EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPNYG00000009518 (Gene tree)
Gene ID: 102214479
Gene Symbol: pum1
Alias: fb96a03|si:ch211-285e16.1|wu:fb96a03|wu:fb96a08|zgc:63671
Full Name: pumilio RNA binding family member 1
Gene Type: protein_coding
Species: Pundamilia_nyererei
Status: putative
Strand: Minus strand
Length: 27349 bases
Position: chrJH419233.1:1097251-1124599
Accession: 102214479
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPNYP00000012572	PUF	PF00806.19	2.8e-69	1	8
ENSPNYP00000012572	PUF	PF00806.19	2.8e-69	2	8
ENSPNYP00000012572	PUF	PF00806.19	2.8e-69	3	8
ENSPNYP00000012572	PUF	PF00806.19	2.8e-69	4	8
ENSPNYP00000012572	PUF	PF00806.19	2.8e-69	5	8
ENSPNYP00000012572	PUF	PF00806.19	2.8e-69	6	8
ENSPNYP00000012572	PUF	PF00806.19	2.8e-69	7	8
ENSPNYP00000012572	PUF	PF00806.19	2.8e-69	8	8
ENSPNYP00000012588	PUF	PF00806.19	7.8e-62	1	7
ENSPNYP00000012588	PUF	PF00806.19	7.8e-62	2	7
ENSPNYP00000012588	PUF	PF00806.19	7.8e-62	3	7
ENSPNYP00000012588	PUF	PF00806.19	7.8e-62	4	7
ENSPNYP00000012588	PUF	PF00806.19	7.8e-62	5	7
ENSPNYP00000012588	PUF	PF00806.19	7.8e-62	6	7
ENSPNYP00000012588	PUF	PF00806.19	7.8e-62	7	7

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPNYT00000012894	-	2880	-	ENSPNYP00000012588	959 (aa)	-	-
ENSPNYT00000012878	-	5295	XM_005728317	ENSPNYP00000012572	1163 (aa)	XP_005728374	UPI0003AF93AF

Gene Model

Click here to download ENSPNYG00000009518's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPNYG00000009518's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPNYG00000009518	pum1	99	75.545	ENSPNYG00000022901	pum2	73	75.481

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPNYG00000009518	pum1	100	81.840	ENSG00000134644	PUM1	100	81.064	Homo_sapiens
ENSPNYG00000009518	pum1	100	99.226	ENSAPOG00000021632	pum1	100	99.226	Acanthochromis_polyacanthus
ENSPNYG00000009518	pum1	100	81.446	ENSAMEG00000017656	PUM1	97	74.380	Ailuropoda_melanoleuca
ENSPNYG00000009518	pum1	100	98.452	ENSACIG00000021013	pum1	100	98.452	Amphilophus_citrinellus
ENSPNYG00000009518	pum1	100	99.226	ENSAOCG00000003944	pum1	100	99.226	Amphiprion_ocellaris
ENSPNYG00000009518	pum1	100	99.226	ENSAPEG00000014550	pum1	100	99.226	Amphiprion_percula
ENSPNYG00000009518	pum1	100	98.624	ENSATEG00000016004	pum1	100	98.624	Anabas_testudineus
ENSPNYG00000009518	pum1	100	82.169	ENSAPLG00000009351	PUM1	100	74.773	Anas_platyrhynchos
ENSPNYG00000009518	pum1	100	76.490	ENSACAG00000000682	PUM1	98	76.159	Anolis_carolinensis
ENSPNYG00000009518	pum1	100	81.598	ENSANAG00000027865	PUM1	100	80.941	Aotus_nancymaae
ENSPNYG00000009518	pum1	92	99.812	ENSACLG00000019354	pum1	100	99.812	Astatotilapia_calliptera
ENSPNYG00000009518	pum1	100	82.288	ENSAMXG00000020607	pum1	96	82.203	Astyanax_mexicanus
ENSPNYG00000009518	pum1	100	81.840	ENSBTAG00000018979	PUM1	100	81.211	Bos_taurus
ENSPNYG00000009518	pum1	100	81.446	ENSCJAG00000006035	PUM1	100	81.064	Callithrix_jacchus
ENSPNYG00000009518	pum1	100	81.446	ENSCAFG00020024616	PUM1	98	81.188	Canis_lupus_dingo
ENSPNYG00000009518	pum1	100	81.840	ENSCHIG00000012952	PUM1	100	76.305	Capra_hircus
ENSPNYG00000009518	pum1	100	86.701	ENSTSYG00000008868	PUM1	100	81.928	Carlito_syrichta
ENSPNYG00000009518	pum1	100	81.446	ENSCPOG00000031613	PUM1	100	80.817	Cavia_porcellus
ENSPNYG00000009518	pum1	94	91.084	ENSCATG00000017991	PUM1	93	91.566	Cercocebus_atys
ENSPNYG00000009518	pum1	100	81.446	ENSCLAG00000007662	PUM1	100	80.817	Chinchilla_lanigera
ENSPNYG00000009518	pum1	100	81.446	ENSCSAG00000001028	PUM1	100	73.443	Chlorocebus_sabaeus
ENSPNYG00000009518	pum1	99	68.557	ENSCHOG00000010245	PUM1	93	65.459	Choloepus_hoffmanni
ENSPNYG00000009518	pum1	100	82.169	ENSCPBG00000009288	PUM1	100	81.312	Chrysemys_picta_bellii
ENSPNYG00000009518	pum1	100	81.446	ENSCANG00000042606	PUM1	100	81.064	Colobus_angolensis_palliatus
ENSPNYG00000009518	pum1	100	81.356	ENSCGRG00001024949	Pum1	100	82.695	Cricetulus_griseus_chok1gshd
ENSPNYG00000009518	pum1	100	81.356	ENSCGRG00000014197	Pum1	100	82.695	Cricetulus_griseus_crigri
ENSPNYG00000009518	pum1	92	96.532	ENSCSEG00000015981	pum1	100	96.532	Cynoglossus_semilaevis
ENSPNYG00000009518	pum1	100	98.108	ENSCVAG00000007043	pum1	100	98.108	Cyprinodon_variegatus
ENSPNYG00000009518	pum1	100	84.819	ENSDARG00000099256	pum1	100	81.864	Danio_rerio
ENSPNYG00000009518	pum1	100	80.964	ENSDNOG00000010939	PUM1	100	74.855	Dasypus_novemcinctus
ENSPNYG00000009518	pum1	85	90.361	ENSDORG00000001875	Pum1	100	72.172	Dipodomys_ordii
ENSPNYG00000009518	pum1	98	76.344	ENSETEG00000004355	PUM1	82	76.882	Echinops_telfairi
ENSPNYG00000009518	pum1	100	81.205	ENSEASG00005010813	PUM1	100	74.421	Equus_asinus_asinus
ENSPNYG00000009518	pum1	100	81.205	ENSECAG00000021369	PUM1	100	74.276	Equus_caballus
ENSPNYG00000009518	pum1	76	90.222	ENSEEUG00000003871	PUM1	74	90.667	Erinaceus_europaeus
ENSPNYG00000009518	pum1	100	89.164	ENSELUG00000002409	pum1	100	92.373	Esox_lucius
ENSPNYG00000009518	pum1	100	85.422	ENSFCAG00000010374	PUM1	100	81.188	Felis_catus
ENSPNYG00000009518	pum1	100	82.169	ENSFALG00000001214	PUM1	97	74.629	Ficedula_albicollis
ENSPNYG00000009518	pum1	100	81.311	ENSFDAG00000011319	PUM1	100	80.817	Fukomys_damarensis
ENSPNYG00000009518	pum1	100	90.956	ENSGMOG00000010491	pum1	100	90.956	Gadus_morhua
ENSPNYG00000009518	pum1	100	86.189	ENSGALG00000042598	PUM1	99	90.141	Gallus_gallus
ENSPNYG00000009518	pum1	100	98.108	ENSGAFG00000015617	pum1	100	98.108	Gambusia_affinis
ENSPNYG00000009518	pum1	99	96.983	ENSGACG00000005717	pum1	100	96.983	Gasterosteus_aculeatus
ENSPNYG00000009518	pum1	96	90.342	ENSGAGG00000001290	PUM1	99	90.342	Gopherus_agassizii
ENSPNYG00000009518	pum1	100	81.446	ENSGGOG00000011983	PUM1	100	81.064	Gorilla_gorilla
ENSPNYG00000009518	pum1	100	99.914	ENSHBUG00000018718	pum1	100	99.914	Haplochromis_burtoni
ENSPNYG00000009518	pum1	100	81.068	ENSHGLG00000013819	Pum1	100	80.693	Heterocephalus_glaber_female
ENSPNYG00000009518	pum1	100	81.068	ENSHGLG00100008621	Pum1	100	80.693	Heterocephalus_glaber_male
ENSPNYG00000009518	pum1	92	90.525	ENSHCOG00000005149	pum1	100	89.212	Hippocampus_comes
ENSPNYG00000009518	pum1	100	85.542	ENSIPUG00000020421	pum1	100	81.045	Ictalurus_punctatus
ENSPNYG00000009518	pum1	100	81.446	ENSSTOG00000010757	PUM1	100	81.064	Ictidomys_tridecemlineatus
ENSPNYG00000009518	pum1	100	81.687	ENSJJAG00000000530	Pum1	100	81.188	Jaculus_jaculus
ENSPNYG00000009518	pum1	100	98.194	ENSKMAG00000003481	pum1	100	98.194	Kryptolebias_marmoratus
ENSPNYG00000009518	pum1	100	97.420	ENSLBEG00000002527	pum1	100	97.420	Labrus_bergylta
ENSPNYG00000009518	pum1	100	75.431	ENSLACG00000017188	PUM1	99	73.262	Latimeria_chalumnae
ENSPNYG00000009518	pum1	100	84.337	ENSLOCG00000005210	pum1	99	80.917	Lepisosteus_oculatus
ENSPNYG00000009518	pum1	100	83.373	ENSLAFG00000003178	PUM1	100	74.669	Loxodonta_africana
ENSPNYG00000009518	pum1	100	81.446	ENSMFAG00000010291	PUM1	100	81.064	Macaca_fascicularis
ENSPNYG00000009518	pum1	100	81.446	ENSMMUG00000013520	PUM1	100	81.064	Macaca_mulatta
ENSPNYG00000009518	pum1	100	81.446	ENSMNEG00000034639	PUM1	100	81.064	Macaca_nemestrina
ENSPNYG00000009518	pum1	100	81.446	ENSMLEG00000038743	PUM1	100	81.064	Mandrillus_leucophaeus
ENSPNYG00000009518	pum1	100	98.366	ENSMAMG00000011606	pum1	100	98.366	Mastacembelus_armatus
ENSPNYG00000009518	pum1	100	99.914	ENSMZEG00005005834	pum1	100	99.914	Maylandia_zebra
ENSPNYG00000009518	pum1	100	82.169	ENSMGAG00000000724	PUM1	100	77.035	Meleagris_gallopavo
ENSPNYG00000009518	pum1	100	81.446	ENSMAUG00000022090	Pum1	100	83.045	Mesocricetus_auratus
ENSPNYG00000009518	pum1	100	81.205	ENSMICG00000007713	-	100	80.817	Microcebus_murinus
ENSPNYG00000009518	pum1	94	87.740	ENSMICG00000012213	-	100	88.193	Microcebus_murinus
ENSPNYG00000009518	pum1	100	81.446	ENSMOCG00000015463	Pum1	100	82.818	Microtus_ochrogaster
ENSPNYG00000009518	pum1	100	87.780	ENSMMOG00000019817	pum1	100	87.475	Mola_mola
ENSPNYG00000009518	pum1	100	81.928	ENSMODG00000017067	PUM1	100	74.523	Monodelphis_domestica
ENSPNYG00000009518	pum1	100	93.177	ENSMALG00000016399	pum1	100	93.381	Monopterus_albus
ENSPNYG00000009518	pum1	100	82.082	MGP_CAROLIEiJ_G0026549	Pum1	100	80.693	Mus_caroli
ENSPNYG00000009518	pum1	100	81.840	ENSMUSG00000028580	Pum1	100	80.569	Mus_musculus
ENSPNYG00000009518	pum1	100	81.840	MGP_PahariEiJ_G0028881	Pum1	100	80.569	Mus_pahari
ENSPNYG00000009518	pum1	100	81.840	MGP_SPRETEiJ_G0027529	Pum1	100	80.569	Mus_spretus
ENSPNYG00000009518	pum1	100	81.928	ENSMPUG00000015454	PUM1	100	74.421	Mustela_putorius_furo
ENSPNYG00000009518	pum1	100	81.840	ENSMLUG00000006490	PUM1	100	74.194	Myotis_lucifugus
ENSPNYG00000009518	pum1	100	81.446	ENSNGAG00000002378	Pum1	100	81.064	Nannospalax_galili
ENSPNYG00000009518	pum1	79	99.250	ENSNBRG00000010689	pum1	100	99.250	Neolamprologus_brichardi
ENSPNYG00000009518	pum1	94	87.470	ENSNLEG00000001151	PUM1	100	87.952	Nomascus_leucogenys
ENSPNYG00000009518	pum1	73	78.621	ENSMEUG00000000976	-	67	80.418	Notamacropus_eugenii
ENSPNYG00000009518	pum1	81	91.589	ENSOPRG00000001776	PUM1	75	91.589	Ochotona_princeps
ENSPNYG00000009518	pum1	100	76.198	ENSODEG00000003465	PUM1	100	80.817	Octodon_degus
ENSPNYG00000009518	pum1	100	99.398	ENSONIG00000002290	pum1	100	99.398	Oreochromis_niloticus
ENSPNYG00000009518	pum1	92	65.352	ENSOANG00000004902	-	100	61.235	Ornithorhynchus_anatinus
ENSPNYG00000009518	pum1	99	81.752	ENSOCUG00000008641	PUM1	99	74.316	Oryctolagus_cuniculus
ENSPNYG00000009518	pum1	100	97.772	ENSORLG00000011482	pum1	100	97.772	Oryzias_latipes
ENSPNYG00000009518	pum1	100	97.772	ENSORLG00020019461	pum1	100	97.772	Oryzias_latipes_hni
ENSPNYG00000009518	pum1	100	97.772	ENSORLG00015011375	pum1	100	97.772	Oryzias_latipes_hsok
ENSPNYG00000009518	pum1	100	90.660	ENSOMEG00000009312	pum1	100	90.660	Oryzias_melastigma
ENSPNYG00000009518	pum1	100	73.861	ENSOGAG00000011063	PUM1	100	71.867	Otolemur_garnettii
ENSPNYG00000009518	pum1	100	81.446	ENSOARG00000001899	PUM1	100	73.780	Ovis_aries
ENSPNYG00000009518	pum1	100	81.446	ENSPPAG00000044003	PUM1	100	81.064	Pan_paniscus
ENSPNYG00000009518	pum1	100	81.446	ENSPPRG00000001370	PUM1	100	81.188	Panthera_pardus
ENSPNYG00000009518	pum1	100	81.446	ENSPTIG00000010798	PUM1	100	81.436	Panthera_tigris_altaica
ENSPNYG00000009518	pum1	100	81.446	ENSPTRG00000000453	PUM1	100	81.064	Pan_troglodytes
ENSPNYG00000009518	pum1	100	81.446	ENSPANG00000016338	PUM1	100	81.064	Papio_anubis
ENSPNYG00000009518	pum1	95	92.530	ENSPKIG00000010578	pum1	100	77.269	Paramormyrops_kingsleyae
ENSPNYG00000009518	pum1	100	82.169	ENSPSIG00000014118	PUM1	100	74.917	Pelodiscus_sinensis
ENSPNYG00000009518	pum1	79	99.153	ENSPMGG00000005836	pum1	100	99.153	Periophthalmus_magnuspinnatus
ENSPNYG00000009518	pum1	100	81.446	ENSPEMG00000010009	Pum1	100	83.045	Peromyscus_maniculatus_bairdii
ENSPNYG00000009518	pum1	100	81.928	ENSPCIG00000014151	PUM1	100	80.841	Phascolarctos_cinereus
ENSPNYG00000009518	pum1	95	97.394	ENSPFOG00000007289	pum1	99	97.685	Poecilia_formosa
ENSPNYG00000009518	pum1	100	95.067	ENSPLAG00000007256	pum1	100	97.884	Poecilia_latipinna
ENSPNYG00000009518	pum1	100	92.965	ENSPMEG00000019543	pum1	99	97.386	Poecilia_mexicana
ENSPNYG00000009518	pum1	100	98.022	ENSPREG00000005195	pum1	100	98.305	Poecilia_reticulata
ENSPNYG00000009518	pum1	100	81.446	ENSPPYG00000001621	PUM1	100	73.052	Pongo_abelii
ENSPNYG00000009518	pum1	76	93.210	ENSPCAG00000001979	PUM1	73	93.210	Procavia_capensis
ENSPNYG00000009518	pum1	100	81.205	ENSPCOG00000004398	PUM1	100	80.817	Propithecus_coquereli
ENSPNYG00000009518	pum1	100	75.663	ENSPVAG00000005207	PUM1	97	72.659	Pteropus_vampyrus
ENSPNYG00000009518	pum1	100	82.542	ENSPNAG00000026728	pum1	100	82.563	Pygocentrus_nattereri
ENSPNYG00000009518	pum1	100	75.455	ENSRNOG00000011709	Pum1	100	74.089	Rattus_norvegicus
ENSPNYG00000009518	pum1	100	81.446	ENSRBIG00000042521	PUM1	100	81.064	Rhinopithecus_bieti
ENSPNYG00000009518	pum1	100	81.840	ENSRROG00000020156	PUM1	100	81.064	Rhinopithecus_roxellana
ENSPNYG00000009518	pum1	100	81.446	ENSSBOG00000032037	PUM1	100	81.064	Saimiri_boliviensis_boliviensis
ENSPNYG00000009518	pum1	100	81.928	ENSSHAG00000010918	PUM1	100	74.606	Sarcophilus_harrisii
ENSPNYG00000009518	pum1	100	97.163	ENSSMAG00000010918	pum1	100	97.163	Scophthalmus_maximus
ENSPNYG00000009518	pum1	100	98.968	ENSSDUG00000009021	pum1	100	98.968	Seriola_dumerili
ENSPNYG00000009518	pum1	94	98.836	ENSSLDG00000009667	pum1	100	98.836	Seriola_lalandi_dorsalis
ENSPNYG00000009518	pum1	92	85.577	ENSSARG00000003055	PUM1	88	79.234	Sorex_araneus
ENSPNYG00000009518	pum1	100	82.169	ENSSPUG00000006267	PUM1	100	74.752	Sphenodon_punctatus
ENSPNYG00000009518	pum1	100	99.312	ENSSPAG00000016636	pum1	100	99.312	Stegastes_partitus
ENSPNYG00000009518	pum1	100	88.934	ENSSSCG00000003591	PUM1	95	89.336	Sus_scrofa
ENSPNYG00000009518	pum1	100	97.420	ENSTRUG00000013121	pum1	100	98.375	Takifugu_rubripes
ENSPNYG00000009518	pum1	100	96.410	ENSTNIG00000016983	pum1	99	96.410	Tetraodon_nigroviridis
ENSPNYG00000009518	pum1	87	90.244	ENSTBEG00000013810	PUM1	89	90.244	Tupaia_belangeri
ENSPNYG00000009518	pum1	100	81.446	ENSTTRG00000007436	PUM1	88	76.937	Tursiops_truncatus
ENSPNYG00000009518	pum1	98	77.670	ENSUAMG00000018262	-	100	72.464	Ursus_americanus
ENSPNYG00000009518	pum1	100	74.900	ENSUMAG00000009211	PUM1	89	72.445	Ursus_maritimus
ENSPNYG00000009518	pum1	92	83.704	ENSVPAG00000005902	PUM1	92	81.559	Vicugna_pacos
ENSPNYG00000009518	pum1	100	81.840	ENSVVUG00000014631	PUM1	100	76.225	Vulpes_vulpes
ENSPNYG00000009518	pum1	100	73.245	ENSXETG00000012904	pum1	99	71.795	Xenopus_tropicalis
ENSPNYG00000009518	pum1	100	98.108	ENSXMAG00000002945	pum1	100	98.201	Xiphophorus_maculatus