EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPNYG00000009607 (Gene tree)
Gene ID: 102205462
Gene Symbol: prdm12b
Alias: zgc:101606
Full Name: PR/SET domain 12
Gene Type: protein_coding
Species: Pundamilia_nyererei
Status: putative
Strand: Plus strand
Length: 3015 bases
Position: chrJH419207.1:10089163-10092177
Accession: 102205462
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPNYP00000012669	zf-C2H2	PF00096.26	3.6e-11	1	2
ENSPNYP00000012669	zf-C2H2	PF00096.26	3.6e-11	2	2
ENSPNYP00000012669	zf-met	PF12874.7	7.9e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPNYT00000012978	-	1125	XM_005720479	ENSPNYP00000012669	374 (aa)	XP_005720536	-

Gene Model

Click here to download ENSPNYG00000009607's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPNYG00000009607's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPNYG00000009607	prdm12b	69	36.594	ENSPNYG00000001938	prdm14	55	36.226
ENSPNYG00000009607	prdm12b	100	76.179	ENSPNYG00000013589	-	100	76.923
ENSPNYG00000009607	prdm12b	68	41.176	ENSPNYG00000012194	prdm5	96	42.105

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPNYG00000009607	prdm12b	93	80.229	ENSG00000130711	PRDM12	99	75.131	Homo_sapiens
ENSPNYG00000009607	prdm12b	100	90.885	ENSAPOG00000016051	prdm12b	100	91.667	Acanthochromis_polyacanthus
ENSPNYG00000009607	prdm12b	100	68.170	ENSAPOG00000018234	-	100	68.170	Acanthochromis_polyacanthus
ENSPNYG00000009607	prdm12b	90	79.525	ENSAMEG00000016234	PRDM12	99	80.473	Ailuropoda_melanoleuca
ENSPNYG00000009607	prdm12b	100	79.028	ENSACIG00000005193	-	100	79.487	Amphilophus_citrinellus
ENSPNYG00000009607	prdm12b	100	94.667	ENSACIG00000019578	prdm12b	100	94.667	Amphilophus_citrinellus
ENSPNYG00000009607	prdm12b	100	92.308	ENSAOCG00000015040	prdm12b	100	93.103	Amphiprion_ocellaris
ENSPNYG00000009607	prdm12b	100	91.247	ENSAPEG00000015092	prdm12b	100	91.777	Amphiprion_percula
ENSPNYG00000009607	prdm12b	100	72.843	ENSAPEG00000022849	-	99	74.112	Amphiprion_percula
ENSPNYG00000009607	prdm12b	100	81.443	ENSATEG00000014595	-	100	81.959	Anabas_testudineus
ENSPNYG00000009607	prdm12b	94	79.718	ENSANAG00000020616	PRDM12	99	78.873	Aotus_nancymaae
ENSPNYG00000009607	prdm12b	100	92.246	ENSACLG00000011876	prdm12b	100	92.246	Astatotilapia_calliptera
ENSPNYG00000009607	prdm12b	100	76.559	ENSACLG00000007631	-	100	77.556	Astatotilapia_calliptera
ENSPNYG00000009607	prdm12b	100	81.627	ENSAMXG00000033665	prdm12b	100	81.890	Astyanax_mexicanus
ENSPNYG00000009607	prdm12b	100	79.841	ENSAMXG00000008540	PRDM12	100	79.841	Astyanax_mexicanus
ENSPNYG00000009607	prdm12b	93	79.943	ENSBTAG00000023797	PRDM12	99	76.330	Bos_taurus
ENSPNYG00000009607	prdm12b	93	80.516	ENSCJAG00000020540	PRDM12	99	75.789	Callithrix_jacchus
ENSPNYG00000009607	prdm12b	82	80.130	ENSCAFG00000023076	PRDM12	99	75.740	Canis_familiaris
ENSPNYG00000009607	prdm12b	93	79.943	ENSCAFG00020024046	PRDM12	99	76.053	Canis_lupus_dingo
ENSPNYG00000009607	prdm12b	93	79.943	ENSCHIG00000025005	PRDM12	99	76.393	Capra_hircus
ENSPNYG00000009607	prdm12b	87	80.183	ENSCPOG00000005901	PRDM12	95	80.183	Cavia_porcellus
ENSPNYG00000009607	prdm12b	93	80.516	ENSCCAG00000037485	PRDM12	99	75.789	Cebus_capucinus
ENSPNYG00000009607	prdm12b	93	80.516	ENSCATG00000020327	PRDM12	99	75.789	Cercocebus_atys
ENSPNYG00000009607	prdm12b	91	80.233	ENSCLAG00000005499	PRDM12	90	80.233	Chinchilla_lanigera
ENSPNYG00000009607	prdm12b	93	80.516	ENSCSAG00000014756	PRDM12	99	75.789	Chlorocebus_sabaeus
ENSPNYG00000009607	prdm12b	100	77.660	ENSCPBG00000022628	PRDM12	99	77.660	Chrysemys_picta_bellii
ENSPNYG00000009607	prdm12b	93	79.943	ENSCGRG00001015005	Prdm12	99	75.853	Cricetulus_griseus_chok1gshd
ENSPNYG00000009607	prdm12b	100	78.205	ENSCVAG00000000944	-	100	78.974	Cyprinodon_variegatus
ENSPNYG00000009607	prdm12b	100	88.095	ENSCVAG00000017166	prdm12b	100	89.153	Cyprinodon_variegatus
ENSPNYG00000009607	prdm12b	100	83.069	ENSDARG00000007430	prdm12b	100	83.069	Danio_rerio
ENSPNYG00000009607	prdm12b	93	79.429	ENSDNOG00000042302	PRDM12	99	75.862	Dasypus_novemcinctus
ENSPNYG00000009607	prdm12b	93	62.334	ENSEBUG00000016780	prdm12b	83	62.865	Eptatretus_burgeri
ENSPNYG00000009607	prdm12b	94	78.873	ENSEASG00005008472	PRDM12	99	76.053	Equus_asinus_asinus
ENSPNYG00000009607	prdm12b	94	78.592	ENSECAG00000005933	PRDM12	99	75.789	Equus_caballus
ENSPNYG00000009607	prdm12b	100	82.804	ENSELUG00000013674	PRDM12	100	85.185	Esox_lucius
ENSPNYG00000009607	prdm12b	100	82.105	ENSELUG00000009905	prdm12b	100	81.316	Esox_lucius
ENSPNYG00000009607	prdm12b	93	79.943	ENSFCAG00000043086	PRDM12	99	76.053	Felis_catus
ENSPNYG00000009607	prdm12b	100	78.989	ENSFALG00000001445	PRDM12	89	78.989	Ficedula_albicollis
ENSPNYG00000009607	prdm12b	100	88.127	ENSFHEG00000003944	prdm12b	100	89.182	Fundulus_heteroclitus
ENSPNYG00000009607	prdm12b	100	75.628	ENSFHEG00000007746	-	100	75.312	Fundulus_heteroclitus
ENSPNYG00000009607	prdm12b	100	82.812	ENSGMOG00000011797	prdm12b	99	83.957	Gadus_morhua
ENSPNYG00000009607	prdm12b	100	78.989	ENSGALG00000003895	PRDM12	99	78.989	Gallus_gallus
ENSPNYG00000009607	prdm12b	100	88.189	ENSGAFG00000010827	prdm12b	99	88.189	Gambusia_affinis
ENSPNYG00000009607	prdm12b	100	89.446	ENSGACG00000016713	prdm12b	99	88.391	Gasterosteus_aculeatus
ENSPNYG00000009607	prdm12b	100	77.926	ENSGAGG00000014083	PRDM12	99	77.926	Gopherus_agassizii
ENSPNYG00000009607	prdm12b	93	79.943	ENSGGOG00000010568	PRDM12	99	75.066	Gorilla_gorilla
ENSPNYG00000009607	prdm12b	100	76.559	ENSHBUG00000022537	-	93	77.556	Haplochromis_burtoni
ENSPNYG00000009607	prdm12b	100	99.198	ENSHBUG00000022878	prdm12b	100	99.198	Haplochromis_burtoni
ENSPNYG00000009607	prdm12b	91	80.233	ENSHGLG00000013939	PRDM12	99	75.263	Heterocephalus_glaber_female
ENSPNYG00000009607	prdm12b	100	72.966	ENSHCOG00000021167	-	100	72.966	Hippocampus_comes
ENSPNYG00000009607	prdm12b	90	86.087	ENSHCOG00000003663	prdm12b	100	81.061	Hippocampus_comes
ENSPNYG00000009607	prdm12b	100	82.850	ENSIPUG00000017053	prdm12b	100	82.850	Ictalurus_punctatus
ENSPNYG00000009607	prdm12b	100	77.807	ENSIPUG00000019544	PRDM12	100	77.005	Ictalurus_punctatus
ENSPNYG00000009607	prdm12b	99	76.408	ENSSTOG00000005986	PRDM12	93	76.408	Ictidomys_tridecemlineatus
ENSPNYG00000009607	prdm12b	91	80.523	ENSJJAG00000005424	Prdm12	99	80.523	Jaculus_jaculus
ENSPNYG00000009607	prdm12b	94	79.096	ENSKMAG00000021205	-	94	78.492	Kryptolebias_marmoratus
ENSPNYG00000009607	prdm12b	100	82.512	ENSKMAG00000016921	prdm12b	100	83.005	Kryptolebias_marmoratus
ENSPNYG00000009607	prdm12b	100	87.273	ENSLBEG00000017769	prdm12b	100	87.273	Labrus_bergylta
ENSPNYG00000009607	prdm12b	100	79.896	ENSLBEG00000007776	-	100	80.157	Labrus_bergylta
ENSPNYG00000009607	prdm12b	100	78.191	ENSLACG00000017560	PRDM12	99	78.191	Latimeria_chalumnae
ENSPNYG00000009607	prdm12b	100	84.293	ENSLOCG00000005429	prdm12b	100	84.293	Lepisosteus_oculatus
ENSPNYG00000009607	prdm12b	93	80.980	ENSLAFG00000006979	PRDM12	92	77.839	Loxodonta_africana
ENSPNYG00000009607	prdm12b	100	75.393	ENSMFAG00000040322	PRDM12	99	75.131	Macaca_fascicularis
ENSPNYG00000009607	prdm12b	93	80.516	ENSMNEG00000037234	PRDM12	99	75.789	Macaca_nemestrina
ENSPNYG00000009607	prdm12b	100	90.765	ENSMAMG00000013212	prdm12b	100	90.501	Mastacembelus_armatus
ENSPNYG00000009607	prdm12b	100	74.314	ENSMAMG00000018988	-	100	74.813	Mastacembelus_armatus
ENSPNYG00000009607	prdm12b	100	76.179	ENSMZEG00005000415	PRDM12	100	76.923	Maylandia_zebra
ENSPNYG00000009607	prdm12b	98	78.649	ENSMGAG00000005438	PRDM12	98	78.649	Meleagris_gallopavo
ENSPNYG00000009607	prdm12b	100	76.579	ENSMAUG00000013040	Prdm12	99	75.789	Mesocricetus_auratus
ENSPNYG00000009607	prdm12b	94	79.320	ENSMICG00000015480	PRDM12	99	76.127	Microcebus_murinus
ENSPNYG00000009607	prdm12b	100	77.128	ENSMOCG00000021026	Prdm12	93	79.437	Microtus_ochrogaster
ENSPNYG00000009607	prdm12b	100	78.249	ENSMODG00000012108	PRDM12	99	78.249	Monodelphis_domestica
ENSPNYG00000009607	prdm12b	84	86.207	ENSMALG00000021901	prdm12b	99	74.406	Monopterus_albus
ENSPNYG00000009607	prdm12b	93	79.656	MGP_CAROLIEiJ_G0023414	Prdm12	99	75.789	Mus_caroli
ENSPNYG00000009607	prdm12b	93	79.656	ENSMUSG00000079466	Prdm12	99	75.789	Mus_musculus
ENSPNYG00000009607	prdm12b	93	79.656	MGP_PahariEiJ_G0024871	Prdm12	99	75.789	Mus_pahari
ENSPNYG00000009607	prdm12b	93	79.656	MGP_SPRETEiJ_G0024331	Prdm12	99	75.789	Mus_spretus
ENSPNYG00000009607	prdm12b	90	81.176	ENSNGAG00000018480	Prdm12	99	76.064	Nannospalax_galili
ENSPNYG00000009607	prdm12b	100	73.560	ENSNBRG00000024312	-	100	74.084	Neolamprologus_brichardi
ENSPNYG00000009607	prdm12b	100	99.200	ENSNBRG00000006727	prdm12b	100	99.200	Neolamprologus_brichardi
ENSPNYG00000009607	prdm12b	100	70.822	ENSMEUG00000003828	PRDM12	99	70.822	Notamacropus_eugenii
ENSPNYG00000009607	prdm12b	91	80.523	ENSOPRG00000008680	PRDM12	99	80.523	Ochotona_princeps
ENSPNYG00000009607	prdm12b	94	78.592	ENSODEG00000016282	PRDM12	64	78.592	Octodon_degus
ENSPNYG00000009607	prdm12b	63	76.050	ENSOANG00000001043	PRDM12	100	76.050	Ornithorhynchus_anatinus
ENSPNYG00000009607	prdm12b	84	80.000	ENSOCUG00000008241	PRDM12	96	80.000	Oryctolagus_cuniculus
ENSPNYG00000009607	prdm12b	100	78.117	ENSORLG00000017558	-	100	79.135	Oryzias_latipes
ENSPNYG00000009607	prdm12b	100	88.918	ENSORLG00000007114	prdm12b	99	88.127	Oryzias_latipes
ENSPNYG00000009607	prdm12b	100	87.402	ENSORLG00020019565	prdm12b	99	87.927	Oryzias_latipes_hni
ENSPNYG00000009607	prdm12b	100	78.372	ENSORLG00020013167	-	100	79.135	Oryzias_latipes_hni
ENSPNYG00000009607	prdm12b	100	88.095	ENSORLG00015007621	prdm12b	99	88.360	Oryzias_latipes_hsok
ENSPNYG00000009607	prdm12b	100	77.863	ENSORLG00015003435	-	100	78.880	Oryzias_latipes_hsok
ENSPNYG00000009607	prdm12b	100	79.740	ENSOMEG00000007762	-	100	79.221	Oryzias_melastigma
ENSPNYG00000009607	prdm12b	100	88.482	ENSOMEG00000004134	prdm12b	99	89.791	Oryzias_melastigma
ENSPNYG00000009607	prdm12b	92	80.115	ENSOGAG00000007557	PRDM12	99	80.115	Otolemur_garnettii
ENSPNYG00000009607	prdm12b	80	79.470	ENSPPAG00000031506	-	97	78.477	Pan_paniscus
ENSPNYG00000009607	prdm12b	100	70.822	ENSPPRG00000023024	PRDM12	92	70.822	Panthera_pardus
ENSPNYG00000009607	prdm12b	93	80.229	ENSPTRG00000021475	PRDM12	99	75.328	Pan_troglodytes
ENSPNYG00000009607	prdm12b	93	80.229	ENSPTRG00000043324	-	99	75.328	Pan_troglodytes
ENSPNYG00000009607	prdm12b	93	80.516	ENSPANG00000025967	PRDM12	99	75.789	Papio_anubis
ENSPNYG00000009607	prdm12b	90	80.826	ENSPKIG00000004305	PRDM12	94	81.416	Paramormyrops_kingsleyae
ENSPNYG00000009607	prdm12b	100	84.921	ENSPKIG00000007228	prdm12b	100	84.392	Paramormyrops_kingsleyae
ENSPNYG00000009607	prdm12b	100	77.926	ENSPSIG00000006739	PRDM12	99	77.926	Pelodiscus_sinensis
ENSPNYG00000009607	prdm12b	100	74.937	ENSPMGG00000002356	-	100	74.500	Periophthalmus_magnuspinnatus
ENSPNYG00000009607	prdm12b	100	88.564	ENSPMGG00000008867	prdm12b	99	88.564	Periophthalmus_magnuspinnatus
ENSPNYG00000009607	prdm12b	91	81.395	ENSPEMG00000009969	Prdm12	91	80.115	Peromyscus_maniculatus_bairdii
ENSPNYG00000009607	prdm12b	100	78.249	ENSPCIG00000024119	PRDM12	99	78.249	Phascolarctos_cinereus
ENSPNYG00000009607	prdm12b	100	88.654	ENSPFOG00000019841	prdm12b	100	87.863	Poecilia_formosa
ENSPNYG00000009607	prdm12b	100	86.979	ENSPLAG00000016626	prdm12b	99	87.760	Poecilia_latipinna
ENSPNYG00000009607	prdm12b	96	87.568	ENSPMEG00000016698	prdm12b	99	87.838	Poecilia_mexicana
ENSPNYG00000009607	prdm12b	100	86.753	ENSPREG00000015073	prdm12b	99	87.273	Poecilia_reticulata
ENSPNYG00000009607	prdm12b	95	74.521	ENSPREG00000003211	-	94	74.521	Poecilia_reticulata
ENSPNYG00000009607	prdm12b	96	78.947	ENSPPYG00000019694	PRDM12	98	78.116	Pongo_abelii
ENSPNYG00000009607	prdm12b	93	79.943	ENSPCOG00000022255	PRDM12	99	75.853	Propithecus_coquereli
ENSPNYG00000009607	prdm12b	93	79.656	ENSPVAG00000001511	PRDM12	99	75.591	Pteropus_vampyrus
ENSPNYG00000009607	prdm12b	100	82.850	ENSPNAG00000024532	prdm12b	100	83.113	Pygocentrus_nattereri
ENSPNYG00000009607	prdm12b	100	78.590	ENSPNAG00000013396	PRDM12	100	78.068	Pygocentrus_nattereri
ENSPNYG00000009607	prdm12b	93	79.656	ENSRNOG00000009218	Prdm12	99	75.789	Rattus_norvegicus
ENSPNYG00000009607	prdm12b	88	81.627	ENSRBIG00000042712	PRDM12	98	75.269	Rhinopithecus_bieti
ENSPNYG00000009607	prdm12b	89	81.845	ENSRROG00000043554	PRDM12	99	80.952	Rhinopithecus_roxellana
ENSPNYG00000009607	prdm12b	100	77.778	ENSSHAG00000015972	PRDM12	99	77.778	Sarcophilus_harrisii
ENSPNYG00000009607	prdm12b	100	87.918	ENSSMAG00000003754	prdm12b	100	87.918	Scophthalmus_maximus
ENSPNYG00000009607	prdm12b	100	80.829	ENSSDUG00000019071	-	100	81.865	Seriola_dumerili
ENSPNYG00000009607	prdm12b	100	91.601	ENSSDUG00000023498	prdm12b	100	91.864	Seriola_dumerili
ENSPNYG00000009607	prdm12b	100	77.394	ENSSLDG00000013562	-	100	77.394	Seriola_lalandi_dorsalis
ENSPNYG00000009607	prdm12b	100	90.551	ENSSLDG00000009557	prdm12b	100	92.388	Seriola_lalandi_dorsalis
ENSPNYG00000009607	prdm12b	100	78.457	ENSSPUG00000013424	PRDM12	99	78.457	Sphenodon_punctatus
ENSPNYG00000009607	prdm12b	100	74.093	ENSSPAG00000022420	-	100	75.648	Stegastes_partitus
ENSPNYG00000009607	prdm12b	100	92.857	ENSSPAG00000018824	prdm12b	100	93.651	Stegastes_partitus
ENSPNYG00000009607	prdm12b	93	79.943	ENSSSCG00000005703	PRDM12	99	76.053	Sus_scrofa
ENSPNYG00000009607	prdm12b	100	87.500	ENSTRUG00000018659	prdm12b	100	87.500	Takifugu_rubripes
ENSPNYG00000009607	prdm12b	100	77.719	ENSTRUG00000013239	-	100	77.719	Takifugu_rubripes
ENSPNYG00000009607	prdm12b	100	86.436	ENSTNIG00000009020	prdm12b	99	86.436	Tetraodon_nigroviridis
ENSPNYG00000009607	prdm12b	100	75.332	ENSTNIG00000005859	-	99	75.332	Tetraodon_nigroviridis
ENSPNYG00000009607	prdm12b	93	79.943	ENSUAMG00000009653	PRDM12	94	78.873	Ursus_americanus
ENSPNYG00000009607	prdm12b	92	80.115	ENSVVUG00000027662	PRDM12	79	80.115	Vulpes_vulpes
ENSPNYG00000009607	prdm12b	100	88.654	ENSXCOG00000002836	prdm12b	99	89.182	Xiphophorus_couchianus
ENSPNYG00000009607	prdm12b	100	87.958	ENSXMAG00000005537	prdm12b	100	88.482	Xiphophorus_maculatus
ENSPNYG00000009607	prdm12b	100	76.368	ENSXMAG00000028012	-	100	76.543	Xiphophorus_maculatus