EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPNYG00000009490 (Gene tree)
Gene ID: 102206392
Gene Symbol: si:dkey-16l2.16
Alias: -
Full Name: ras-related protein Rab-35-like
Gene Type: protein_coding
Species: Pundamilia_nyererei
Status: putative
Strand: Plus strand
Length: 10148 bases
Position: chrJH419300.1:119787-129934
Accession: 102206392
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPNYP00000012502	MMR_HSR1	PF01926.23	3.9e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPNYT00000012808	-	3070	XM_005739895	ENSPNYP00000012502	209 (aa)	XP_005739952	UPI0003AFC909
ENSPNYT00000012817	-	579	-	ENSPNYP00000012511	192 (aa)	-	-

Gene Model

Click here to download ENSPNYG00000009490's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPNYG00000009490's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPNYG00000009490	si:dkey-16l2.16	77	46.951	ENSPNYG00000015774	RAB39B	75	48.125
ENSPNYG00000009490	si:dkey-16l2.16	98	38.942	ENSPNYG00000018244	rab11al	74	47.170
ENSPNYG00000009490	si:dkey-16l2.16	90	43.158	ENSPNYG00000008498	-	74	45.509
ENSPNYG00000009490	si:dkey-16l2.16	97	32.850	ENSPNYG00000018613	si:dkey-13a21.4	81	36.905
ENSPNYG00000009490	si:dkey-16l2.16	88	42.929	ENSPNYG00000012922	zgc:101559	79	43.478
ENSPNYG00000009490	si:dkey-16l2.16	67	34.043	ENSPNYG00000019639	rab23	78	33.125
ENSPNYG00000009490	si:dkey-16l2.16	52	47.706	ENSPNYG00000023810	-	53	47.706
ENSPNYG00000009490	si:dkey-16l2.16	76	63.125	ENSPNYG00000015841	-	79	63.125
ENSPNYG00000009490	si:dkey-16l2.16	99	42.308	ENSPNYG00000018214	rab25b	77	46.584
ENSPNYG00000009490	si:dkey-16l2.16	73	40.373	ENSPNYG00000015355	RAB29	77	40.373
ENSPNYG00000009490	si:dkey-16l2.16	74	33.540	ENSPNYG00000023681	dnajc27	59	33.540
ENSPNYG00000009490	si:dkey-16l2.16	95	35.071	ENSPNYG00000017514	rab34a	65	38.462
ENSPNYG00000009490	si:dkey-16l2.16	69	48.026	ENSPNYG00000003511	-	79	42.632
ENSPNYG00000009490	si:dkey-16l2.16	98	52.381	ENSPNYG00000007520	-	77	62.577
ENSPNYG00000009490	si:dkey-16l2.16	78	42.073	ENSPNYG00000007314	-	76	41.718
ENSPNYG00000009490	si:dkey-16l2.16	98	38.571	ENSPNYG00000012426	rab2a	75	46.541
ENSPNYG00000009490	si:dkey-16l2.16	77	40.244	ENSPNYG00000020556	rab6a	74	40.260
ENSPNYG00000009490	si:dkey-16l2.16	83	33.690	ENSPNYG00000008014	rab32b	73	36.250
ENSPNYG00000009490	si:dkey-16l2.16	73	48.387	ENSPNYG00000007064	rab18a	75	48.387
ENSPNYG00000009490	si:dkey-16l2.16	81	49.412	ENSPNYG00000004681	-	85	49.412
ENSPNYG00000009490	si:dkey-16l2.16	77	39.634	ENSPNYG00000019963	rab6ba	86	39.634
ENSPNYG00000009490	si:dkey-16l2.16	98	41.148	ENSPNYG00000019611	-	80	44.828
ENSPNYG00000009490	si:dkey-16l2.16	89	39.683	ENSPNYG00000005654	rab12	69	41.916
ENSPNYG00000009490	si:dkey-16l2.16	84	45.810	ENSPNYG00000001751	rab18b	84	46.821
ENSPNYG00000009490	si:dkey-16l2.16	76	36.646	ENSPNYG00000015124	hrasb	83	36.646
ENSPNYG00000009490	si:dkey-16l2.16	92	45.876	ENSPNYG00000000512	rab15	82	48.851
ENSPNYG00000009490	si:dkey-16l2.16	83	30.460	ENSPNYG00000004845	rabl2	76	30.460
ENSPNYG00000009490	si:dkey-16l2.16	98	40.670	ENSPNYG00000004098	rab11bb	80	44.828
ENSPNYG00000009490	si:dkey-16l2.16	76	32.099	ENSPNYG00000016378	-	77	32.099
ENSPNYG00000009490	si:dkey-16l2.16	75	45.570	ENSPNYG00000010612	rab5aa	72	46.154
ENSPNYG00000009490	si:dkey-16l2.16	96	37.313	ENSPNYG00000010615	rab5c	72	43.038
ENSPNYG00000009490	si:dkey-16l2.16	73	34.615	ENSPNYG00000005416	si:ch73-116o1.2	82	33.140
ENSPNYG00000009490	si:dkey-16l2.16	96	33.173	ENSPNYG00000015328	RAB9A	73	39.375
ENSPNYG00000009490	si:dkey-16l2.16	100	40.930	ENSPNYG00000019644	rab11ba	83	44.444
ENSPNYG00000009490	si:dkey-16l2.16	55	31.356	ENSPNYG00000001516	arl4d	58	31.356
ENSPNYG00000009490	si:dkey-16l2.16	79	40.719	ENSPNYG00000015851	-	75	40.719
ENSPNYG00000009490	si:dkey-16l2.16	78	62.577	ENSPNYG00000009172	rab1ab	80	62.963
ENSPNYG00000009490	si:dkey-16l2.16	78	36.095	ENSPNYG00000006192	rheb	88	36.095
ENSPNYG00000009490	si:dkey-16l2.16	80	38.728	ENSPNYG00000005809	-	83	38.728
ENSPNYG00000009490	si:dkey-16l2.16	73	41.558	ENSPNYG00000013288	rab41	73	41.558
ENSPNYG00000009490	si:dkey-16l2.16	100	34.419	ENSPNYG00000000233	rab9b	80	37.017
ENSPNYG00000009490	si:dkey-16l2.16	78	42.424	ENSPNYG00000023905	rab12	69	41.916
ENSPNYG00000009490	si:dkey-16l2.16	76	36.646	ENSPNYG00000013814	KRAS	88	33.929
ENSPNYG00000009490	si:dkey-16l2.16	79	30.939	ENSPNYG00000017665	rasl11a	69	30.939
ENSPNYG00000009490	si:dkey-16l2.16	77	46.341	ENSPNYG00000019276	-	75	47.500
ENSPNYG00000009490	si:dkey-16l2.16	74	35.256	ENSPNYG00000011135	RAB17	68	35.256
ENSPNYG00000009490	si:dkey-16l2.16	53	35.714	ENSPNYG00000007565	RAP2B	93	35.484
ENSPNYG00000009490	si:dkey-16l2.16	99	69.565	ENSPNYG00000007156	rab35b	86	79.191
ENSPNYG00000009490	si:dkey-16l2.16	95	33.333	ENSPNYG00000017153	rab34b	82	37.838
ENSPNYG00000009490	si:dkey-16l2.16	82	46.243	ENSPNYG00000022091	RAB15	82	46.243
ENSPNYG00000009490	si:dkey-16l2.16	87	47.253	ENSPNYG00000009728	rab30	81	47.191
ENSPNYG00000009490	si:dkey-16l2.16	98	42.308	ENSPNYG00000002252	rab11a	96	41.262
ENSPNYG00000009490	si:dkey-16l2.16	87	45.503	ENSPNYG00000000044	rab33a	72	45.930
ENSPNYG00000009490	si:dkey-16l2.16	75	46.835	ENSPNYG00000010491	rab25a	75	46.835
ENSPNYG00000009490	si:dkey-16l2.16	80	38.728	ENSPNYG00000020409	RAB7A	83	38.728
ENSPNYG00000009490	si:dkey-16l2.16	55	32.203	ENSPNYG00000013877	arl4aa	59	32.203
ENSPNYG00000009490	si:dkey-16l2.16	99	52.174	ENSPNYG00000010377	rab1ba	81	61.728
ENSPNYG00000009490	si:dkey-16l2.16	91	40.196	ENSPNYG00000013054	rab33ba	62	48.649
ENSPNYG00000009490	si:dkey-16l2.16	77	39.634	ENSPNYG00000010861	rab6bb	77	39.216
ENSPNYG00000009490	si:dkey-16l2.16	78	42.945	ENSPNYG00000005326	-	76	42.945
ENSPNYG00000009490	si:dkey-16l2.16	55	30.172	ENSPNYG00000012720	arl5c	68	30.172
ENSPNYG00000009490	si:dkey-16l2.16	83	31.250	ENSPNYG00000001744	rhebl1	89	33.533
ENSPNYG00000009490	si:dkey-16l2.16	77	43.902	ENSPNYG00000010325	rab42a	62	43.902
ENSPNYG00000009490	si:dkey-16l2.16	55	30.172	ENSPNYG00000003962	arl3	61	30.172

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPNYG00000009490	si:dkey-16l2.16	100	94.737	ENSAPOG00000008263	si:dkey-16l2.16	100	94.737	Acanthochromis_polyacanthus
ENSPNYG00000009490	si:dkey-16l2.16	100	96.172	ENSAOCG00000016825	si:dkey-16l2.16	100	96.172	Amphiprion_ocellaris
ENSPNYG00000009490	si:dkey-16l2.16	100	96.172	ENSAPEG00000006500	si:dkey-16l2.16	100	96.172	Amphiprion_percula
ENSPNYG00000009490	si:dkey-16l2.16	100	94.737	ENSATEG00000019238	si:dkey-16l2.16	100	94.737	Anabas_testudineus
ENSPNYG00000009490	si:dkey-16l2.16	100	99.522	ENSACLG00000018721	si:dkey-16l2.16	100	99.522	Astatotilapia_calliptera
ENSPNYG00000009490	si:dkey-16l2.16	100	95.215	ENSAMXG00000038243	si:dkey-16l2.16	100	95.215	Astyanax_mexicanus
ENSPNYG00000009490	si:dkey-16l2.16	56	97.458	ENSCSEG00000009988	si:dkey-16l2.16	90	97.458	Cynoglossus_semilaevis
ENSPNYG00000009490	si:dkey-16l2.16	100	94.737	ENSCVAG00000003537	si:dkey-16l2.16	100	94.737	Cyprinodon_variegatus
ENSPNYG00000009490	si:dkey-16l2.16	100	93.301	ENSDARG00000037967	si:dkey-16l2.16	99	98.305	Danio_rerio
ENSPNYG00000009490	si:dkey-16l2.16	99	87.981	ENSELUG00000023247	si:dkey-16l2.16	99	87.019	Esox_lucius
ENSPNYG00000009490	si:dkey-16l2.16	58	94.215	ENSFHEG00000000767	si:dkey-16l2.16	78	94.215	Fundulus_heteroclitus
ENSPNYG00000009490	si:dkey-16l2.16	77	85.714	ENSGMOG00000015174	si:dkey-16l2.16	98	85.714	Gadus_morhua
ENSPNYG00000009490	si:dkey-16l2.16	100	88.517	ENSGAFG00000005388	si:dkey-16l2.16	100	88.517	Gambusia_affinis
ENSPNYG00000009490	si:dkey-16l2.16	100	95.215	ENSGACG00000014915	si:dkey-16l2.16	98	95.215	Gasterosteus_aculeatus
ENSPNYG00000009490	si:dkey-16l2.16	100	100.000	ENSHBUG00000019261	si:dkey-16l2.16	100	100.000	Haplochromis_burtoni
ENSPNYG00000009490	si:dkey-16l2.16	100	93.780	ENSHCOG00000006538	si:dkey-16l2.16	100	93.780	Hippocampus_comes
ENSPNYG00000009490	si:dkey-16l2.16	100	90.909	ENSKMAG00000003494	si:dkey-16l2.16	100	90.909	Kryptolebias_marmoratus
ENSPNYG00000009490	si:dkey-16l2.16	100	95.694	ENSLBEG00000007681	si:dkey-16l2.16	100	95.694	Labrus_bergylta
ENSPNYG00000009490	si:dkey-16l2.16	100	94.258	ENSMAMG00000019230	si:dkey-16l2.16	100	94.258	Mastacembelus_armatus
ENSPNYG00000009490	si:dkey-16l2.16	100	99.522	ENSMZEG00005002081	si:dkey-16l2.16	100	99.522	Maylandia_zebra
ENSPNYG00000009490	si:dkey-16l2.16	99	95.631	ENSMMOG00000020140	si:dkey-16l2.16	97	95.631	Mola_mola
ENSPNYG00000009490	si:dkey-16l2.16	100	93.780	ENSMALG00000014727	si:dkey-16l2.16	99	93.780	Monopterus_albus
ENSPNYG00000009490	si:dkey-16l2.16	100	99.043	ENSNBRG00000008930	si:dkey-16l2.16	100	99.043	Neolamprologus_brichardi
ENSPNYG00000009490	si:dkey-16l2.16	100	99.522	ENSONIG00000009443	si:dkey-16l2.16	100	99.522	Oreochromis_niloticus
ENSPNYG00000009490	si:dkey-16l2.16	100	89.474	ENSORLG00000001098	si:dkey-16l2.16	99	89.474	Oryzias_latipes
ENSPNYG00000009490	si:dkey-16l2.16	100	89.474	ENSORLG00020000867	si:dkey-16l2.16	99	89.474	Oryzias_latipes_hni
ENSPNYG00000009490	si:dkey-16l2.16	100	88.517	ENSOMEG00000015474	si:dkey-16l2.16	100	88.038	Oryzias_melastigma
ENSPNYG00000009490	si:dkey-16l2.16	100	94.258	ENSPKIG00000005686	-	100	94.258	Paramormyrops_kingsleyae
ENSPNYG00000009490	si:dkey-16l2.16	100	79.904	ENSPKIG00000018888	si:dkey-16l2.16	94	82.653	Paramormyrops_kingsleyae
ENSPNYG00000009490	si:dkey-16l2.16	100	93.780	ENSPMGG00000000751	si:dkey-16l2.16	100	93.780	Periophthalmus_magnuspinnatus
ENSPNYG00000009490	si:dkey-16l2.16	100	89.474	ENSPFOG00000004746	si:dkey-16l2.16	100	89.474	Poecilia_formosa
ENSPNYG00000009490	si:dkey-16l2.16	100	88.995	ENSPLAG00000021043	si:dkey-16l2.16	100	88.995	Poecilia_latipinna
ENSPNYG00000009490	si:dkey-16l2.16	100	89.474	ENSPMEG00000007165	si:dkey-16l2.16	100	89.474	Poecilia_mexicana
ENSPNYG00000009490	si:dkey-16l2.16	100	88.995	ENSPREG00000005323	si:dkey-16l2.16	100	88.995	Poecilia_reticulata
ENSPNYG00000009490	si:dkey-16l2.16	100	95.694	ENSPNAG00000018986	si:dkey-16l2.16	100	95.694	Pygocentrus_nattereri
ENSPNYG00000009490	si:dkey-16l2.16	100	93.301	ENSSFOG00015021448	-	100	93.301	Scleropages_formosus
ENSPNYG00000009490	si:dkey-16l2.16	99	82.212	ENSSFOG00015006414	-	85	85.311	Scleropages_formosus
ENSPNYG00000009490	si:dkey-16l2.16	100	90.431	ENSSMAG00000011769	si:dkey-16l2.16	94	90.431	Scophthalmus_maximus
ENSPNYG00000009490	si:dkey-16l2.16	100	96.172	ENSSDUG00000005719	si:dkey-16l2.16	100	96.172	Seriola_dumerili
ENSPNYG00000009490	si:dkey-16l2.16	100	96.172	ENSSLDG00000003631	si:dkey-16l2.16	100	96.172	Seriola_lalandi_dorsalis
ENSPNYG00000009490	si:dkey-16l2.16	100	96.172	ENSSPAG00000006302	si:dkey-16l2.16	100	96.172	Stegastes_partitus
ENSPNYG00000009490	si:dkey-16l2.16	100	94.258	ENSTRUG00000025076	si:dkey-16l2.16	100	94.258	Takifugu_rubripes
ENSPNYG00000009490	si:dkey-16l2.16	100	94.258	ENSTNIG00000011300	si:dkey-16l2.16	100	94.258	Tetraodon_nigroviridis
ENSPNYG00000009490	si:dkey-16l2.16	100	88.995	ENSXMAG00000021767	si:dkey-16l2.16	100	88.995	Xiphophorus_maculatus