EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPNYG00000009484 (Gene tree)
Gene ID: 102195020
Gene Symbol: setd1ba
Alias: im:7156157|si:dkey-237o15.4
Full Name: SET domain containing 1B
Gene Type: protein_coding
Species: Pundamilia_nyererei
Status: putative
Strand: Minus strand
Length: 11181 bases
Position: chrJH419268.1:1167117-1178297
Accession: 102195020
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPNYP00000012609	RRM_1	PF00076.22	6.3e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPNYT00000012916	-	5403	XM_005735235	ENSPNYP00000012609	1800 (aa)	XP_005735292	-

Gene Model

Click here to download ENSPNYG00000009484's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPNYG00000009484's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPNYG00000009484	setd1ba	54	66.557	ENSPNYG00000014139	setd1a	59	65.605

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPNYG00000009484	setd1ba	99	83.424	ENSAPOG00000014731	setd1ba	100	84.193	Acanthochromis_polyacanthus
ENSPNYG00000009484	setd1ba	99	82.489	ENSACIG00000016453	setd1ba	100	82.985	Amphilophus_citrinellus
ENSPNYG00000009484	setd1ba	96	83.034	ENSAOCG00000012148	setd1ba	99	83.632	Amphiprion_ocellaris
ENSPNYG00000009484	setd1ba	100	83.424	ENSAPEG00000010762	setd1ba	100	82.665	Amphiprion_percula
ENSPNYG00000009484	setd1ba	90	84.404	ENSATEG00000021563	setd1ba	98	84.232	Anabas_testudineus
ENSPNYG00000009484	setd1ba	90	58.424	ENSAPLG00000005217	SETD1B	87	58.027	Anas_platyrhynchos
ENSPNYG00000009484	setd1ba	99	96.409	ENSACLG00000016584	setd1ba	100	96.409	Astatotilapia_calliptera
ENSPNYG00000009484	setd1ba	51	71.642	ENSCHIG00000013406	SETD1B	87	53.205	Capra_hircus
ENSPNYG00000009484	setd1ba	67	62.313	ENSTSYG00000033777	SETD1B	77	56.134	Carlito_syrichta
ENSPNYG00000009484	setd1ba	59	68.647	ENSCGRG00000016965	-	63	68.506	Cricetulus_griseus_crigri
ENSPNYG00000009484	setd1ba	55	81.379	ENSCSEG00000001458	setd1ba	100	76.172	Cynoglossus_semilaevis
ENSPNYG00000009484	setd1ba	56	80.039	ENSCVAG00000022068	setd1ba	57	79.397	Cyprinodon_variegatus
ENSPNYG00000009484	setd1ba	56	66.080	ENSDARG00000060847	setd1ba	99	61.758	Danio_rerio
ENSPNYG00000009484	setd1ba	53	73.579	ENSELUG00000022712	-	58	73.579	Esox_lucius
ENSPNYG00000009484	setd1ba	99	66.437	ENSELUG00000020846	setd1ba	54	72.163	Esox_lucius
ENSPNYG00000009484	setd1ba	52	82.407	ENSFALG00000009136	SETD1B	87	58.687	Ficedula_albicollis
ENSPNYG00000009484	setd1ba	55	82.399	ENSFHEG00000013126	setd1ba	56	81.431	Fundulus_heteroclitus
ENSPNYG00000009484	setd1ba	52	88.924	ENSGMOG00000009831	setd1ba	59	88.924	Gadus_morhua
ENSPNYG00000009484	setd1ba	89	83.059	ENSGAFG00000008712	setd1ba	90	83.059	Gambusia_affinis
ENSPNYG00000009484	setd1ba	99	96.405	ENSHBUG00000019992	setd1ba	100	96.405	Haplochromis_burtoni
ENSPNYG00000009484	setd1ba	99	75.135	ENSHCOG00000001951	setd1ba	99	74.716	Hippocampus_comes
ENSPNYG00000009484	setd1ba	100	74.812	ENSKMAG00000007804	setd1ba	99	75.107	Kryptolebias_marmoratus
ENSPNYG00000009484	setd1ba	99	75.748	ENSLBEG00000020113	setd1ba	100	73.974	Labrus_bergylta
ENSPNYG00000009484	setd1ba	92	56.383	ENSLACG00000018379	SETD1B	90	55.885	Latimeria_chalumnae
ENSPNYG00000009484	setd1ba	70	79.375	ENSLAFG00000026518	SETD1B	73	78.528	Loxodonta_africana
ENSPNYG00000009484	setd1ba	99	81.216	ENSMAMG00000011027	setd1ba	55	86.542	Mastacembelus_armatus
ENSPNYG00000009484	setd1ba	99	96.409	ENSMZEG00005026617	setd1ba	100	96.409	Maylandia_zebra
ENSPNYG00000009484	setd1ba	67	56.683	ENSMGAG00000004421	SETD1B	87	57.172	Meleagris_gallopavo
ENSPNYG00000009484	setd1ba	99	78.403	ENSMMOG00000008190	setd1ba	99	79.086	Mola_mola
ENSPNYG00000009484	setd1ba	99	80.489	ENSMALG00000005362	setd1ba	56	86.834	Monopterus_albus
ENSPNYG00000009484	setd1ba	100	99.057	ENSNBRG00000002915	setd1ba	100	99.057	Neolamprologus_brichardi
ENSPNYG00000009484	setd1ba	50	83.172	ENSODEG00000010155	SETD1B	80	56.960	Octodon_degus
ENSPNYG00000009484	setd1ba	99	95.209	ENSONIG00000013898	setd1ba	100	95.209	Oreochromis_niloticus
ENSPNYG00000009484	setd1ba	99	75.972	ENSORLG00000008435	setd1ba	56	80.452	Oryzias_latipes
ENSPNYG00000009484	setd1ba	99	76.793	ENSORLG00020017079	setd1ba	100	76.519	Oryzias_latipes_hni
ENSPNYG00000009484	setd1ba	64	74.129	ENSORLG00015004156	setd1ba	98	73.632	Oryzias_latipes_hsok
ENSPNYG00000009484	setd1ba	83	63.967	ENSPKIG00000023115	setd1ba	90	60.447	Paramormyrops_kingsleyae
ENSPNYG00000009484	setd1ba	87	77.564	ENSPMGG00000011527	setd1ba	91	77.564	Periophthalmus_magnuspinnatus
ENSPNYG00000009484	setd1ba	50	80.380	ENSPCIG00000028605	SETD1B	87	57.994	Phascolarctos_cinereus
ENSPNYG00000009484	setd1ba	56	83.071	ENSPFOG00000019768	setd1ba	100	76.994	Poecilia_formosa
ENSPNYG00000009484	setd1ba	54	82.892	ENSPLAG00000023459	setd1ba	100	77.476	Poecilia_latipinna
ENSPNYG00000009484	setd1ba	56	83.169	ENSPMEG00000020446	setd1ba	100	76.994	Poecilia_mexicana
ENSPNYG00000009484	setd1ba	56	82.579	ENSPREG00000011589	setd1ba	100	78.043	Poecilia_reticulata
ENSPNYG00000009484	setd1ba	55	66.603	ENSPNAG00000016011	setd1ba	57	66.795	Pygocentrus_nattereri
ENSPNYG00000009484	setd1ba	58	62.544	ENSRNOG00000001337	Setd1b	73	61.565	Rattus_norvegicus
ENSPNYG00000009484	setd1ba	99	76.649	ENSSMAG00000001244	setd1ba	99	76.136	Scophthalmus_maximus
ENSPNYG00000009484	setd1ba	55	89.261	ENSSDUG00000018313	setd1ba	100	82.745	Seriola_dumerili
ENSPNYG00000009484	setd1ba	55	89.064	ENSSLDG00000015543	setd1ba	99	83.296	Seriola_lalandi_dorsalis
ENSPNYG00000009484	setd1ba	53	68.881	ENSSPUG00000011847	SETD1B	88	57.467	Sphenodon_punctatus
ENSPNYG00000009484	setd1ba	99	83.797	ENSSPAG00000015470	setd1ba	100	84.561	Stegastes_partitus
ENSPNYG00000009484	setd1ba	70	80.851	ENSSSCG00000009806	SETD1B	90	59.622	Sus_scrofa
ENSPNYG00000009484	setd1ba	97	75.668	ENSTRUG00000009533	setd1ba	100	75.820	Takifugu_rubripes
ENSPNYG00000009484	setd1ba	99	77.802	ENSTNIG00000009090	setd1ba	56	84.405	Tetraodon_nigroviridis
ENSPNYG00000009484	setd1ba	52	60.274	ENSUAMG00000008729	SETD1B	80	58.080	Ursus_americanus
ENSPNYG00000009484	setd1ba	69	55.958	ENSXETG00000003760	setd1b	85	58.254	Xenopus_tropicalis
ENSPNYG00000009484	setd1ba	56	80.897	ENSXCOG00000004451	setd1ba	99	76.740	Xiphophorus_couchianus
ENSPNYG00000009484	setd1ba	55	83.633	ENSXMAG00000014097	setd1ba	100	76.551	Xiphophorus_maculatus