EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPNYG00000007643 (Gene tree)
Gene ID: 102211183
Gene Symbol: smg7
Alias: fa99h10|wu:fa99h10
Full Name: SMG7%2C nonsense mediated mRNA decay factor
Gene Type: protein_coding
Species: Pundamilia_nyererei
Status: putative
Strand: Minus strand
Length: 21126 bases
Position: chrJH419512.1:116227-137352
Accession: 102211183
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPNYP00000010163	EST1	PF10374.9	1.5e-25	1	1
ENSPNYP00000010141	EST1	PF10374.9	1.5e-25	1	1
ENSPNYP00000010116	EST1	PF10374.9	1.6e-25	1	1
ENSPNYP00000010141	EST1_DNA_bind	PF10373.9	3.6e-48	1	1
ENSPNYP00000010116	EST1_DNA_bind	PF10373.9	3.9e-48	1	1
ENSPNYP00000010163	EST1_DNA_bind	PF10373.9	6.1e-42	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPNYT00000010391	-	7276	XM_005751334	ENSPNYP00000010141	1134 (aa)	XP_005751391	-
ENSPNYT00000010413	-	3354	-	ENSPNYP00000010163	1117 (aa)	-	-
ENSPNYT00000010366	-	7426	XM_005751332	ENSPNYP00000010116	1184 (aa)	XP_005751389	-

Gene Model

Click here to download ENSPNYG00000007643's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPNYG00000007643's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPNYG00000007643	smg7	99	66.179	ENSG00000116698	SMG7	86	94.340	Homo_sapiens
ENSPNYG00000007643	smg7	89	94.345	ENSAPOG00000009611	smg7	96	94.345	Acanthochromis_polyacanthus
ENSPNYG00000007643	smg7	99	65.285	ENSAMEG00000002357	SMG7	100	64.966	Ailuropoda_melanoleuca
ENSPNYG00000007643	smg7	97	87.658	ENSACIG00000015152	smg7	100	88.288	Amphilophus_citrinellus
ENSPNYG00000007643	smg7	100	90.628	ENSAOCG00000013538	smg7	100	92.552	Amphiprion_ocellaris
ENSPNYG00000007643	smg7	100	90.217	ENSAPEG00000007851	smg7	100	92.140	Amphiprion_percula
ENSPNYG00000007643	smg7	100	89.295	ENSATEG00000006931	smg7	100	89.382	Anabas_testudineus
ENSPNYG00000007643	smg7	93	71.859	ENSAPLG00000015811	SMG7	99	65.318	Anas_platyrhynchos
ENSPNYG00000007643	smg7	99	65.444	ENSACAG00000014989	SMG7	99	65.548	Anolis_carolinensis
ENSPNYG00000007643	smg7	99	65.896	ENSANAG00000028114	SMG7	85	94.231	Aotus_nancymaae
ENSPNYG00000007643	smg7	100	99.195	ENSACLG00000022079	smg7	100	99.195	Astatotilapia_calliptera
ENSPNYG00000007643	smg7	100	77.090	ENSAMXG00000020809	smg7	100	77.076	Astyanax_mexicanus
ENSPNYG00000007643	smg7	99	66.523	ENSBTAG00000008003	SMG7	99	66.093	Bos_taurus
ENSPNYG00000007643	smg7	99	65.722	ENSCJAG00000005135	SMG7	89	91.358	Callithrix_jacchus
ENSPNYG00000007643	smg7	99	64.268	ENSCAFG00000013276	SMG7	97	64.162	Canis_familiaris
ENSPNYG00000007643	smg7	99	65.437	ENSCAFG00020015475	SMG7	89	90.244	Canis_lupus_dingo
ENSPNYG00000007643	smg7	100	64.822	ENSCHIG00000018192	SMG7	99	64.575	Capra_hircus
ENSPNYG00000007643	smg7	99	66.094	ENSTSYG00000002667	SMG7	81	94.268	Carlito_syrichta
ENSPNYG00000007643	smg7	99	64.433	ENSCPOG00000008906	SMG7	99	63.734	Cavia_porcellus
ENSPNYG00000007643	smg7	99	66.064	ENSCCAG00000028596	SMG7	85	94.231	Cebus_capucinus
ENSPNYG00000007643	smg7	99	66.265	ENSCATG00000011063	SMG7	85	94.231	Cercocebus_atys
ENSPNYG00000007643	smg7	99	66.007	ENSCLAG00000010751	SMG7	99	65.663	Chinchilla_lanigera
ENSPNYG00000007643	smg7	99	64.633	ENSCSAG00000012654	SMG7	97	64.439	Chlorocebus_sabaeus
ENSPNYG00000007643	smg7	92	57.475	ENSCHOG00000010522	SMG7	93	57.475	Choloepus_hoffmanni
ENSPNYG00000007643	smg7	99	67.238	ENSCPBG00000015724	SMG7	99	66.695	Chrysemys_picta_bellii
ENSPNYG00000007643	smg7	99	66.064	ENSCANG00000015680	SMG7	85	94.231	Colobus_angolensis_palliatus
ENSPNYG00000007643	smg7	99	65.150	ENSCGRG00001013705	Smg7	99	65.322	Cricetulus_griseus_chok1gshd
ENSPNYG00000007643	smg7	99	65.000	ENSCGRG00000018401	Smg7	100	65.172	Cricetulus_griseus_crigri
ENSPNYG00000007643	smg7	99	81.497	ENSCVAG00000011842	smg7	100	83.582	Cyprinodon_variegatus
ENSPNYG00000007643	smg7	100	76.583	ENSDARG00000060767	smg7	100	76.987	Danio_rerio
ENSPNYG00000007643	smg7	99	64.457	ENSDORG00000007331	Smg7	99	64.126	Dipodomys_ordii
ENSPNYG00000007643	smg7	97	63.761	ENSETEG00000002654	SMG7	99	62.975	Echinops_telfairi
ENSPNYG00000007643	smg7	99	65.012	ENSEASG00005006524	SMG7	99	65.012	Equus_asinus_asinus
ENSPNYG00000007643	smg7	94	88.358	ENSECAG00000004313	SMG7	97	88.131	Equus_caballus
ENSPNYG00000007643	smg7	97	63.792	ENSEEUG00000002024	SMG7	94	63.243	Erinaceus_europaeus
ENSPNYG00000007643	smg7	100	78.495	ENSELUG00000010293	smg7	100	78.630	Esox_lucius
ENSPNYG00000007643	smg7	94	70.531	ENSFCAG00000010900	SMG7	99	70.531	Felis_catus
ENSPNYG00000007643	smg7	99	63.933	ENSFALG00000003047	SMG7	100	64.495	Ficedula_albicollis
ENSPNYG00000007643	smg7	99	64.540	ENSFDAG00000012121	SMG7	99	63.433	Fukomys_damarensis
ENSPNYG00000007643	smg7	100	82.548	ENSFHEG00000011073	smg7	100	82.726	Fundulus_heteroclitus
ENSPNYG00000007643	smg7	89	81.391	ENSGMOG00000004916	smg7	91	81.391	Gadus_morhua
ENSPNYG00000007643	smg7	93	71.859	ENSGALG00000004667	SMG7	99	65.952	Gallus_gallus
ENSPNYG00000007643	smg7	100	81.953	ENSGAFG00000019000	smg7	100	81.873	Gambusia_affinis
ENSPNYG00000007643	smg7	97	81.916	ENSGACG00000001634	smg7	99	82.337	Gasterosteus_aculeatus
ENSPNYG00000007643	smg7	99	66.352	ENSGGOG00000002342	SMG7	82	91.875	Gorilla_gorilla
ENSPNYG00000007643	smg7	100	99.410	ENSHBUG00000003726	smg7	100	99.410	Haplochromis_burtoni
ENSPNYG00000007643	smg7	99	66.180	ENSHGLG00000009353	SMG7	99	65.893	Heterocephalus_glaber_female
ENSPNYG00000007643	smg7	99	66.094	ENSHGLG00100009637	-	99	65.808	Heterocephalus_glaber_male
ENSPNYG00000007643	smg7	99	59.421	ENSHGLG00100004878	-	99	58.974	Heterocephalus_glaber_male
ENSPNYG00000007643	smg7	100	76.174	ENSIPUG00000016997	smg7	100	76.762	Ictalurus_punctatus
ENSPNYG00000007643	smg7	99	64.954	ENSSTOG00000000401	SMG7	99	64.016	Ictidomys_tridecemlineatus
ENSPNYG00000007643	smg7	99	64.842	ENSJJAG00000012351	Smg7	99	63.905	Jaculus_jaculus
ENSPNYG00000007643	smg7	91	86.500	ENSKMAG00000004900	smg7	98	86.500	Kryptolebias_marmoratus
ENSPNYG00000007643	smg7	99	87.139	ENSLBEG00000002983	smg7	99	86.964	Labrus_bergylta
ENSPNYG00000007643	smg7	52	78.894	ENSLBEG00000005220	-	75	78.894	Labrus_bergylta
ENSPNYG00000007643	smg7	100	68.293	ENSLACG00000000972	SMG7	100	68.653	Latimeria_chalumnae
ENSPNYG00000007643	smg7	99	71.228	ENSLOCG00000002010	smg7	99	71.146	Lepisosteus_oculatus
ENSPNYG00000007643	smg7	99	64.677	ENSLAFG00000008186	SMG7	99	64.398	Loxodonta_africana
ENSPNYG00000007643	smg7	99	65.041	ENSMFAG00000031653	SMG7	85	94.231	Macaca_fascicularis
ENSPNYG00000007643	smg7	99	65.264	ENSMMUG00000018458	SMG7	99	64.988	Macaca_mulatta
ENSPNYG00000007643	smg7	99	66.265	ENSMNEG00000034798	SMG7	85	94.231	Macaca_nemestrina
ENSPNYG00000007643	smg7	99	66.265	ENSMLEG00000037170	SMG7	100	64.996	Mandrillus_leucophaeus
ENSPNYG00000007643	smg7	88	86.805	ENSMAMG00000018733	smg7	86	87.370	Mastacembelus_armatus
ENSPNYG00000007643	smg7	100	99.016	ENSMZEG00005015247	smg7	100	99.016	Maylandia_zebra
ENSPNYG00000007643	smg7	99	64.935	ENSMGAG00000001561	SMG7	99	65.544	Meleagris_gallopavo
ENSPNYG00000007643	smg7	99	64.979	ENSMAUG00000019484	Smg7	99	65.064	Mesocricetus_auratus
ENSPNYG00000007643	smg7	99	66.151	ENSMICG00000007145	SMG7	81	94.231	Microcebus_murinus
ENSPNYG00000007643	smg7	99	65.322	ENSMOCG00000020748	Smg7	99	64.777	Microtus_ochrogaster
ENSPNYG00000007643	smg7	99	81.604	ENSMMOG00000001524	smg7	98	86.432	Mola_mola
ENSPNYG00000007643	smg7	92	65.856	ENSMODG00000007139	SMG7	99	64.279	Monodelphis_domestica
ENSPNYG00000007643	smg7	100	87.836	ENSMALG00000000061	smg7	94	88.000	Monopterus_albus
ENSPNYG00000007643	smg7	99	65.837	MGP_CAROLIEiJ_G0014704	Smg7	99	64.621	Mus_caroli
ENSPNYG00000007643	smg7	99	65.064	ENSMUSG00000042772	Smg7	99	65.150	Mus_musculus
ENSPNYG00000007643	smg7	99	65.292	MGP_PahariEiJ_G0027940	Smg7	99	65.378	Mus_pahari
ENSPNYG00000007643	smg7	99	65.150	MGP_SPRETEiJ_G0015511	Smg7	99	65.236	Mus_spretus
ENSPNYG00000007643	smg7	98	64.238	ENSMPUG00000011732	SMG7	97	64.405	Mustela_putorius_furo
ENSPNYG00000007643	smg7	99	64.179	ENSMLUG00000015417	SMG7	99	64.262	Myotis_lucifugus
ENSPNYG00000007643	smg7	100	65.411	ENSNGAG00000009836	Smg7	100	65.497	Nannospalax_galili
ENSPNYG00000007643	smg7	98	90.990	ENSNBRG00000024343	smg7	99	90.990	Neolamprologus_brichardi
ENSPNYG00000007643	smg7	99	66.351	ENSNLEG00000018018	SMG7	100	65.081	Nomascus_leucogenys
ENSPNYG00000007643	smg7	71	65.341	ENSMEUG00000004681	SMG7	73	65.341	Notamacropus_eugenii
ENSPNYG00000007643	smg7	96	59.551	ENSOPRG00000013942	SMG7	96	59.637	Ochotona_princeps
ENSPNYG00000007643	smg7	99	65.749	ENSODEG00000010390	SMG7	99	65.464	Octodon_degus
ENSPNYG00000007643	smg7	100	98.335	ENSONIG00000000277	smg7	100	98.335	Oreochromis_niloticus
ENSPNYG00000007643	smg7	99	63.743	ENSOANG00000000994	SMG7	100	63.826	Ornithorhynchus_anatinus
ENSPNYG00000007643	smg7	99	61.877	ENSOCUG00000005887	SMG7	92	62.272	Oryctolagus_cuniculus
ENSPNYG00000007643	smg7	100	80.101	ENSORLG00000007314	smg7	100	80.688	Oryzias_latipes
ENSPNYG00000007643	smg7	100	80.521	ENSORLG00020015779	smg7	100	81.108	Oryzias_latipes_hni
ENSPNYG00000007643	smg7	100	80.772	ENSORLG00015012289	smg7	100	80.856	Oryzias_latipes_hsok
ENSPNYG00000007643	smg7	100	80.605	ENSOMEG00000002328	smg7	100	81.360	Oryzias_melastigma
ENSPNYG00000007643	smg7	97	63.442	ENSOGAG00000003107	SMG7	93	63.365	Otolemur_garnettii
ENSPNYG00000007643	smg7	99	65.035	ENSOARG00000001352	SMG7	100	64.773	Ovis_aries
ENSPNYG00000007643	smg7	99	66.266	ENSPPAG00000031619	SMG7	89	90.798	Pan_paniscus
ENSPNYG00000007643	smg7	99	65.805	ENSPPRG00000011222	SMG7	99	66.294	Panthera_pardus
ENSPNYG00000007643	smg7	97	64.821	ENSPTIG00000007242	SMG7	100	65.306	Panthera_tigris_altaica
ENSPNYG00000007643	smg7	99	66.266	ENSPTRG00000001764	SMG7	85	94.231	Pan_troglodytes
ENSPNYG00000007643	smg7	99	66.265	ENSPANG00000004520	SMG7	99	65.893	Papio_anubis
ENSPNYG00000007643	smg7	100	71.429	ENSPKIG00000007242	smg7	100	71.930	Paramormyrops_kingsleyae
ENSPNYG00000007643	smg7	99	66.290	ENSPSIG00000012201	SMG7	100	65.195	Pelodiscus_sinensis
ENSPNYG00000007643	smg7	66	57.000	ENSPMGG00000021833	smg7	97	50.964	Periophthalmus_magnuspinnatus
ENSPNYG00000007643	smg7	99	65.048	ENSPEMG00000011315	Smg7	99	64.788	Peromyscus_maniculatus_bairdii
ENSPNYG00000007643	smg7	99	66.179	ENSPCIG00000003786	SMG7	89	93.750	Phascolarctos_cinereus
ENSPNYG00000007643	smg7	100	82.358	ENSPFOG00000019219	smg7	100	82.529	Poecilia_formosa
ENSPNYG00000007643	smg7	100	82.199	ENSPLAG00000001446	smg7	100	82.378	Poecilia_latipinna
ENSPNYG00000007643	smg7	97	81.695	ENSPMEG00000005218	smg7	99	81.883	Poecilia_mexicana
ENSPNYG00000007643	smg7	88	78.988	ENSPREG00000019039	smg7	92	79.294	Poecilia_reticulata
ENSPNYG00000007643	smg7	99	66.351	ENSPPYG00000000427	SMG7	99	65.979	Pongo_abelii
ENSPNYG00000007643	smg7	84	72.648	ENSPCAG00000008360	SMG7	86	72.648	Procavia_capensis
ENSPNYG00000007643	smg7	99	65.142	ENSPCOG00000011996	SMG7	76	94.231	Propithecus_coquereli
ENSPNYG00000007643	smg7	91	60.180	ENSPVAG00000000851	SMG7	89	60.270	Pteropus_vampyrus
ENSPNYG00000007643	smg7	100	76.167	ENSPNAG00000011374	smg7	100	76.325	Pygocentrus_nattereri
ENSPNYG00000007643	smg7	99	65.408	ENSRNOG00000027962	Smg7	99	65.767	Rattus_norvegicus
ENSPNYG00000007643	smg7	99	66.265	ENSRBIG00000036316	SMG7	100	64.996	Rhinopithecus_bieti
ENSPNYG00000007643	smg7	99	66.265	ENSRROG00000035719	SMG7	100	64.996	Rhinopithecus_roxellana
ENSPNYG00000007643	smg7	99	64.599	ENSSBOG00000023454	SMG7	86	94.340	Saimiri_boliviensis_boliviensis
ENSPNYG00000007643	smg7	100	65.523	ENSSHAG00000013147	SMG7	99	64.821	Sarcophilus_harrisii
ENSPNYG00000007643	smg7	100	75.125	ENSSFOG00015017252	smg7	100	74.752	Scleropages_formosus
ENSPNYG00000007643	smg7	100	85.173	ENSSMAG00000006067	smg7	100	86.242	Scophthalmus_maximus
ENSPNYG00000007643	smg7	96	96.000	ENSSDUG00000017543	smg7	100	90.468	Seriola_dumerili
ENSPNYG00000007643	smg7	99	65.277	ENSSPUG00000002064	SMG7	99	64.656	Sphenodon_punctatus
ENSPNYG00000007643	smg7	99	87.139	ENSSPAG00000008733	smg7	99	87.773	Stegastes_partitus
ENSPNYG00000007643	smg7	99	64.711	ENSSSCG00000015558	SMG7	99	64.797	Sus_scrofa
ENSPNYG00000007643	smg7	99	65.371	ENSTGUG00000003928	SMG7	100	65.978	Taeniopygia_guttata
ENSPNYG00000007643	smg7	100	74.505	ENSTNIG00000002802	smg7	100	73.633	Tetraodon_nigroviridis
ENSPNYG00000007643	smg7	78	68.000	ENSTBEG00000003220	SMG7	75	68.000	Tupaia_belangeri
ENSPNYG00000007643	smg7	96	63.784	ENSTTRG00000014778	SMG7	94	63.955	Tursiops_truncatus
ENSPNYG00000007643	smg7	96	63.450	ENSUAMG00000017473	SMG7	100	63.961	Ursus_americanus
ENSPNYG00000007643	smg7	97	63.473	ENSUMAG00000016389	SMG7	100	63.962	Ursus_maritimus
ENSPNYG00000007643	smg7	94	69.565	ENSVVUG00000008976	SMG7	99	69.565	Vulpes_vulpes
ENSPNYG00000007643	smg7	99	60.578	ENSXETG00000012528	smg7	99	60.663	Xenopus_tropicalis
ENSPNYG00000007643	smg7	100	81.921	ENSXMAG00000007123	smg7	100	82.071	Xiphophorus_maculatus