EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPNYG00000009660 (Gene tree)
Gene ID: 102214023
Gene Symbol: lig4
Alias: zgc:165595
Full Name: DNA ligase 4
Gene Type: protein_coding
Species: Pundamilia_nyererei
Status: putative
Strand: Minus strand
Length: 7824 bases
Position: chrJH419635.1:132331-140154
Accession: 102214023
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPNYP00000012733	RNA_ligase	PF09414.10	1.3e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPNYT00000013046	-	4540	XM_005753462	ENSPNYP00000012733	910 (aa)	XP_005753519	UPI0003AF8588

Gene Model

Click here to download ENSPNYG00000009660's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPNYG00000009660's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPNYG00000009660	lig4	99	65.897	ENSG00000174405	LIG4	99	66.429	Homo_sapiens
ENSPNYG00000009660	lig4	99	90.209	ENSAPOG00000000866	lig4	100	90.110	Acanthochromis_polyacanthus
ENSPNYG00000009660	lig4	99	64.262	ENSAMEG00000019685	LIG4	99	64.262	Ailuropoda_melanoleuca
ENSPNYG00000009660	lig4	100	92.967	ENSACIG00000018309	lig4	100	92.967	Amphilophus_citrinellus
ENSPNYG00000009660	lig4	99	90.319	ENSAOCG00000011768	lig4	100	90.220	Amphiprion_ocellaris
ENSPNYG00000009660	lig4	100	90.220	ENSAPEG00000017815	lig4	100	90.220	Amphiprion_percula
ENSPNYG00000009660	lig4	99	88.106	ENSATEG00000005583	lig4	99	88.106	Anabas_testudineus
ENSPNYG00000009660	lig4	96	67.200	ENSAPLG00000001673	LIG4	99	67.200	Anas_platyrhynchos
ENSPNYG00000009660	lig4	99	67.550	ENSACAG00000014566	LIG4	99	67.550	Anolis_carolinensis
ENSPNYG00000009660	lig4	99	65.457	ENSANAG00000012446	LIG4	99	65.457	Aotus_nancymaae
ENSPNYG00000009660	lig4	100	99.670	ENSACLG00000027051	lig4	100	99.670	Astatotilapia_calliptera
ENSPNYG00000009660	lig4	99	80.174	ENSAMXG00000008192	lig4	95	80.174	Astyanax_mexicanus
ENSPNYG00000009660	lig4	99	65.275	ENSBTAG00000015868	LIG4	99	65.275	Bos_taurus
ENSPNYG00000009660	lig4	99	65.017	ENSCJAG00000014689	LIG4	99	65.017	Callithrix_jacchus
ENSPNYG00000009660	lig4	99	64.945	ENSCAFG00000006031	LIG4	99	64.945	Canis_familiaris
ENSPNYG00000009660	lig4	99	64.945	ENSCAFG00020021230	LIG4	99	64.945	Canis_lupus_dingo
ENSPNYG00000009660	lig4	99	65.165	ENSCHIG00000001019	LIG4	99	65.165	Capra_hircus
ENSPNYG00000009660	lig4	98	65.078	ENSCAPG00000006284	LIG4	99	65.078	Cavia_aperea
ENSPNYG00000009660	lig4	99	64.906	ENSCPOG00000014266	LIG4	99	64.906	Cavia_porcellus
ENSPNYG00000009660	lig4	99	65.677	ENSCCAG00000019971	LIG4	99	65.677	Cebus_capucinus
ENSPNYG00000009660	lig4	98	65.521	ENSCATG00000021075	LIG4	99	65.521	Cercocebus_atys
ENSPNYG00000009660	lig4	98	65.743	ENSCLAG00000003376	LIG4	99	65.743	Chinchilla_lanigera
ENSPNYG00000009660	lig4	98	65.521	ENSCSAG00000000211	LIG4	99	65.521	Chlorocebus_sabaeus
ENSPNYG00000009660	lig4	98	68.556	ENSCPBG00000023291	LIG4	99	67.908	Chrysemys_picta_bellii
ENSPNYG00000009660	lig4	70	47.095	ENSCING00000009536	-	99	47.095	Ciona_intestinalis
ENSPNYG00000009660	lig4	83	45.000	ENSCSAVG00000010336	-	98	45.000	Ciona_savignyi
ENSPNYG00000009660	lig4	98	65.410	ENSCANG00000005805	LIG4	99	65.410	Colobus_angolensis_palliatus
ENSPNYG00000009660	lig4	99	65.055	ENSCGRG00001012072	Lig4	99	64.732	Cricetulus_griseus_chok1gshd
ENSPNYG00000009660	lig4	99	65.055	ENSCGRG00000013417	Lig4	99	64.732	Cricetulus_griseus_crigri
ENSPNYG00000009660	lig4	97	84.893	ENSCSEG00000013905	lig4	96	84.893	Cynoglossus_semilaevis
ENSPNYG00000009660	lig4	100	87.377	ENSCVAG00000007896	lig4	100	87.377	Cyprinodon_variegatus
ENSPNYG00000009660	lig4	99	80.198	ENSDARG00000060620	lig4	99	80.198	Danio_rerio
ENSPNYG00000009660	lig4	99	65.385	ENSDNOG00000000513	LIG4	99	65.385	Dasypus_novemcinctus
ENSPNYG00000009660	lig4	98	65.632	ENSDORG00000027303	Lig4	99	65.632	Dipodomys_ordii
ENSPNYG00000009660	lig4	93	30.821	FBgn0030506	Lig4	93	30.934	Drosophila_melanogaster
ENSPNYG00000009660	lig4	98	63.152	ENSETEG00000015563	LIG4	99	63.374	Echinops_telfairi
ENSPNYG00000009660	lig4	99	44.444	ENSEBUG00000014243	lig4	99	44.025	Eptatretus_burgeri
ENSPNYG00000009660	lig4	99	64.945	ENSEASG00005022073	LIG4	99	64.945	Equus_asinus_asinus
ENSPNYG00000009660	lig4	99	65.165	ENSECAG00000003257	LIG4	99	65.055	Equus_caballus
ENSPNYG00000009660	lig4	98	83.315	ENSELUG00000006787	lig4	99	83.426	Esox_lucius
ENSPNYG00000009660	lig4	99	64.396	ENSFCAG00000031985	LIG4	99	64.396	Felis_catus
ENSPNYG00000009660	lig4	87	69.686	ENSFALG00000004214	LIG4	97	69.686	Ficedula_albicollis
ENSPNYG00000009660	lig4	99	64.136	ENSFDAG00000008973	LIG4	99	64.136	Fukomys_damarensis
ENSPNYG00000009660	lig4	99	88.242	ENSFHEG00000007398	lig4	90	88.242	Fundulus_heteroclitus
ENSPNYG00000009660	lig4	85	77.249	ENSGMOG00000012843	lig4	99	77.548	Gadus_morhua
ENSPNYG00000009660	lig4	99	65.862	ENSGALG00000016854	LIG4	99	65.862	Gallus_gallus
ENSPNYG00000009660	lig4	99	86.637	ENSGAFG00000019779	lig4	96	86.966	Gambusia_affinis
ENSPNYG00000009660	lig4	99	84.309	ENSGACG00000014135	lig4	99	84.309	Gasterosteus_aculeatus
ENSPNYG00000009660	lig4	99	65.677	ENSGGOG00000027771	LIG4	99	65.677	Gorilla_gorilla
ENSPNYG00000009660	lig4	100	99.451	ENSHBUG00000006245	lig4	100	99.451	Haplochromis_burtoni
ENSPNYG00000009660	lig4	99	64.537	ENSHGLG00000000718	LIG4	99	64.537	Heterocephalus_glaber_female
ENSPNYG00000009660	lig4	99	64.537	ENSHGLG00100003265	LIG4	99	64.537	Heterocephalus_glaber_male
ENSPNYG00000009660	lig4	99	81.229	ENSHCOG00000012010	lig4	99	81.229	Hippocampus_comes
ENSPNYG00000009660	lig4	100	78.132	ENSIPUG00000013748	lig4	100	78.132	Ictalurus_punctatus
ENSPNYG00000009660	lig4	99	65.127	ENSSTOG00000024303	LIG4	99	64.803	Ictidomys_tridecemlineatus
ENSPNYG00000009660	lig4	99	65.093	ENSJJAG00000006750	Lig4	99	64.661	Jaculus_jaculus
ENSPNYG00000009660	lig4	99	84.598	ENSKMAG00000001149	lig4	99	84.598	Kryptolebias_marmoratus
ENSPNYG00000009660	lig4	91	88.121	ENSLBEG00000014578	lig4	99	88.121	Labrus_bergylta
ENSPNYG00000009660	lig4	99	68.277	ENSLACG00000003282	LIG4	99	68.277	Latimeria_chalumnae
ENSPNYG00000009660	lig4	99	72.588	ENSLOCG00000008901	lig4	99	72.588	Lepisosteus_oculatus
ENSPNYG00000009660	lig4	99	64.215	ENSLAFG00000031152	LIG4	99	64.215	Loxodonta_africana
ENSPNYG00000009660	lig4	98	65.521	ENSMFAG00000037235	LIG4	99	65.521	Macaca_fascicularis
ENSPNYG00000009660	lig4	98	65.410	ENSMMUG00000008874	LIG4	99	65.410	Macaca_mulatta
ENSPNYG00000009660	lig4	98	65.521	ENSMNEG00000023575	LIG4	99	65.521	Macaca_nemestrina
ENSPNYG00000009660	lig4	98	65.410	ENSMLEG00000026720	LIG4	99	65.410	Mandrillus_leucophaeus
ENSPNYG00000009660	lig4	100	88.242	ENSMAMG00000008472	lig4	99	88.242	Mastacembelus_armatus
ENSPNYG00000009660	lig4	100	99.451	ENSMZEG00005001855	lig4	100	99.451	Maylandia_zebra
ENSPNYG00000009660	lig4	99	65.862	ENSMGAG00000015532	LIG4	99	65.862	Meleagris_gallopavo
ENSPNYG00000009660	lig4	99	63.806	ENSMOCG00000019000	Lig4	99	63.806	Microtus_ochrogaster
ENSPNYG00000009660	lig4	100	86.813	ENSMMOG00000004390	lig4	100	86.813	Mola_mola
ENSPNYG00000009660	lig4	99	66.813	ENSMODG00000025064	LIG4	99	66.813	Monodelphis_domestica
ENSPNYG00000009660	lig4	100	87.253	ENSMALG00000008555	lig4	100	87.253	Monopterus_albus
ENSPNYG00000009660	lig4	99	65.127	MGP_CAROLIEiJ_G0030809	Lig4	99	64.803	Mus_caroli
ENSPNYG00000009660	lig4	99	64.686	ENSMUSG00000049717	Lig4	99	64.474	Mus_musculus
ENSPNYG00000009660	lig4	99	64.686	MGP_PahariEiJ_G0021270	Lig4	99	64.576	Mus_pahari
ENSPNYG00000009660	lig4	99	64.906	MGP_SPRETEiJ_G0031917	Lig4	99	64.583	Mus_spretus
ENSPNYG00000009660	lig4	99	64.945	ENSMPUG00000018675	LIG4	99	64.945	Mustela_putorius_furo
ENSPNYG00000009660	lig4	99	65.165	ENSMLUG00000001267	LIG4	99	65.165	Myotis_lucifugus
ENSPNYG00000009660	lig4	99	65.237	ENSNGAG00000013258	Lig4	99	65.127	Nannospalax_galili
ENSPNYG00000009660	lig4	100	98.681	ENSNBRG00000021252	lig4	100	98.681	Neolamprologus_brichardi
ENSPNYG00000009660	lig4	99	65.347	ENSNLEG00000007888	LIG4	99	65.347	Nomascus_leucogenys
ENSPNYG00000009660	lig4	98	64.634	ENSOPRG00000005765	LIG4	99	64.523	Ochotona_princeps
ENSPNYG00000009660	lig4	98	64.523	ENSODEG00000019683	LIG4	99	64.523	Octodon_degus
ENSPNYG00000009660	lig4	100	97.473	ENSONIG00000011969	lig4	99	97.473	Oreochromis_niloticus
ENSPNYG00000009660	lig4	99	64.906	ENSOCUG00000015734	LIG4	99	64.796	Oryctolagus_cuniculus
ENSPNYG00000009660	lig4	99	85.291	ENSORLG00000004041	lig4	99	85.291	Oryzias_latipes
ENSPNYG00000009660	lig4	99	85.181	ENSORLG00020019607	lig4	99	85.181	Oryzias_latipes_hni
ENSPNYG00000009660	lig4	99	85.291	ENSORLG00015017754	lig4	99	85.291	Oryzias_latipes_hsok
ENSPNYG00000009660	lig4	75	89.650	ENSOMEG00000003459	lig4	99	89.650	Oryzias_melastigma
ENSPNYG00000009660	lig4	99	65.824	ENSOGAG00000032120	LIG4	99	65.824	Otolemur_garnettii
ENSPNYG00000009660	lig4	81	69.355	ENSOARG00000005590	LIG4	98	69.355	Ovis_aries
ENSPNYG00000009660	lig4	99	65.677	ENSPPAG00000032998	LIG4	99	65.677	Pan_paniscus
ENSPNYG00000009660	lig4	99	64.835	ENSPPRG00000017804	LIG4	99	64.835	Panthera_pardus
ENSPNYG00000009660	lig4	99	64.725	ENSPTIG00000010051	LIG4	99	64.725	Panthera_tigris_altaica
ENSPNYG00000009660	lig4	99	65.787	ENSPTRG00000006025	LIG4	99	65.787	Pan_troglodytes
ENSPNYG00000009660	lig4	98	65.632	ENSPANG00000007562	LIG4	99	65.632	Papio_anubis
ENSPNYG00000009660	lig4	100	77.936	ENSPKIG00000011645	lig4	99	77.936	Paramormyrops_kingsleyae
ENSPNYG00000009660	lig4	99	68.287	ENSPSIG00000001504	LIG4	99	68.287	Pelodiscus_sinensis
ENSPNYG00000009660	lig4	98	81.187	ENSPMGG00000013486	lig4	99	80.308	Periophthalmus_magnuspinnatus
ENSPNYG00000009660	lig4	99	64.396	ENSPEMG00000000076	Lig4	99	64.396	Peromyscus_maniculatus_bairdii
ENSPNYG00000009660	lig4	99	65.714	ENSPCIG00000021882	LIG4	99	65.714	Phascolarctos_cinereus
ENSPNYG00000009660	lig4	100	87.500	ENSPFOG00000000797	lig4	99	87.925	Poecilia_formosa
ENSPNYG00000009660	lig4	100	87.390	ENSPLAG00000001196	lig4	99	87.816	Poecilia_latipinna
ENSPNYG00000009660	lig4	100	87.500	ENSPMEG00000021353	lig4	99	87.925	Poecilia_mexicana
ENSPNYG00000009660	lig4	100	87.061	ENSPREG00000007323	lig4	99	87.486	Poecilia_reticulata
ENSPNYG00000009660	lig4	99	65.127	ENSPPYG00000005540	LIG4	99	65.127	Pongo_abelii
ENSPNYG00000009660	lig4	99	64.563	ENSPVAG00000016403	LIG4	99	64.238	Pteropus_vampyrus
ENSPNYG00000009660	lig4	99	81.105	ENSPNAG00000028056	lig4	99	81.105	Pygocentrus_nattereri
ENSPNYG00000009660	lig4	99	81.105	ENSPNAG00000028069	LIG4	99	81.105	Pygocentrus_nattereri
ENSPNYG00000009660	lig4	99	64.576	ENSRNOG00000014605	Lig4	99	64.466	Rattus_norvegicus
ENSPNYG00000009660	lig4	98	64.745	ENSRBIG00000039962	LIG4	99	64.745	Rhinopithecus_bieti
ENSPNYG00000009660	lig4	98	65.410	ENSRROG00000006040	LIG4	99	65.410	Rhinopithecus_roxellana
ENSPNYG00000009660	lig4	99	65.127	ENSSBOG00000019029	LIG4	99	65.127	Saimiri_boliviensis_boliviensis
ENSPNYG00000009660	lig4	99	63.626	ENSSHAG00000009525	LIG4	99	63.417	Sarcophilus_harrisii
ENSPNYG00000009660	lig4	100	79.011	ENSSFOG00015012835	lig4	100	79.011	Scleropages_formosus
ENSPNYG00000009660	lig4	100	83.407	ENSSMAG00000011267	lig4	100	83.407	Scophthalmus_maximus
ENSPNYG00000009660	lig4	100	87.527	ENSSDUG00000010343	lig4	99	87.842	Seriola_dumerili
ENSPNYG00000009660	lig4	100	86.543	ENSSLDG00000003239	lig4	99	86.637	Seriola_lalandi_dorsalis
ENSPNYG00000009660	lig4	98	63.425	ENSSARG00000006573	LIG4	99	63.425	Sorex_araneus
ENSPNYG00000009660	lig4	92	69.130	ENSSPUG00000002444	LIG4	99	69.130	Sphenodon_punctatus
ENSPNYG00000009660	lig4	99	90.209	ENSSPAG00000001609	lig4	99	90.209	Stegastes_partitus
ENSPNYG00000009660	lig4	99	65.050	ENSSSCG00000009540	LIG4	99	65.050	Sus_scrofa
ENSPNYG00000009660	lig4	99	66.630	ENSTGUG00000010795	LIG4	99	66.630	Taeniopygia_guttata
ENSPNYG00000009660	lig4	99	84.488	ENSTRUG00000009984	lig4	99	84.488	Takifugu_rubripes
ENSPNYG00000009660	lig4	99	82.398	ENSTNIG00000010348	lig4	99	82.618	Tetraodon_nigroviridis
ENSPNYG00000009660	lig4	99	65.567	ENSTBEG00000017741	LIG4	99	65.567	Tupaia_belangeri
ENSPNYG00000009660	lig4	99	64.906	ENSTTRG00000012660	LIG4	99	64.906	Tursiops_truncatus
ENSPNYG00000009660	lig4	99	64.341	ENSUAMG00000003773	LIG4	99	64.341	Ursus_americanus
ENSPNYG00000009660	lig4	99	66.959	ENSXETG00000002654	lig4	99	66.959	Xenopus_tropicalis
ENSPNYG00000009660	lig4	100	87.061	ENSXCOG00000017401	lig4	99	87.486	Xiphophorus_couchianus
ENSPNYG00000009660	lig4	100	87.281	ENSXMAG00000015142	lig4	99	87.706	Xiphophorus_maculatus