EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPNYG00000009669 (Gene tree)
Gene ID: 102193628
Gene Symbol: EDC3 (1 of many)
Alias: FLJ21128|LSM16|YJDC|YJEFN2|hYjeF_N2-15q23
Full Name: enhancer of mRNA decapping 3
Gene Type: protein_coding
Species: Pundamilia_nyererei
Status: putative
Strand: Plus strand
Length: 27166 bases
Position: chrJH419230.1:1972960-2000125
Accession: 102193628
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPNYP00000012741	FDF	PF09532.10	9e-08	1	1
ENSPNYP00000012741	LSM14	PF12701.7	2.3e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPNYT00000013054	EDC3 (1 of many)-201	3075	XM_005727590	ENSPNYP00000012741	468 (aa)	XP_005727647	UPI00032A1726

Gene Model

Click here to download ENSPNYG00000009669's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPNYG00000009669's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPNYG00000009669	EDC3	99	66.112	ENSPNYG00000021797	edc3	99	66.112

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPNYG00000009669	EDC3	99	58.398	ENSG00000179151	EDC3	100	77.778	Homo_sapiens
ENSPNYG00000009669	EDC3	99	72.561	ENSAPOG00000008655	EDC3	99	72.561	Acanthochromis_polyacanthus
ENSPNYG00000009669	EDC3	100	67.427	ENSAPOG00000010791	edc3	99	67.568	Acanthochromis_polyacanthus
ENSPNYG00000009669	EDC3	100	57.782	ENSAMEG00000008963	EDC3	100	57.782	Ailuropoda_melanoleuca
ENSPNYG00000009669	EDC3	100	87.525	ENSACIG00000005330	EDC3	100	88.330	Amphilophus_citrinellus
ENSPNYG00000009669	EDC3	99	65.904	ENSACIG00000017751	edc3	99	65.904	Amphilophus_citrinellus
ENSPNYG00000009669	EDC3	99	79.536	ENSAOCG00000009103	-	99	79.536	Amphiprion_ocellaris
ENSPNYG00000009669	EDC3	100	67.220	ENSAOCG00000005431	edc3	100	67.220	Amphiprion_ocellaris
ENSPNYG00000009669	EDC3	99	79.536	ENSAPEG00000007841	EDC3	99	79.536	Amphiprion_percula
ENSPNYG00000009669	EDC3	100	67.220	ENSAPEG00000000968	edc3	100	67.220	Amphiprion_percula
ENSPNYG00000009669	EDC3	100	66.598	ENSATEG00000015505	edc3	100	66.598	Anabas_testudineus
ENSPNYG00000009669	EDC3	99	78.178	ENSATEG00000004205	-	99	78.178	Anabas_testudineus
ENSPNYG00000009669	EDC3	79	67.663	ENSAPLG00000008957	EDC3	80	67.663	Anas_platyrhynchos
ENSPNYG00000009669	EDC3	76	54.250	ENSACAG00000000460	-	100	54.250	Anolis_carolinensis
ENSPNYG00000009669	EDC3	99	58.869	ENSANAG00000024078	EDC3	99	58.869	Aotus_nancymaae
ENSPNYG00000009669	EDC3	100	99.786	ENSACLG00000018776	-	100	99.786	Astatotilapia_calliptera
ENSPNYG00000009669	EDC3	99	66.112	ENSACLG00000007232	edc3	99	66.112	Astatotilapia_calliptera
ENSPNYG00000009669	EDC3	100	63.654	ENSAMXG00000001589	edc3	100	63.654	Astyanax_mexicanus
ENSPNYG00000009669	EDC3	99	58.869	ENSBTAG00000007308	EDC3	99	58.869	Bos_taurus
ENSPNYG00000009669	EDC3	99	58.869	ENSCJAG00000017681	EDC3	99	58.869	Callithrix_jacchus
ENSPNYG00000009669	EDC3	99	58.480	ENSCAFG00000017935	EDC3	100	58.171	Canis_familiaris
ENSPNYG00000009669	EDC3	99	58.480	ENSCAFG00020003909	EDC3	100	58.171	Canis_lupus_dingo
ENSPNYG00000009669	EDC3	99	58.674	ENSCHIG00000023658	EDC3	99	58.674	Capra_hircus
ENSPNYG00000009669	EDC3	99	59.180	ENSTSYG00000004822	EDC3	99	59.180	Carlito_syrichta
ENSPNYG00000009669	EDC3	99	58.285	ENSCPOG00000015595	EDC3	99	58.285	Cavia_porcellus
ENSPNYG00000009669	EDC3	99	58.674	ENSCCAG00000021663	EDC3	99	58.674	Cebus_capucinus
ENSPNYG00000009669	EDC3	99	58.285	ENSCATG00000037511	EDC3	99	58.285	Cercocebus_atys
ENSPNYG00000009669	EDC3	99	58.090	ENSCLAG00000005700	EDC3	99	58.090	Chinchilla_lanigera
ENSPNYG00000009669	EDC3	99	58.285	ENSCSAG00000014239	EDC3	99	58.285	Chlorocebus_sabaeus
ENSPNYG00000009669	EDC3	99	58.789	ENSCPBG00000024239	EDC3	99	58.789	Chrysemys_picta_bellii
ENSPNYG00000009669	EDC3	99	35.586	ENSCING00000022142	-	99	35.586	Ciona_intestinalis
ENSPNYG00000009669	EDC3	99	58.285	ENSCANG00000028699	EDC3	99	58.285	Colobus_angolensis_palliatus
ENSPNYG00000009669	EDC3	99	57.895	ENSCGRG00001013874	Edc3	99	57.895	Cricetulus_griseus_chok1gshd
ENSPNYG00000009669	EDC3	99	57.895	ENSCGRG00000011885	Edc3	99	57.895	Cricetulus_griseus_crigri
ENSPNYG00000009669	EDC3	99	67.360	ENSCSEG00000012996	edc3	99	67.360	Cynoglossus_semilaevis
ENSPNYG00000009669	EDC3	100	65.696	ENSCVAG00000008023	edc3	100	65.696	Cyprinodon_variegatus
ENSPNYG00000009669	EDC3	99	62.868	ENSDARG00000051931	edc3	99	62.868	Danio_rerio
ENSPNYG00000009669	EDC3	99	51.908	ENSDNOG00000030661	EDC3	99	51.908	Dasypus_novemcinctus
ENSPNYG00000009669	EDC3	71	77.778	ENSETEG00000002398	-	64	77.778	Echinops_telfairi
ENSPNYG00000009669	EDC3	99	58.480	ENSEASG00005005071	EDC3	99	58.480	Equus_asinus_asinus
ENSPNYG00000009669	EDC3	99	58.480	ENSECAG00000017994	EDC3	99	58.480	Equus_caballus
ENSPNYG00000009669	EDC3	100	64.124	ENSELUG00000005794	edc3	100	64.124	Esox_lucius
ENSPNYG00000009669	EDC3	100	67.585	ENSELUG00000007607	EDC3	100	67.585	Esox_lucius
ENSPNYG00000009669	EDC3	100	58.285	ENSFCAG00000002014	EDC3	100	58.285	Felis_catus
ENSPNYG00000009669	EDC3	98	57.968	ENSFALG00000004543	EDC3	96	57.968	Ficedula_albicollis
ENSPNYG00000009669	EDC3	99	58.594	ENSFDAG00000012582	EDC3	99	58.594	Fukomys_damarensis
ENSPNYG00000009669	EDC3	100	65.145	ENSFHEG00000009375	edc3	100	65.145	Fundulus_heteroclitus
ENSPNYG00000009669	EDC3	100	66.805	ENSGMOG00000002715	edc3	100	66.805	Gadus_morhua
ENSPNYG00000009669	EDC3	99	60.000	ENSGALG00000040181	EDC3	99	60.000	Gallus_gallus
ENSPNYG00000009669	EDC3	100	64.596	ENSGAFG00000014433	edc3	100	64.596	Gambusia_affinis
ENSPNYG00000009669	EDC3	99	64.865	ENSGACG00000009783	edc3	99	64.865	Gasterosteus_aculeatus
ENSPNYG00000009669	EDC3	99	67.059	ENSGACG00000014671	EDC3	99	67.255	Gasterosteus_aculeatus
ENSPNYG00000009669	EDC3	99	59.020	ENSGAGG00000023477	EDC3	99	59.020	Gopherus_agassizii
ENSPNYG00000009669	EDC3	99	58.090	ENSGGOG00000003552	EDC3	99	58.090	Gorilla_gorilla
ENSPNYG00000009669	EDC3	99	66.112	ENSHBUG00000003635	edc3	99	66.112	Haplochromis_burtoni
ENSPNYG00000009669	EDC3	100	100.000	ENSHBUG00000020817	EDC3	100	100.000	Haplochromis_burtoni
ENSPNYG00000009669	EDC3	99	63.958	ENSHCOG00000016834	edc3	99	65.063	Hippocampus_comes
ENSPNYG00000009669	EDC3	99	62.823	ENSIPUG00000005695	edc3	100	62.823	Ictalurus_punctatus
ENSPNYG00000009669	EDC3	99	58.984	ENSSTOG00000013936	EDC3	99	58.984	Ictidomys_tridecemlineatus
ENSPNYG00000009669	EDC3	99	58.480	ENSJJAG00000008074	Edc3	99	58.480	Jaculus_jaculus
ENSPNYG00000009669	EDC3	99	76.221	ENSKMAG00000001987	EDC3	99	76.221	Kryptolebias_marmoratus
ENSPNYG00000009669	EDC3	99	64.938	ENSKMAG00000001243	edc3	100	65.010	Kryptolebias_marmoratus
ENSPNYG00000009669	EDC3	99	65.073	ENSLBEG00000013435	edc3	99	65.073	Labrus_bergylta
ENSPNYG00000009669	EDC3	99	74.214	ENSLBEG00000017984	EDC3	99	74.214	Labrus_bergylta
ENSPNYG00000009669	EDC3	99	60.348	ENSLACG00000014149	EDC3	99	60.348	Latimeria_chalumnae
ENSPNYG00000009669	EDC3	99	59.600	ENSLOCG00000014625	edc3	100	57.968	Lepisosteus_oculatus
ENSPNYG00000009669	EDC3	100	58.398	ENSLAFG00000002992	EDC3	99	58.513	Loxodonta_africana
ENSPNYG00000009669	EDC3	99	58.090	ENSMFAG00000043074	EDC3	99	58.090	Macaca_fascicularis
ENSPNYG00000009669	EDC3	99	58.090	ENSMMUG00000011071	EDC3	99	58.090	Macaca_mulatta
ENSPNYG00000009669	EDC3	99	58.090	ENSMNEG00000035316	EDC3	99	58.090	Macaca_nemestrina
ENSPNYG00000009669	EDC3	99	58.285	ENSMLEG00000030372	EDC3	99	58.285	Mandrillus_leucophaeus
ENSPNYG00000009669	EDC3	100	65.353	ENSMAMG00000000505	edc3	100	65.353	Mastacembelus_armatus
ENSPNYG00000009669	EDC3	99	78.344	ENSMAMG00000005423	-	99	78.344	Mastacembelus_armatus
ENSPNYG00000009669	EDC3	100	97.704	ENSMZEG00005005654	EDC3	100	97.704	Maylandia_zebra
ENSPNYG00000009669	EDC3	99	65.904	ENSMZEG00005004892	edc3	99	65.904	Maylandia_zebra
ENSPNYG00000009669	EDC3	99	60.156	ENSMGAG00000002617	EDC3	99	60.156	Meleagris_gallopavo
ENSPNYG00000009669	EDC3	99	59.180	ENSMICG00000043190	EDC3	99	59.180	Microcebus_murinus
ENSPNYG00000009669	EDC3	99	58.008	ENSMOCG00000016205	Edc3	99	58.008	Microtus_ochrogaster
ENSPNYG00000009669	EDC3	99	66.528	ENSMMOG00000012278	edc3	99	66.528	Mola_mola
ENSPNYG00000009669	EDC3	99	58.789	ENSMODG00000009442	EDC3	99	58.789	Monodelphis_domestica
ENSPNYG00000009669	EDC3	100	66.598	ENSMALG00000008658	edc3	100	66.598	Monopterus_albus
ENSPNYG00000009669	EDC3	99	57.895	MGP_CAROLIEiJ_G0032280	Edc3	100	72.308	Mus_caroli
ENSPNYG00000009669	EDC3	99	58.090	ENSMUSG00000038957	Edc3	100	72.308	Mus_musculus
ENSPNYG00000009669	EDC3	99	58.398	MGP_PahariEiJ_G0015146	Edc3	100	72.308	Mus_pahari
ENSPNYG00000009669	EDC3	99	58.090	MGP_SPRETEiJ_G0033420	Edc3	100	72.308	Mus_spretus
ENSPNYG00000009669	EDC3	100	58.171	ENSMPUG00000017293	EDC3	100	58.171	Mustela_putorius_furo
ENSPNYG00000009669	EDC3	99	58.641	ENSMLUG00000016382	EDC3	99	58.641	Myotis_lucifugus
ENSPNYG00000009669	EDC3	99	58.008	ENSNGAG00000010923	Edc3	99	58.008	Nannospalax_galili
ENSPNYG00000009669	EDC3	100	65.353	ENSNBRG00000002434	edc3	99	65.489	Neolamprologus_brichardi
ENSPNYG00000009669	EDC3	100	97.297	ENSNBRG00000007881	EDC3	100	97.297	Neolamprologus_brichardi
ENSPNYG00000009669	EDC3	99	50.682	ENSNLEG00000014577	EDC3	99	50.682	Nomascus_leucogenys
ENSPNYG00000009669	EDC3	99	58.627	ENSMEUG00000009077	EDC3	99	58.627	Notamacropus_eugenii
ENSPNYG00000009669	EDC3	86	75.926	ENSOPRG00000009540	-	78	75.926	Ochotona_princeps
ENSPNYG00000009669	EDC3	100	65.975	ENSONIG00000008434	edc3	100	65.975	Oreochromis_niloticus
ENSPNYG00000009669	EDC3	100	88.521	ENSONIG00000002932	-	100	88.521	Oreochromis_niloticus
ENSPNYG00000009669	EDC3	76	54.613	ENSOCUG00000017740	EDC3	86	54.613	Oryctolagus_cuniculus
ENSPNYG00000009669	EDC3	100	64.256	ENSORLG00000004883	edc3	100	64.256	Oryzias_latipes
ENSPNYG00000009669	EDC3	99	75.424	ENSORLG00000014399	-	98	75.424	Oryzias_latipes
ENSPNYG00000009669	EDC3	100	64.182	ENSORLG00020012262	edc3	100	64.182	Oryzias_latipes_hni
ENSPNYG00000009669	EDC3	99	75.424	ENSORLG00020019446	-	99	75.424	Oryzias_latipes_hni
ENSPNYG00000009669	EDC3	100	64.182	ENSORLG00015005634	edc3	100	64.182	Oryzias_latipes_hsok
ENSPNYG00000009669	EDC3	99	75.424	ENSORLG00015017635	-	95	75.424	Oryzias_latipes_hsok
ENSPNYG00000009669	EDC3	99	75.899	ENSOMEG00000017354	EDC3	99	75.899	Oryzias_melastigma
ENSPNYG00000009669	EDC3	100	64.938	ENSOMEG00000014026	edc3	100	64.938	Oryzias_melastigma
ENSPNYG00000009669	EDC3	99	59.064	ENSOGAG00000014441	EDC3	100	58.869	Otolemur_garnettii
ENSPNYG00000009669	EDC3	99	58.285	ENSOARG00000003476	EDC3	99	58.755	Ovis_aries
ENSPNYG00000009669	EDC3	99	58.090	ENSPPAG00000040143	EDC3	99	58.090	Pan_paniscus
ENSPNYG00000009669	EDC3	99	58.090	ENSPPRG00000006257	EDC3	99	58.090	Panthera_pardus
ENSPNYG00000009669	EDC3	99	58.090	ENSPTIG00000017424	EDC3	99	58.090	Panthera_tigris_altaica
ENSPNYG00000009669	EDC3	99	58.090	ENSPTRG00000007279	EDC3	99	58.090	Pan_troglodytes
ENSPNYG00000009669	EDC3	99	58.285	ENSPANG00000015997	EDC3	99	58.285	Papio_anubis
ENSPNYG00000009669	EDC3	99	62.648	ENSPKIG00000004416	edc3	99	62.648	Paramormyrops_kingsleyae
ENSPNYG00000009669	EDC3	99	62.475	ENSPKIG00000019810	EDC3	99	62.800	Paramormyrops_kingsleyae
ENSPNYG00000009669	EDC3	99	54.581	ENSPSIG00000008474	EDC3	99	55.556	Pelodiscus_sinensis
ENSPNYG00000009669	EDC3	100	64.583	ENSPMGG00000007223	edc3	100	64.583	Periophthalmus_magnuspinnatus
ENSPNYG00000009669	EDC3	99	58.594	ENSPEMG00000015260	Edc3	99	58.594	Peromyscus_maniculatus_bairdii
ENSPNYG00000009669	EDC3	99	57.647	ENSPCIG00000006276	EDC3	70	58.431	Phascolarctos_cinereus
ENSPNYG00000009669	EDC3	100	65.353	ENSPFOG00000012204	edc3	100	65.353	Poecilia_formosa
ENSPNYG00000009669	EDC3	100	65.353	ENSPLAG00000014420	edc3	100	65.353	Poecilia_latipinna
ENSPNYG00000009669	EDC3	100	65.353	ENSPMEG00000023289	edc3	100	65.353	Poecilia_mexicana
ENSPNYG00000009669	EDC3	100	65.145	ENSPREG00000016022	edc3	100	65.145	Poecilia_reticulata
ENSPNYG00000009669	EDC3	100	57.004	ENSPPYG00000006642	EDC3	99	57.115	Pongo_abelii
ENSPNYG00000009669	EDC3	90	77.778	ENSPCAG00000002802	EDC3	82	77.778	Procavia_capensis
ENSPNYG00000009669	EDC3	99	58.674	ENSPCOG00000013364	EDC3	99	58.674	Propithecus_coquereli
ENSPNYG00000009669	EDC3	99	58.285	ENSPVAG00000014733	EDC3	99	58.285	Pteropus_vampyrus
ENSPNYG00000009669	EDC3	100	62.672	ENSPNAG00000019657	edc3	100	62.672	Pygocentrus_nattereri
ENSPNYG00000009669	EDC3	99	58.039	ENSRNOG00000019579	Edc3	99	57.647	Rattus_norvegicus
ENSPNYG00000009669	EDC3	99	58.285	ENSRBIG00000019488	EDC3	99	58.285	Rhinopithecus_bieti
ENSPNYG00000009669	EDC3	99	58.285	ENSRROG00000034959	EDC3	99	58.285	Rhinopithecus_roxellana
ENSPNYG00000009669	EDC3	99	58.674	ENSSBOG00000004896	EDC3	99	58.674	Saimiri_boliviensis_boliviensis
ENSPNYG00000009669	EDC3	96	56.301	ENSSHAG00000015075	EDC3	95	56.707	Sarcophilus_harrisii
ENSPNYG00000009669	EDC3	99	65.269	ENSSFOG00015016939	edc3	99	64.870	Scleropages_formosus
ENSPNYG00000009669	EDC3	99	68.590	ENSSFOG00015002439	edc3	100	68.443	Scleropages_formosus
ENSPNYG00000009669	EDC3	99	75.584	ENSSMAG00000010176	-	99	75.584	Scophthalmus_maximus
ENSPNYG00000009669	EDC3	99	66.112	ENSSMAG00000010695	edc3	99	66.112	Scophthalmus_maximus
ENSPNYG00000009669	EDC3	100	66.390	ENSSDUG00000021844	edc3	99	66.528	Seriola_dumerili
ENSPNYG00000009669	EDC3	99	80.255	ENSSDUG00000007671	EDC3	99	80.255	Seriola_dumerili
ENSPNYG00000009669	EDC3	100	66.390	ENSSLDG00000022046	edc3	100	66.390	Seriola_lalandi_dorsalis
ENSPNYG00000009669	EDC3	82	75.304	ENSSARG00000003907	EDC3	73	75.304	Sorex_araneus
ENSPNYG00000009669	EDC3	99	58.789	ENSSPUG00000008232	EDC3	99	58.789	Sphenodon_punctatus
ENSPNYG00000009669	EDC3	99	80.591	ENSSPAG00000020327	EDC3	99	80.591	Stegastes_partitus
ENSPNYG00000009669	EDC3	100	66.183	ENSSPAG00000010009	edc3	100	66.183	Stegastes_partitus
ENSPNYG00000009669	EDC3	99	63.136	ENSSSCG00000001903	EDC3	99	63.136	Sus_scrofa
ENSPNYG00000009669	EDC3	99	60.196	ENSTGUG00000004007	EDC3	99	60.196	Taeniopygia_guttata
ENSPNYG00000009669	EDC3	100	66.875	ENSTRUG00000017078	edc3	100	66.875	Takifugu_rubripes
ENSPNYG00000009669	EDC3	100	66.529	ENSTNIG00000016047	edc3	100	66.529	Tetraodon_nigroviridis
ENSPNYG00000009669	EDC3	99	58.008	ENSTTRG00000007990	EDC3	99	58.008	Tursiops_truncatus
ENSPNYG00000009669	EDC3	100	57.782	ENSUAMG00000026710	-	100	57.782	Ursus_americanus
ENSPNYG00000009669	EDC3	100	57.782	ENSUMAG00000005006	EDC3	96	57.782	Ursus_maritimus
ENSPNYG00000009669	EDC3	86	70.370	ENSVPAG00000003499	-	78	70.370	Vicugna_pacos
ENSPNYG00000009669	EDC3	100	57.977	ENSVVUG00000018601	EDC3	100	57.977	Vulpes_vulpes
ENSPNYG00000009669	EDC3	75	65.625	ENSXETG00000010622	edc3	100	65.000	Xenopus_tropicalis
ENSPNYG00000009669	EDC3	100	65.217	ENSXMAG00000007377	edc3	100	65.217	Xiphophorus_maculatus