapia_calliptera
ENSPNYG00000007625	prpf38b	98	69.715	ENSDARG00000053101	prpf38b	95	89.634	Danio_rerio
ENSPNYG00000007625	prpf38b	98	85.903	ENSFHEG00000002861	prpf38b	98	85.903	Fundulus_heteroclitus
ENSPNYG00000007625	prpf38b	99	83.298	ENSGACG00000015154	prpf38b	99	83.726	Gasterosteus_aculeatus
ENSPNYG00000007625	prpf38b	100	100.000	ENSHBUG00000022496	prpf38b	100	100.000	Haplochromis_burtoni
ENSPNYG00000007625	prpf38b	96	68.790	ENSIPUG00000014942	prpf38b	95	64.317	Ictalurus_punctatus
ENSPNYG00000007625	prpf38b	98	87.336	ENSLBEG00000024500	prpf38b	89	94.512	Labrus_bergylta
ENSPNYG00000007625	prpf38b	98	92.810	ENSMAMG00000010641	prpf38b	98	92.810	Mastacembelus_armatus
ENSPNYG00000007625	prpf38b	100	99.783	ENSMZEG00005025536	prpf38b	100	99.783	Maylandia_zebra
ENSPNYG00000007625	prpf38b	98	92.576	ENSSPAG00000023160	-	98	91.266	Stegastes_partitus