EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPNYG00000009079 (Gene tree)
Gene ID: 102210600
Gene Symbol: -
Alias: -
Full Name: RNA binding protein fox-1 homolog 3-like
Gene Type: protein_coding
Species: Pundamilia_nyererei
Status: putative
Strand: Plus strand
Length: 207466 bases
Position: chrJH419485.1:326487-533952
Accession: 102210600
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPNYP00000012000	Fox-1_C	PF12414.8	1.5e-25	1	2
ENSPNYP00000012000	Fox-1_C	PF12414.8	1.5e-25	2	2
ENSPNYP00000012006	Fox-1_C	PF12414.8	5.2e-25	1	2
ENSPNYP00000012006	Fox-1_C	PF12414.8	5.2e-25	2	2
ENSPNYP00000012000	RRM_1	PF00076.22	1.4e-18	1	1
ENSPNYP00000012006	RRM_1	PF00076.22	1.4e-18	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPNYT00000012292	-	1101	XM_005750608	ENSPNYP00000012000	366 (aa)	XP_005750665	-
ENSPNYT00000012298	-	1086	XM_005750609	ENSPNYP00000012006	361 (aa)	XP_005750666	-

Gene Model

Click here to download ENSPNYG00000009079's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPNYG00000009079's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPNYG00000009079	-	52	66.341	ENSPNYG00000020595	-	86	50.556
ENSPNYG00000009079	-	97	77.429	ENSPNYG00000010414	rbfox3b	100	77.077
ENSPNYG00000009079	-	56	63.913	ENSPNYG00000002098	rbfox1l	97	46.114
ENSPNYG00000009079	-	56	61.290	ENSPNYG00000016161	rbfox2	74	50.815

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPNYG00000009079	-	73	93.103	ENSG00000167281	RBFOX3	100	76.923	Homo_sapiens
ENSPNYG00000009079	-	97	77.027	ENSAPOG00000021630	rbfox3b	100	77.260	Acanthochromis_polyacanthus
ENSPNYG00000009079	-	100	75.339	ENSAPOG00000015658	-	94	76.374	Acanthochromis_polyacanthus
ENSPNYG00000009079	-	87	68.555	ENSAMEG00000014170	RBFOX3	90	68.839	Ailuropoda_melanoleuca
ENSPNYG00000009079	-	82	80.858	ENSACIG00000010817	rbfox3b	100	81.063	Amphilophus_citrinellus
ENSPNYG00000009079	-	80	82.555	ENSACIG00000003768	-	78	89.568	Amphilophus_citrinellus
ENSPNYG00000009079	-	99	90.083	ENSAOCG00000010786	-	100	90.083	Amphiprion_ocellaris
ENSPNYG00000009079	-	96	77.112	ENSAOCG00000012358	rbfox3b	100	77.260	Amphiprion_ocellaris
ENSPNYG00000009079	-	97	78.857	ENSAPEG00000019081	rbfox3b	100	78.286	Amphiprion_percula
ENSPNYG00000009079	-	88	82.609	ENSAPEG00000015891	-	89	82.609	Amphiprion_percula
ENSPNYG00000009079	-	80	79.612	ENSATEG00000023101	-	99	79.938	Anabas_testudineus
ENSPNYG00000009079	-	82	70.317	ENSATEG00000019945	rbfox3b	100	68.696	Anabas_testudineus
ENSPNYG00000009079	-	94	72.981	ENSACAG00000016093	RBFOX3	100	73.259	Anolis_carolinensis
ENSPNYG00000009079	-	71	93.333	ENSANAG00000023457	RBFOX3	100	73.567	Aotus_nancymaae
ENSPNYG00000009079	-	96	93.733	ENSACLG00000025552	-	100	93.733	Astatotilapia_calliptera
ENSPNYG00000009079	-	97	76.694	ENSACLG00000020011	rbfox3b	100	76.603	Astatotilapia_calliptera
ENSPNYG00000009079	-	93	73.596	ENSAMXG00000042841	rbfox3b	100	73.164	Astyanax_mexicanus
ENSPNYG00000009079	-	97	76.533	ENSAMXG00000037246	rbfox3a	100	78.763	Astyanax_mexicanus
ENSPNYG00000009079	-	73	93.103	ENSBTAG00000006280	RBFOX3	76	93.333	Bos_taurus
ENSPNYG00000009079	-	74	93.333	ENSCJAG00000009563	RBFOX3	78	93.333	Callithrix_jacchus
ENSPNYG00000009079	-	65	77.075	ENSCAFG00000005547	RBFOX3	89	77.470	Canis_familiaris
ENSPNYG00000009079	-	74	93.333	ENSCAFG00020008126	RBFOX3	76	88.235	Canis_lupus_dingo
ENSPNYG00000009079	-	74	93.333	ENSCHIG00000009124	RBFOX3	73	93.548	Capra_hircus
ENSPNYG00000009079	-	73	93.103	ENSTSYG00000029617	RBFOX3	78	93.333	Carlito_syrichta
ENSPNYG00000009079	-	74	93.333	ENSCPOG00000021703	RBFOX3	78	93.333	Cavia_porcellus
ENSPNYG00000009079	-	71	93.333	ENSCCAG00000028450	RBFOX3	100	73.567	Cebus_capucinus
ENSPNYG00000009079	-	77	77.622	ENSCATG00000018349	RBFOX3	100	74.204	Cercocebus_atys
ENSPNYG00000009079	-	77	87.805	ENSCLAG00000006449	RBFOX3	78	93.333	Chinchilla_lanigera
ENSPNYG00000009079	-	77	72.910	ENSCSAG00000002355	RBFOX3	100	74.204	Chlorocebus_sabaeus
ENSPNYG00000009079	-	85	74.233	ENSCPBG00000010904	RBFOX3	100	74.679	Chrysemys_picta_bellii
ENSPNYG00000009079	-	71	93.333	ENSCANG00000043120	RBFOX3	100	74.204	Colobus_angolensis_palliatus
ENSPNYG00000009079	-	73	86.207	ENSCGRG00001019476	Rbfox3	78	86.667	Cricetulus_griseus_chok1gshd
ENSPNYG00000009079	-	73	86.207	ENSCGRG00000003268	Rbfox3	78	86.667	Cricetulus_griseus_crigri
ENSPNYG00000009079	-	98	88.022	ENSCSEG00000015567	RBFOX3	99	88.022	Cynoglossus_semilaevis
ENSPNYG00000009079	-	96	63.441	ENSCSEG00000020606	RBFOX3	100	63.043	Cynoglossus_semilaevis
ENSPNYG00000009079	-	93	76.243	ENSCVAG00000006882	rbfox3b	98	76.389	Cyprinodon_variegatus
ENSPNYG00000009079	-	83	72.638	ENSDARG00000074310	rbfox3b	97	72.131	Danio_rerio
ENSPNYG00000009079	-	96	76.550	ENSDARG00000010083	rbfox3a	100	78.976	Danio_rerio
ENSPNYG00000009079	-	59	93.103	ENSDNOG00000039391	RBFOX3	77	71.111	Dasypus_novemcinctus
ENSPNYG00000009079	-	77	87.805	ENSDORG00000005352	Rbfox3	80	77.273	Dipodomys_ordii
ENSPNYG00000009079	-	93	58.933	ENSEBUG00000002129	RBFOX3	96	61.919	Eptatretus_burgeri
ENSPNYG00000009079	-	73	55.797	ENSEBUG00000013559	RBFOX3	74	55.805	Eptatretus_burgeri
ENSPNYG00000009079	-	77	72.425	ENSEASG00005005059	RBFOX3	100	73.734	Equus_asinus_asinus
ENSPNYG00000009079	-	78	71.803	ENSECAG00000023811	RBFOX3	100	73.418	Equus_caballus
ENSPNYG00000009079	-	63	85.294	ENSEEUG00000013974	RBFOX3	65	85.294	Erinaceus_europaeus
ENSPNYG00000009079	-	97	76.486	ENSELUG00000017963	rbfox3b	98	76.667	Esox_lucius
ENSPNYG00000009079	-	52	62.105	ENSELUG00000009807	-	50	62.105	Esox_lucius
ENSPNYG00000009079	-	94	73.056	ENSFCAG00000002555	RBFOX3	100	73.889	Felis_catus
ENSPNYG00000009079	-	88	57.181	ENSFALG00000012288	RBFOX3	93	58.377	Ficedula_albicollis
ENSPNYG00000009079	-	74	93.333	ENSFDAG00000007489	RBFOX3	76	93.333	Fukomys_damarensis
ENSPNYG00000009079	-	81	67.834	ENSFHEG00000008550	rbfox3b	100	67.949	Fundulus_heteroclitus
ENSPNYG00000009079	-	82	88.636	ENSGMOG00000019304	-	74	74.468	Gadus_morhua
ENSPNYG00000009079	-	96	74.521	ENSGALG00000032889	RBFOX3	100	75.698	Gallus_gallus
ENSPNYG00000009079	-	97	78.090	ENSGAFG00000005025	rbfox3b	100	77.966	Gambusia_affinis
ENSPNYG00000009079	-	72	93.939	ENSGACG00000002138	-	73	93.939	Gasterosteus_aculeatus
ENSPNYG00000009079	-	94	75.556	ENSGAGG00000020025	RBFOX3	100	75.000	Gopherus_agassizii
ENSPNYG00000009079	-	71	93.333	ENSGGOG00000012546	RBFOX3	100	74.204	Gorilla_gorilla
ENSPNYG00000009079	-	97	76.694	ENSHBUG00000018099	rbfox3b	98	76.602	Haplochromis_burtoni
ENSPNYG00000009079	-	85	92.705	ENSHBUG00000023098	-	95	92.705	Haplochromis_burtoni
ENSPNYG00000009079	-	74	93.333	ENSHGLG00000008679	RBFOX3	77	93.333	Heterocephalus_glaber_female
ENSPNYG00000009079	-	74	86.667	ENSHGLG00100014739	RBFOX3	75	86.667	Heterocephalus_glaber_male
ENSPNYG00000009079	-	95	67.120	ENSHCOG00000007444	RBFOX3	94	68.579	Hippocampus_comes
ENSPNYG00000009079	-	84	83.498	ENSHCOG00000001863	RBFOX3	94	83.498	Hippocampus_comes
ENSPNYG00000009079	-	73	75.191	ENSIPUG00000021966	rbfox3b	94	76.190	Ictalurus_punctatus
ENSPNYG00000009079	-	96	74.394	ENSIPUG00000012010	rbfox3a	100	76.819	Ictalurus_punctatus
ENSPNYG00000009079	-	78	62.585	ENSSTOG00000026817	RBFOX3	100	64.333	Ictidomys_tridecemlineatus
ENSPNYG00000009079	-	73	93.103	ENSJJAG00000014167	Rbfox3	78	93.333	Jaculus_jaculus
ENSPNYG00000009079	-	96	76.839	ENSKMAG00000006726	rbfox3b	100	76.986	Kryptolebias_marmoratus
ENSPNYG00000009079	-	96	86.376	ENSLBEG00000022508	-	100	86.376	Labrus_bergylta
ENSPNYG00000009079	-	97	77.297	ENSLBEG00000004030	rbfox3b	100	80.731	Labrus_bergylta
ENSPNYG00000009079	-	50	59.239	ENSLACG00000000021	-	95	59.239	Latimeria_chalumnae
ENSPNYG00000009079	-	86	66.851	ENSLACG00000018409	-	92	68.232	Latimeria_chalumnae
ENSPNYG00000009079	-	84	79.141	ENSLOCG00000012267	rbfox3a	98	81.902	Lepisosteus_oculatus
ENSPNYG00000009079	-	75	87.879	ENSLAFG00000016623	RBFOX3	76	88.235	Loxodonta_africana
ENSPNYG00000009079	-	73	93.103	ENSMFAG00000002247	RBFOX3	78	93.333	Macaca_fascicularis
ENSPNYG00000009079	-	73	93.103	ENSMMUG00000023028	RBFOX3	100	74.204	Macaca_mulatta
ENSPNYG00000009079	-	77	72.575	ENSMNEG00000041147	RBFOX3	100	73.885	Macaca_nemestrina
ENSPNYG00000009079	-	77	73.579	ENSMLEG00000025686	RBFOX3	100	74.204	Mandrillus_leucophaeus
ENSPNYG00000009079	-	82	77.483	ENSMAMG00000019810	rbfox3b	100	77.333	Mastacembelus_armatus
ENSPNYG00000009079	-	88	82.934	ENSMAMG00000020600	-	96	82.934	Mastacembelus_armatus
ENSPNYG00000009079	-	69	83.571	ENSMZEG00005003055	-	66	97.351	Maylandia_zebra
ENSPNYG00000009079	-	97	76.694	ENSMZEG00005000781	rbfox3b	100	77.473	Maylandia_zebra
ENSPNYG00000009079	-	61	77.273	ENSMGAG00000005600	RBFOX3	83	78.182	Meleagris_gallopavo
ENSPNYG00000009079	-	77	80.488	ENSMAUG00000013543	Rbfox3	78	86.667	Mesocricetus_auratus
ENSPNYG00000009079	-	75	93.333	ENSMICG00000014898	RBFOX3	100	73.802	Microcebus_murinus
ENSPNYG00000009079	-	73	86.207	ENSMOCG00000015373	Rbfox3	78	86.667	Microtus_ochrogaster
ENSPNYG00000009079	-	96	77.222	ENSMMOG00000020193	rbfox3b	97	77.500	Mola_mola
ENSPNYG00000009079	-	94	73.538	ENSMODG00000002089	RBFOX3	100	74.373	Monodelphis_domestica
ENSPNYG00000009079	-	97	84.595	ENSMALG00000018270	-	99	85.852	Monopterus_albus
ENSPNYG00000009079	-	96	76.567	ENSMALG00000020407	rbfox3b	100	76.712	Monopterus_albus
ENSPNYG00000009079	-	73	86.207	MGP_CAROLIEiJ_G0017487	Rbfox3	92	90.299	Mus_caroli
ENSPNYG00000009079	-	74	90.000	ENSMUSG00000025576	Rbfox3	92	90.299	Mus_musculus
ENSPNYG00000009079	-	73	89.655	MGP_PahariEiJ_G0018614	Rbfox3	92	91.045	Mus_pahari
ENSPNYG00000009079	-	73	89.655	MGP_SPRETEiJ_G0018331	Rbfox3	92	90.299	Mus_spretus
ENSPNYG00000009079	-	86	66.848	ENSMPUG00000012319	RBFOX3	96	66.757	Mustela_putorius_furo
ENSPNYG00000009079	-	73	89.655	ENSNGAG00000018006	Rbfox3	78	90.000	Nannospalax_galili
ENSPNYG00000009079	-	97	77.429	ENSNBRG00000010102	rbfox3b	100	77.077	Neolamprologus_brichardi
ENSPNYG00000009079	-	85	97.078	ENSNBRG00000022885	-	90	97.078	Neolamprologus_brichardi
ENSPNYG00000009079	-	81	58.446	ENSNLEG00000000153	-	96	57.770	Nomascus_leucogenys
ENSPNYG00000009079	-	74	90.000	ENSMEUG00000004218	-	78	90.000	Notamacropus_eugenii
ENSPNYG00000009079	-	61	82.759	ENSOPRG00000016279	-	63	80.645	Ochotona_princeps
ENSPNYG00000009079	-	78	84.444	ENSODEG00000009433	RBFOX3	100	74.921	Octodon_degus
ENSPNYG00000009079	-	86	90.149	ENSONIG00000007282	-	98	90.149	Oreochromis_niloticus
ENSPNYG00000009079	-	93	76.519	ENSONIG00000009549	rbfox3b	98	76.667	Oreochromis_niloticus
ENSPNYG00000009079	-	96	76.902	ENSORLG00000000905	rbfox3b	79	76.230	Oryzias_latipes
ENSPNYG00000009079	-	96	76.902	ENSORLG00020018030	rbfox3b	99	76.230	Oryzias_latipes_hni
ENSPNYG00000009079	-	96	76.630	ENSORLG00015009200	rbfox3b	99	76.503	Oryzias_latipes_hsok
ENSPNYG00000009079	-	81	77.419	ENSOMEG00000014677	rbfox3b	85	77.640	Oryzias_melastigma
ENSPNYG00000009079	-	88	70.381	ENSOGAG00000029595	RBFOX3	91	71.261	Otolemur_garnettii
ENSPNYG00000009079	-	62	61.638	ENSOARG00000002908	RBFOX3	93	52.893	Ovis_aries
ENSPNYG00000009079	-	65	79.832	ENSPPAG00000025383	RBFOX3	88	79.447	Pan_paniscus
ENSPNYG00000009079	-	73	86.207	ENSPPRG00000007819	RBFOX3	80	86.667	Panthera_pardus
ENSPNYG00000009079	-	71	93.333	ENSPTRG00000009727	RBFOX3	100	74.204	Pan_troglodytes
ENSPNYG00000009079	-	77	73.579	ENSPANG00000019837	RBFOX3	100	74.204	Papio_anubis
ENSPNYG00000009079	-	96	79.088	ENSPKIG00000010299	rbfox3a	89	83.495	Paramormyrops_kingsleyae
ENSPNYG00000009079	-	95	59.341	ENSPKIG00000022633	-	97	61.050	Paramormyrops_kingsleyae
ENSPNYG00000009079	-	88	76.012	ENSPMGG00000008000	rbfox3b	96	78.571	Periophthalmus_magnuspinnatus
ENSPNYG00000009079	-	73	86.207	ENSPEMG00000010500	Rbfox3	78	86.667	Peromyscus_maniculatus_bairdii
ENSPNYG00000009079	-	90	90.000	ENSPCIG00000005766	RBFOX3	81	90.000	Phascolarctos_cinereus
ENSPNYG00000009079	-	94	76.164	ENSPFOG00000018294	rbfox3b	95	76.309	Poecilia_formosa
ENSPNYG00000009079	-	66	82.377	ENSPLAG00000000481	rbfox3b	79	82.231	Poecilia_latipinna
ENSPNYG00000009079	-	81	67.516	ENSPMEG00000022997	rbfox3b	100	67.628	Poecilia_mexicana
ENSPNYG00000009079	-	97	77.089	ENSPREG00000012886	rbfox3b	100	76.965	Poecilia_reticulata
ENSPNYG00000009079	-	73	72.453	ENSPPYG00000008704	RBFOX3	77	72.624	Pongo_abelii
ENSPNYG00000009079	-	73	86.207	ENSPCAG00000001401	RBFOX3	78	86.667	Procavia_capensis
ENSPNYG00000009079	-	78	93.103	ENSPCOG00000012689	RBFOX3	78	93.333	Propithecus_coquereli
ENSPNYG00000009079	-	73	86.207	ENSPVAG00000015243	RBFOX3	78	86.667	Pteropus_vampyrus
ENSPNYG00000009079	-	82	67.774	ENSPNAG00000018173	rbfox3b	91	66.890	Pygocentrus_nattereri
ENSPNYG00000009079	-	97	77.067	ENSPNAG00000002889	rbfox3a	100	79.032	Pygocentrus_nattereri
ENSPNYG00000009079	-	75	84.848	ENSRNOG00000003386	Rbfox3	100	73.418	Rattus_norvegicus
ENSPNYG00000009079	-	94	73.611	ENSRBIG00000040449	RBFOX3	100	74.444	Rhinopithecus_bieti
ENSPNYG00000009079	-	77	72.910	ENSRROG00000000766	RBFOX3	100	74.204	Rhinopithecus_roxellana
ENSPNYG00000009079	-	73	93.103	ENSSBOG00000031591	RBFOX3	100	73.567	Saimiri_boliviensis_boliviensis
ENSPNYG00000009079	-	87	65.847	ENSSHAG00000016076	RBFOX3	100	64.217	Sarcophilus_harrisii
ENSPNYG00000009079	-	94	64.365	ENSSFOG00015004716	RBFOX3	100	65.922	Scleropages_formosus
ENSPNYG00000009079	-	96	77.480	ENSSFOG00015023260	rbfox3a	99	79.839	Scleropages_formosus
ENSPNYG00000009079	-	96	82.787	ENSSMAG00000019052	-	100	82.787	Scophthalmus_maximus
ENSPNYG00000009079	-	94	72.513	ENSSMAG00000012618	rbfox3b	85	72.679	Scophthalmus_maximus
ENSPNYG00000009079	-	98	87.571	ENSSDUG00000015801	-	100	87.288	Seriola_dumerili
ENSPNYG00000009079	-	81	67.834	ENSSDUG00000023183	rbfox3b	100	67.949	Seriola_dumerili
ENSPNYG00000009079	-	96	77.384	ENSSLDG00000000149	rbfox3b	100	77.534	Seriola_lalandi_dorsalis
ENSPNYG00000009079	-	98	88.889	ENSSLDG00000016098	-	100	88.889	Seriola_lalandi_dorsalis
ENSPNYG00000009079	-	94	66.760	ENSSPUG00000011733	RBFOX3	99	75.159	Sphenodon_punctatus
ENSPNYG00000009079	-	97	76.124	ENSSPAG00000017571	rbfox3b	100	76.271	Stegastes_partitus
ENSPNYG00000009079	-	70	76.753	ENSSPAG00000004898	-	71	82.573	Stegastes_partitus
ENSPNYG00000009079	-	67	87.879	ENSSSCG00000039498	RBFOX3	73	88.235	Sus_scrofa
ENSPNYG00000009079	-	86	73.373	ENSTRUG00000004894	rbfox3b	94	72.189	Takifugu_rubripes
ENSPNYG00000009079	-	88	66.577	ENSTNIG00000011278	rbfox3b	92	66.667	Tetraodon_nigroviridis
ENSPNYG00000009079	-	65	54.237	ENSTBEG00000004296	-	68	55.777	Tupaia_belangeri
ENSPNYG00000009079	-	73	93.103	ENSTTRG00000003676	RBFOX3	78	93.333	Tursiops_truncatus
ENSPNYG00000009079	-	77	72.241	ENSUAMG00000004668	RBFOX3	100	73.567	Ursus_americanus
ENSPNYG00000009079	-	90	93.103	ENSVVUG00000017864	RBFOX3	81	93.333	Vulpes_vulpes
ENSPNYG00000009079	-	87	58.263	ENSXETG00000020236	rbfox3	90	59.384	Xenopus_tropicalis
ENSPNYG00000009079	-	93	75.967	ENSXCOG00000018262	rbfox3b	100	80.135	Xiphophorus_couchianus
ENSPNYG00000009079	-	97	77.297	ENSXMAG00000012939	rbfox3b	98	76.667	Xiphophorus_maculatus