EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPNYG00000007938 (Gene tree)
Gene ID: 102192547
Gene Symbol: larp1
Alias: wu:fb92d03|wu:fd15e07
Full Name: La ribonucleoprotein domain family member 1
Gene Type: protein_coding
Species: Pundamilia_nyererei
Status: putative
Strand: Minus strand
Length: 49092 bases
Position: chrJH419424.1:219086-268177
Accession: 102192547
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPNYP00000010472	La	PF05383.17	1.4e-20	1	1
ENSPNYP00000010444	La	PF05383.17	1.4e-20	1	1
ENSPNYP00000010568	La	PF05383.17	1.5e-20	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPNYT00000010699	-	6734	XM_005748305	ENSPNYP00000010444	1114 (aa)	XP_005748362	UPI0006AA938B
ENSPNYT00000010824	-	6063	-	ENSPNYP00000010568	983 (aa)	-	-
ENSPNYT00000010727	-	6662	XM_013914717	ENSPNYP00000010472	1090 (aa)	XP_013770171	UPI0006AABFDF

Gene Model

Click here to download ENSPNYG00000007938's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPNYG00000007938's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPNYG00000007938	larp1	73	59.891	ENSPNYG00000017357	larp1b	93	58.778

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPNYG00000007938	larp1	98	67.271	ENSG00000155506	LARP1	90	81.818	Homo_sapiens
ENSPNYG00000007938	larp1	87	97.235	ENSAPOG00000020685	larp1	99	97.235	Acanthochromis_polyacanthus
ENSPNYG00000007938	larp1	98	67.538	ENSAMEG00000016673	LARP1	99	68.405	Ailuropoda_melanoleuca
ENSPNYG00000007938	larp1	100	83.424	ENSACIG00000012994	larp1	100	82.240	Amphilophus_citrinellus
ENSPNYG00000007938	larp1	87	93.333	ENSAOCG00000007792	larp1	100	93.333	Amphiprion_ocellaris
ENSPNYG00000007938	larp1	99	93.177	ENSAPEG00000022246	larp1	100	90.664	Amphiprion_percula
ENSPNYG00000007938	larp1	98	92.141	ENSATEG00000013523	larp1	100	90.170	Anabas_testudineus
ENSPNYG00000007938	larp1	92	70.406	ENSAPLG00000007559	LARP1	99	72.222	Anas_platyrhynchos
ENSPNYG00000007938	larp1	98	68.969	ENSACAG00000004071	LARP1	97	72.333	Anolis_carolinensis
ENSPNYG00000007938	larp1	98	66.767	ENSANAG00000029949	LARP1	99	65.612	Aotus_nancymaae
ENSPNYG00000007938	larp1	100	99.797	ENSACLG00000015256	larp1	100	99.797	Astatotilapia_calliptera
ENSPNYG00000007938	larp1	96	80.465	ENSAMXG00000000859	larp1	98	76.808	Astyanax_mexicanus
ENSPNYG00000007938	larp1	95	68.257	ENSBTAG00000008443	LARP1	99	63.121	Bos_taurus
ENSPNYG00000007938	larp1	98	67.170	ENSCJAG00000004454	LARP1	99	63.604	Callithrix_jacchus
ENSPNYG00000007938	larp1	98	67.638	ENSCAFG00000017639	LARP1	99	68.507	Canis_familiaris
ENSPNYG00000007938	larp1	90	70.077	ENSCAFG00020023860	LARP1	99	69.836	Canis_lupus_dingo
ENSPNYG00000007938	larp1	95	68.050	ENSCHIG00000014414	LARP1	99	61.731	Capra_hircus
ENSPNYG00000007938	larp1	98	67.472	ENSTSYG00000013732	LARP1	98	66.016	Carlito_syrichta
ENSPNYG00000007938	larp1	85	68.845	ENSCAPG00000013865	LARP1	86	68.208	Cavia_aperea
ENSPNYG00000007938	larp1	96	68.524	ENSCPOG00000003377	LARP1	99	68.238	Cavia_porcellus
ENSPNYG00000007938	larp1	98	67.069	ENSCCAG00000025201	LARP1	99	63.313	Cebus_capucinus
ENSPNYG00000007938	larp1	98	67.170	ENSCATG00000030675	LARP1	99	61.607	Cercocebus_atys
ENSPNYG00000007938	larp1	98	67.907	ENSCLAG00000012755	LARP1	99	66.940	Chinchilla_lanigera
ENSPNYG00000007938	larp1	90	67.108	ENSCSAG00000010800	LARP1	98	67.367	Chlorocebus_sabaeus
ENSPNYG00000007938	larp1	91	64.589	ENSCHOG00000012716	LARP1	90	64.589	Choloepus_hoffmanni
ENSPNYG00000007938	larp1	99	70.991	ENSCPBG00000002173	LARP1	93	72.216	Chrysemys_picta_bellii
ENSPNYG00000007938	larp1	98	67.573	ENSCANG00000037418	LARP1	92	68.340	Colobus_angolensis_palliatus
ENSPNYG00000007938	larp1	98	67.103	ENSCGRG00001016913	Larp1	99	64.004	Cricetulus_griseus_chok1gshd
ENSPNYG00000007938	larp1	95	64.817	ENSCGRG00000009916	Larp1	99	65.778	Cricetulus_griseus_crigri
ENSPNYG00000007938	larp1	99	90.946	ENSCSEG00000016431	larp1	100	87.740	Cynoglossus_semilaevis
ENSPNYG00000007938	larp1	98	88.406	ENSCVAG00000022687	larp1	100	86.418	Cyprinodon_variegatus
ENSPNYG00000007938	larp1	99	71.955	ENSDARG00000101722	larp1	95	73.143	Danio_rerio
ENSPNYG00000007938	larp1	98	67.170	ENSDNOG00000012073	LARP1	99	63.458	Dasypus_novemcinctus
ENSPNYG00000007938	larp1	98	63.490	ENSDORG00000002897	Larp1	97	65.744	Dipodomys_ordii
ENSPNYG00000007938	larp1	92	68.575	ENSETEG00000020251	LARP1	100	69.747	Echinops_telfairi
ENSPNYG00000007938	larp1	98	67.236	ENSEASG00005001070	LARP1	99	63.345	Equus_asinus_asinus
ENSPNYG00000007938	larp1	98	67.236	ENSECAG00000017002	LARP1	78	64.373	Equus_caballus
ENSPNYG00000007938	larp1	93	64.831	ENSEEUG00000001065	LARP1	99	65.550	Erinaceus_europaeus
ENSPNYG00000007938	larp1	98	81.263	ENSELUG00000019403	larp1	99	78.519	Esox_lucius
ENSPNYG00000007938	larp1	98	67.337	ENSFCAG00000000592	LARP1	99	63.822	Felis_catus
ENSPNYG00000007938	larp1	86	73.176	ENSFALG00000008335	LARP1	99	73.765	Ficedula_albicollis
ENSPNYG00000007938	larp1	98	67.505	ENSFDAG00000021125	LARP1	99	68.270	Fukomys_damarensis
ENSPNYG00000007938	larp1	63	79.429	ENSFHEG00000020307	larp1	97	78.429	Fundulus_heteroclitus
ENSPNYG00000007938	larp1	99	70.226	ENSGALG00000040109	LARP1	97	71.779	Gallus_gallus
ENSPNYG00000007938	larp1	99	70.251	ENSGAGG00000025113	LARP1	98	72.867	Gopherus_agassizii
ENSPNYG00000007938	larp1	98	67.271	ENSGGOG00000006048	LARP1	94	67.339	Gorilla_gorilla
ENSPNYG00000007938	larp1	100	99.102	ENSHBUG00000020762	larp1	100	99.102	Haplochromis_burtoni
ENSPNYG00000007938	larp1	96	67.385	ENSHGLG00000006267	LARP1	99	62.867	Heterocephalus_glaber_female
ENSPNYG00000007938	larp1	96	58.689	ENSHGLG00100003395	-	90	58.409	Heterocephalus_glaber_male
ENSPNYG00000007938	larp1	98	67.236	ENSHGLG00100014230	-	99	67.996	Heterocephalus_glaber_male
ENSPNYG00000007938	larp1	90	92.961	ENSHCOG00000010786	larp1	99	92.961	Hippocampus_comes
ENSPNYG00000007938	larp1	96	74.947	ENSIPUG00000019105	Larp1	94	78.033	Ictalurus_punctatus
ENSPNYG00000007938	larp1	98	64.819	ENSSTOG00000005678	LARP1	98	65.744	Ictidomys_tridecemlineatus
ENSPNYG00000007938	larp1	98	63.498	ENSJJAG00000016950	Larp1	99	60.307	Jaculus_jaculus
ENSPNYG00000007938	larp1	99	89.409	ENSKMAG00000018468	larp1	99	89.511	Kryptolebias_marmoratus
ENSPNYG00000007938	larp1	99	88.450	ENSLBEG00000027172	larp1	100	86.339	Labrus_bergylta
ENSPNYG00000007938	larp1	92	79.080	ENSLOCG00000012457	larp1	99	76.000	Lepisosteus_oculatus
ENSPNYG00000007938	larp1	98	66.129	ENSLAFG00000008991	LARP1	99	62.826	Loxodonta_africana
ENSPNYG00000007938	larp1	98	67.170	ENSMFAG00000031651	LARP1	92	68.033	Macaca_fascicularis
ENSPNYG00000007938	larp1	98	64.747	ENSMMUG00000009411	LARP1	99	65.776	Macaca_mulatta
ENSPNYG00000007938	larp1	91	69.172	ENSMNEG00000039294	LARP1	99	69.332	Macaca_nemestrina
ENSPNYG00000007938	larp1	98	67.271	ENSMLEG00000035142	LARP1	92	68.135	Mandrillus_leucophaeus
ENSPNYG00000007938	larp1	99	91.870	ENSMAMG00000021788	larp1	100	89.247	Mastacembelus_armatus
ENSPNYG00000007938	larp1	100	99.797	ENSMZEG00005009345	larp1	100	99.797	Maylandia_zebra
ENSPNYG00000007938	larp1	98	69.614	ENSMGAG00000005696	LARP1	99	71.222	Meleagris_gallopavo
ENSPNYG00000007938	larp1	98	67.203	ENSMAUG00000001385	Larp1	99	64.183	Mesocricetus_auratus
ENSPNYG00000007938	larp1	98	66.165	ENSMICG00000000837	LARP1	98	69.536	Microcebus_murinus
ENSPNYG00000007938	larp1	98	67.203	ENSMOCG00000008920	Larp1	99	64.061	Microtus_ochrogaster
ENSPNYG00000007938	larp1	94	67.484	ENSMMOG00000013364	larp1	99	68.709	Mola_mola
ENSPNYG00000007938	larp1	98	67.134	ENSMODG00000008663	LARP1	98	68.400	Monodelphis_domestica
ENSPNYG00000007938	larp1	99	91.752	ENSMALG00000017180	larp1	100	87.792	Monopterus_albus
ENSPNYG00000007938	larp1	98	67.103	MGP_CAROLIEiJ_G0016383	Larp1	99	64.420	Mus_caroli
ENSPNYG00000007938	larp1	98	67.203	ENSMUSG00000037331	Larp1	99	64.510	Mus_musculus
ENSPNYG00000007938	larp1	98	67.203	MGP_PahariEiJ_G0017518	Larp1	99	64.363	Mus_pahari
ENSPNYG00000007938	larp1	98	67.203	MGP_SPRETEiJ_G0017225	Larp1	99	64.510	Mus_spretus
ENSPNYG00000007938	larp1	79	65.796	ENSMPUG00000013564	LARP1	99	61.349	Mustela_putorius_furo
ENSPNYG00000007938	larp1	98	64.164	ENSMLUG00000002608	LARP1	99	65.173	Myotis_lucifugus
ENSPNYG00000007938	larp1	98	65.538	ENSNGAG00000001098	Larp1	98	65.408	Nannospalax_galili
ENSPNYG00000007938	larp1	96	91.286	ENSNBRG00000008963	larp1	98	93.890	Neolamprologus_brichardi
ENSPNYG00000007938	larp1	98	66.599	ENSNLEG00000016588	LARP1	98	66.215	Nomascus_leucogenys
ENSPNYG00000007938	larp1	91	67.503	ENSMEUG00000002957	LARP1	99	65.262	Notamacropus_eugenii
ENSPNYG00000007938	larp1	98	67.137	ENSOPRG00000013014	LARP1	99	68.308	Ochotona_princeps
ENSPNYG00000007938	larp1	98	67.339	ENSODEG00000010824	LARP1	99	68.340	Octodon_degus
ENSPNYG00000007938	larp1	99	93.327	ENSONIG00000017308	larp1	100	93.268	Oreochromis_niloticus
ENSPNYG00000007938	larp1	99	68.876	ENSOANG00000005096	LARP1	99	68.818	Ornithorhynchus_anatinus
ENSPNYG00000007938	larp1	98	67.437	ENSOCUG00000013066	LARP1	99	64.004	Oryctolagus_cuniculus
ENSPNYG00000007938	larp1	100	87.182	ENSORLG00000000824	larp1	100	84.404	Oryzias_latipes
ENSPNYG00000007938	larp1	100	87.284	ENSORLG00020022241	larp1	100	84.404	Oryzias_latipes_hni
ENSPNYG00000007938	larp1	100	85.656	ENSORLG00015007538	larp1	100	84.404	Oryzias_latipes_hsok
ENSPNYG00000007938	larp1	99	85.845	ENSOMEG00000003134	larp1	100	83.394	Oryzias_melastigma
ENSPNYG00000007938	larp1	98	67.271	ENSOGAG00000016750	LARP1	99	68.033	Otolemur_garnettii
ENSPNYG00000007938	larp1	95	66.874	ENSOARG00000009893	LARP1	99	66.157	Ovis_aries
ENSPNYG00000007938	larp1	98	67.271	ENSPPAG00000042993	LARP1	92	68.135	Pan_paniscus
ENSPNYG00000007938	larp1	98	66.199	ENSPPRG00000009780	LARP1	93	66.530	Panthera_pardus
ENSPNYG00000007938	larp1	98	66.298	ENSPTIG00000007013	LARP1	93	67.042	Panthera_tigris_altaica
ENSPNYG00000007938	larp1	98	67.271	ENSPTRG00000017447	LARP1	99	61.607	Pan_troglodytes
ENSPNYG00000007938	larp1	98	67.170	ENSPANG00000008080	LARP1	99	61.607	Papio_anubis
ENSPNYG00000007938	larp1	96	70.539	ENSPKIG00000017153	-	99	68.544	Paramormyrops_kingsleyae
ENSPNYG00000007938	larp1	95	81.604	ENSPKIG00000010096	larp1	99	77.339	Paramormyrops_kingsleyae
ENSPNYG00000007938	larp1	94	82.251	ENSPMGG00000011599	larp1	98	79.264	Periophthalmus_magnuspinnatus
ENSPNYG00000007938	larp1	98	65.231	ENSPEMG00000022523	Larp1	98	65.440	Peromyscus_maniculatus_bairdii
ENSPNYG00000007938	larp1	95	69.843	ENSPCIG00000019242	LARP1	89	66.022	Phascolarctos_cinereus
ENSPNYG00000007938	larp1	99	86.077	ENSPFOG00000005836	larp1	100	83.229	Poecilia_formosa
ENSPNYG00000007938	larp1	99	85.772	ENSPLAG00000008936	larp1	100	83.774	Poecilia_latipinna
ENSPNYG00000007938	larp1	99	85.976	ENSPMEG00000013656	larp1	100	83.140	Poecilia_mexicana
ENSPNYG00000007938	larp1	99	85.671	ENSPREG00000005726	larp1	99	85.874	Poecilia_reticulata
ENSPNYG00000007938	larp1	97	64.539	ENSPCAG00000006407	LARP1	98	65.567	Procavia_capensis
ENSPNYG00000007938	larp1	98	60.222	ENSPCOG00000016949	LARP1	99	63.627	Propithecus_coquereli
ENSPNYG00000007938	larp1	96	68.210	ENSPVAG00000002262	LARP1	99	63.321	Pteropus_vampyrus
ENSPNYG00000007938	larp1	98	77.686	ENSPNAG00000021427	larp1	99	76.208	Pygocentrus_nattereri
ENSPNYG00000007938	larp1	98	64.653	ENSRNOG00000031544	Larp1	98	65.574	Rattus_norvegicus
ENSPNYG00000007938	larp1	98	67.271	ENSRBIG00000038005	LARP1	92	68.135	Rhinopithecus_bieti
ENSPNYG00000007938	larp1	98	67.271	ENSRROG00000034073	LARP1	99	69.441	Rhinopithecus_roxellana
ENSPNYG00000007938	larp1	98	67.306	ENSSBOG00000019816	LARP1	99	65.846	Saimiri_boliviensis_boliviensis
ENSPNYG00000007938	larp1	98	68.517	ENSSHAG00000011115	LARP1	99	69.681	Sarcophilus_harrisii
ENSPNYG00000007938	larp1	95	78.439	ENSSFOG00015020304	larp1	93	78.747	Scleropages_formosus
ENSPNYG00000007938	larp1	98	76.004	ENSSFOG00015018058	-	99	72.627	Scleropages_formosus
ENSPNYG00000007938	larp1	93	86.022	ENSSMAG00000007468	larp1	98	85.924	Scophthalmus_maximus
ENSPNYG00000007938	larp1	99	93.699	ENSSDUG00000000268	larp1	100	91.577	Seriola_dumerili
ENSPNYG00000007938	larp1	91	86.222	ENSSLDG00000016505	larp1	99	86.111	Seriola_lalandi_dorsalis
ENSPNYG00000007938	larp1	63	78.169	ENSSARG00000013907	-	88	78.521	Sorex_araneus
ENSPNYG00000007938	larp1	99	70.113	ENSSPUG00000012179	-	99	67.023	Sphenodon_punctatus
ENSPNYG00000007938	larp1	99	93.414	ENSSPAG00000003910	larp1	100	91.249	Stegastes_partitus
ENSPNYG00000007938	larp1	96	67.765	ENSSSCG00000017069	LARP1	99	69.180	Sus_scrofa
ENSPNYG00000007938	larp1	95	70.251	ENSTGUG00000000704	LARP1	100	71.672	Taeniopygia_guttata
ENSPNYG00000007938	larp1	99	87.894	ENSTRUG00000009470	larp1	99	85.662	Takifugu_rubripes
ENSPNYG00000007938	larp1	92	67.061	ENSTBEG00000003381	LARP1	99	67.798	Tupaia_belangeri
ENSPNYG00000007938	larp1	97	66.734	ENSTTRG00000015934	LARP1	99	67.821	Tursiops_truncatus
ENSPNYG00000007938	larp1	98	67.437	ENSUAMG00000019334	LARP1	99	63.556	Ursus_americanus
ENSPNYG00000007938	larp1	95	66.391	ENSUMAG00000002934	LARP1	96	69.085	Ursus_maritimus
ENSPNYG00000007938	larp1	90	70.077	ENSVVUG00000004644	LARP1	99	69.836	Vulpes_vulpes
ENSPNYG00000007938	larp1	98	70.988	ENSXETG00000008413	larp1	93	71.298	Xenopus_tropicalis
ENSPNYG00000007938	larp1	87	82.468	ENSXCOG00000004022	larp1	99	82.445	Xiphophorus_couchianus
ENSPNYG00000007938	larp1	99	85.671	ENSXMAG00000018780	larp1	100	82.857	Xiphophorus_maculatus