EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPNYG00000007785 (Gene tree)
Gene ID: -
Gene Symbol: srrm4
Alias: ZnSR100|im:7136231|si:dkey-1k23.1
Full Name: serine/arginine repetitive matrix 4
Gene Type: protein_coding
Species: Pundamilia_nyererei
Status: putative
Strand: Minus strand
Length: 61633 bases
Position: chrJH419332.1:292528-354160
Accession: ZDB-GENE-050208-34
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPNYP00000010244	SRRM_C	PF15230.6	6.2e-25	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPNYT00000010497	-	1335	-	ENSPNYP00000010244	444 (aa)	-	-

Gene Model

Click here to download ENSPNYG00000007785's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPNYG00000007785's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPNYG00000007785	srrm4	98	76.959	ENSACIG00000002171	srrm4	92	78.111	Amphilophus_citrinellus
ENSPNYG00000007785	srrm4	82	92.857	ENSATEG00000005330	srrm4	91	92.857	Anabas_testudineus
ENSPNYG00000007785	srrm4	100	95.787	ENSACLG00000023532	srrm4	100	95.787	Astatotilapia_calliptera
ENSPNYG00000007785	srrm4	96	53.075	ENSCSEG00000007689	-	88	50.765	Cynoglossus_semilaevis
ENSPNYG00000007785	srrm4	80	43.029	ENSELUG00000004986	srrm4	54	59.786	Esox_lucius
ENSPNYG00000007785	srrm4	73	68.468	ENSFHEG00000005091	srrm4	86	66.667	Fundulus_heteroclitus
ENSPNYG00000007785	srrm4	62	46.602	ENSGMOG00000006714	srrm4	56	51.636	Gadus_morhua
ENSPNYG00000007785	srrm4	98	58.057	ENSGAFG00000006706	srrm4	98	55.381	Gambusia_affinis
ENSPNYG00000007785	srrm4	81	100.000	ENSHBUG00000010505	srrm4	70	87.896	Haplochromis_burtoni
ENSPNYG00000007785	srrm4	69	94.444	ENSKMAG00000001873	srrm4	62	94.444	Kryptolebias_marmoratus
ENSPNYG00000007785	srrm4	98	63.901	ENSMAMG00000004280	srrm4	98	62.108	Mastacembelus_armatus
ENSPNYG00000007785	srrm4	100	95.787	ENSMZEG00005021733	srrm4	100	95.787	Maylandia_zebra
ENSPNYG00000007785	srrm4	98	64.302	ENSMMOG00000000228	srrm4	98	61.726	Mola_mola
ENSPNYG00000007785	srrm4	100	91.423	ENSNBRG00000015313	srrm4	100	91.423	Neolamprologus_brichardi
ENSPNYG00000007785	srrm4	73	85.393	ENSONIG00000010552	srrm4	70	85.955	Oreochromis_niloticus
ENSPNYG00000007785	srrm4	80	76.471	ENSORLG00020009749	srrm4	93	48.842	Oryzias_latipes_hni
ENSPNYG00000007785	srrm4	98	55.157	ENSPMGG00000008387	srrm4	61	56.884	Periophthalmus_magnuspinnatus
ENSPNYG00000007785	srrm4	98	61.438	ENSPLAG00000002006	srrm4	99	57.516	Poecilia_latipinna
ENSPNYG00000007785	srrm4	98	61.470	ENSPMEG00000017802	srrm4	88	97.143	Poecilia_mexicana
ENSPNYG00000007785	srrm4	98	61.269	ENSPREG00000004567	srrm4	83	84.615	Poecilia_reticulata
ENSPNYG00000007785	srrm4	98	58.405	ENSSMAG00000012257	srrm4	78	94.118	Scophthalmus_maximus
ENSPNYG00000007785	srrm4	98	69.474	ENSSDUG00000017519	srrm4	99	72.619	Seriola_dumerili
ENSPNYG00000007785	srrm4	74	77.233	ENSSLDG00000015130	srrm4	77	75.793	Seriola_lalandi_dorsalis
ENSPNYG00000007785	srrm4	99	72.314	ENSSPAG00000016190	srrm4	99	78.209	Stegastes_partitus
ENSPNYG00000007785	srrm4	81	97.143	ENSXMAG00000002658	srrm4	61	97.143	Xiphophorus_maculatus