EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPNYG00000010087 (Gene tree)
Gene ID: -
Gene Symbol: smarcad1a
Alias: smarcad1|wu:fi25c01|zgc:113183
Full Name: SWI/SNF-related%2C matrix-associated actin-dependent regulator of chromatin%2C subfamily a%2C containing DEAD/H box 1
Gene Type: protein_coding
Species: Pundamilia_nyererei
Status: putative
Strand: Minus strand
Length: 7269 bases
Position: chrJH419211.1:838681-845949
Accession: 102196957
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPNYP00000013356	ResIII	PF04851.15	2.2e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPNYT00000013684	-	2472	XM_005722010	ENSPNYP00000013356	823 (aa)	XP_005722067	-

Gene Model

Click here to download ENSPNYG00000010087's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPNYG00000010087's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPNYG00000010087	smarcad1a	51	33.879	ENSPNYG00000021398	-	82	33.760
ENSPNYG00000010087	smarcad1a	63	34.767	ENSPNYG00000009100	hells	67	35.125
ENSPNYG00000010087	smarcad1a	60	31.870	ENSPNYG00000018303	rad54b	56	31.781
ENSPNYG00000010087	smarcad1a	61	37.305	ENSPNYG00000013001	chd1l	50	37.305

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPNYG00000010087	smarcad1a	86	60.948	ENSG00000163104	SMARCAD1	97	67.128	Homo_sapiens
ENSPNYG00000010087	smarcad1a	97	81.472	ENSAPOG00000011446	smarcad1a	77	80.807	Acanthochromis_polyacanthus
ENSPNYG00000010087	smarcad1a	85	60.815	ENSAMEG00000005844	SMARCAD1	67	62.029	Ailuropoda_melanoleuca
ENSPNYG00000010087	smarcad1a	85	88.319	ENSACIG00000018326	smarcad1a	95	91.111	Amphilophus_citrinellus
ENSPNYG00000010087	smarcad1a	97	81.618	ENSAOCG00000019762	smarcad1a	77	81.663	Amphiprion_ocellaris
ENSPNYG00000010087	smarcad1a	97	81.863	ENSAPEG00000003889	smarcad1a	77	81.907	Amphiprion_percula
ENSPNYG00000010087	smarcad1a	96	81.011	ENSATEG00000015608	smarcad1a	80	81.751	Anabas_testudineus
ENSPNYG00000010087	smarcad1a	74	67.040	ENSAPLG00000004630	SMARCAD1	72	62.554	Anas_platyrhynchos
ENSPNYG00000010087	smarcad1a	74	65.760	ENSACAG00000013554	SMARCAD1	65	62.519	Anolis_carolinensis
ENSPNYG00000010087	smarcad1a	86	60.809	ENSANAG00000020488	SMARCAD1	76	62.009	Aotus_nancymaae
ENSPNYG00000010087	smarcad1a	97	97.764	ENSACLG00000017063	smarcad1a	76	97.764	Astatotilapia_calliptera
ENSPNYG00000010087	smarcad1a	81	70.864	ENSAMXG00000019130	smarcad1b	73	71.091	Astyanax_mexicanus
ENSPNYG00000010087	smarcad1a	83	68.006	ENSAMXG00000015470	smarcad1a	97	68.052	Astyanax_mexicanus
ENSPNYG00000010087	smarcad1a	85	60.504	ENSBTAG00000017061	SMARCAD1	67	61.705	Bos_taurus
ENSPNYG00000010087	smarcad1a	75	41.956	WBGene00010845	M03C11.8	67	41.220	Caenorhabditis_elegans
ENSPNYG00000010087	smarcad1a	86	60.948	ENSCJAG00000006778	SMARCAD1	67	62.154	Callithrix_jacchus
ENSPNYG00000010087	smarcad1a	85	60.815	ENSCAFG00000010026	SMARCAD1	67	62.029	Canis_familiaris
ENSPNYG00000010087	smarcad1a	85	60.815	ENSCAFG00020003994	SMARCAD1	77	62.029	Canis_lupus_dingo
ENSPNYG00000010087	smarcad1a	86	60.669	ENSCHIG00000012905	SMARCAD1	67	62.009	Capra_hircus
ENSPNYG00000010087	smarcad1a	85	60.955	ENSTSYG00000002706	SMARCAD1	66	62.832	Carlito_syrichta
ENSPNYG00000010087	smarcad1a	86	54.278	ENSCAPG00000016744	SMARCAD1	74	56.119	Cavia_aperea
ENSPNYG00000010087	smarcad1a	85	60.674	ENSCPOG00000011398	SMARCAD1	66	62.537	Cavia_porcellus
ENSPNYG00000010087	smarcad1a	86	60.948	ENSCCAG00000022264	SMARCAD1	97	67.128	Cebus_capucinus
ENSPNYG00000010087	smarcad1a	86	60.948	ENSCATG00000035663	SMARCAD1	77	62.154	Cercocebus_atys
ENSPNYG00000010087	smarcad1a	86	60.948	ENSCSAG00000004186	SMARCAD1	82	62.154	Chlorocebus_sabaeus
ENSPNYG00000010087	smarcad1a	89	59.893	ENSCPBG00000013203	SMARCAD1	66	63.173	Chrysemys_picta_bellii
ENSPNYG00000010087	smarcad1a	75	49.137	ENSCING00000001688	-	96	48.916	Ciona_intestinalis
ENSPNYG00000010087	smarcad1a	86	60.948	ENSCANG00000003556	SMARCAD1	97	67.128	Colobus_angolensis_palliatus
ENSPNYG00000010087	smarcad1a	84	60.028	ENSCGRG00001015056	Smarcad1	61	65.865	Cricetulus_griseus_chok1gshd
ENSPNYG00000010087	smarcad1a	84	60.028	ENSCGRG00000014087	Smarcad1	61	65.865	Cricetulus_griseus_crigri
ENSPNYG00000010087	smarcad1a	98	73.447	ENSCSEG00000014419	-	78	74.525	Cynoglossus_semilaevis
ENSPNYG00000010087	smarcad1a	97	74.939	ENSCSEG00000017903	smarcad1a	73	76.081	Cynoglossus_semilaevis
ENSPNYG00000010087	smarcad1a	76	74.921	ENSDARG00000073721	smarcad1b	71	72.059	Danio_rerio
ENSPNYG00000010087	smarcad1a	85	70.255	ENSDARG00000014041	smarcad1a	70	71.072	Danio_rerio
ENSPNYG00000010087	smarcad1a	86	60.809	ENSDNOG00000000806	-	66	62.832	Dasypus_novemcinctus
ENSPNYG00000010087	smarcad1a	83	61.795	ENSDORG00000012331	Smarcad1	67	61.884	Dipodomys_ordii
ENSPNYG00000010087	smarcad1a	76	44.704	FBgn0032157	Etl1	76	44.648	Drosophila_melanogaster
ENSPNYG00000010087	smarcad1a	75	48.746	ENSEBUG00000003969	smarcad1a	98	48.265	Eptatretus_burgeri
ENSPNYG00000010087	smarcad1a	85	60.815	ENSEASG00005012382	SMARCAD1	79	60.169	Equus_asinus_asinus
ENSPNYG00000010087	smarcad1a	85	60.815	ENSECAG00000011562	SMARCAD1	67	62.029	Equus_caballus
ENSPNYG00000010087	smarcad1a	86	76.356	ENSELUG00000018535	smarcad1a	67	79.179	Esox_lucius
ENSPNYG00000010087	smarcad1a	81	69.985	ENSELUG00000019154	smarcad1b	68	69.985	Esox_lucius
ENSPNYG00000010087	smarcad1a	86	60.809	ENSFCAG00000003958	SMARCAD1	97	67.128	Felis_catus
ENSPNYG00000010087	smarcad1a	84	62.605	ENSFALG00000006089	SMARCAD1	65	65.663	Ficedula_albicollis
ENSPNYG00000010087	smarcad1a	78	64.122	ENSFDAG00000017027	SMARCAD1	64	64.122	Fukomys_damarensis
ENSPNYG00000010087	smarcad1a	85	78.925	ENSFHEG00000012778	smarcad1a	64	79.913	Fundulus_heteroclitus
ENSPNYG00000010087	smarcad1a	85	78.401	ENSGMOG00000018995	smarcad1a	80	80.318	Gadus_morhua
ENSPNYG00000010087	smarcad1a	89	59.363	ENSGALG00000037339	SMARCAD1	81	63.353	Gallus_gallus
ENSPNYG00000010087	smarcad1a	97	71.499	ENSGAFG00000013498	smarcad1a	62	78.035	Gambusia_affinis
ENSPNYG00000010087	smarcad1a	83	83.501	ENSGACG00000007327	smarcad1a	78	84.627	Gasterosteus_aculeatus
ENSPNYG00000010087	smarcad1a	88	60.651	ENSGAGG00000008582	SMARCAD1	65	63.905	Gopherus_agassizii
ENSPNYG00000010087	smarcad1a	86	60.948	ENSGGOG00000023001	SMARCAD1	67	62.154	Gorilla_gorilla
ENSPNYG00000010087	smarcad1a	97	98.137	ENSHBUG00000011042	smarcad1a	76	98.137	Haplochromis_burtoni
ENSPNYG00000010087	smarcad1a	78	64.122	ENSHGLG00000005070	SMARCAD1	64	64.122	Heterocephalus_glaber_female
ENSPNYG00000010087	smarcad1a	78	64.122	ENSHGLG00100006812	SMARCAD1	64	64.122	Heterocephalus_glaber_male
ENSPNYG00000010087	smarcad1a	91	72.523	ENSHCOG00000007848	smarcad1a	68	72.919	Hippocampus_comes
ENSPNYG00000010087	smarcad1a	82	69.297	ENSIPUG00000000242	smarcad1a	69	70.667	Ictalurus_punctatus
ENSPNYG00000010087	smarcad1a	77	72.473	ENSIPUG00000022817	smarcad1b	73	69.630	Ictalurus_punctatus
ENSPNYG00000010087	smarcad1a	74	65.865	ENSSTOG00000001227	SMARCAD1	61	65.865	Ictidomys_tridecemlineatus
ENSPNYG00000010087	smarcad1a	87	59.041	ENSJJAG00000022342	Smarcad1	61	65.865	Jaculus_jaculus
ENSPNYG00000010087	smarcad1a	91	75.796	ENSKMAG00000021351	smarcad1a	72	79.238	Kryptolebias_marmoratus
ENSPNYG00000010087	smarcad1a	88	82.740	ENSLBEG00000008088	smarcad1a	75	78.807	Labrus_bergylta
ENSPNYG00000010087	smarcad1a	78	72.853	ENSLOCG00000012909	smarcad1a	70	70.563	Lepisosteus_oculatus
ENSPNYG00000010087	smarcad1a	81	61.357	ENSLAFG00000000040	SMARCAD1	66	61.357	Loxodonta_africana
ENSPNYG00000010087	smarcad1a	86	60.948	ENSMFAG00000042606	SMARCAD1	77	62.154	Macaca_fascicularis
ENSPNYG00000010087	smarcad1a	86	60.948	ENSMMUG00000022242	SMARCAD1	77	62.154	Macaca_mulatta
ENSPNYG00000010087	smarcad1a	86	60.948	ENSMNEG00000038117	SMARCAD1	97	67.128	Macaca_nemestrina
ENSPNYG00000010087	smarcad1a	86	60.948	ENSMLEG00000038333	SMARCAD1	97	67.128	Mandrillus_leucophaeus
ENSPNYG00000010087	smarcad1a	92	82.965	ENSMAMG00000000933	smarcad1a	76	80.297	Mastacembelus_armatus
ENSPNYG00000010087	smarcad1a	97	93.665	ENSMZEG00005005203	smarcad1a	76	93.665	Maylandia_zebra
ENSPNYG00000010087	smarcad1a	69	67.708	ENSMGAG00000005577	SMARCAD1	60	67.708	Meleagris_gallopavo
ENSPNYG00000010087	smarcad1a	87	59.203	ENSMAUG00000008417	Smarcad1	67	61.628	Mesocricetus_auratus
ENSPNYG00000010087	smarcad1a	85	60.644	ENSMICG00000009746	SMARCAD1	61	65.974	Microcebus_murinus
ENSPNYG00000010087	smarcad1a	85	60.168	ENSMOCG00000017142	Smarcad1	61	66.186	Microtus_ochrogaster
ENSPNYG00000010087	smarcad1a	82	86.735	ENSMMOG00000000275	smarcad1a	91	85.868	Mola_mola
ENSPNYG00000010087	smarcad1a	93	55.748	ENSMODG00000019268	SMARCAD1	61	66.987	Monodelphis_domestica
ENSPNYG00000010087	smarcad1a	85	60.000	MGP_CAROLIEiJ_G0028458	-	50	65.865	Mus_caroli
ENSPNYG00000010087	smarcad1a	85	60.000	ENSMUSG00000029920	Smarcad1	61	65.865	Mus_musculus
ENSPNYG00000010087	smarcad1a	85	60.000	MGP_PahariEiJ_G0022198	Smarcad1	61	65.865	Mus_pahari
ENSPNYG00000010087	smarcad1a	85	60.000	MGP_SPRETEiJ_G0029462	Smarcad1	61	65.865	Mus_spretus
ENSPNYG00000010087	smarcad1a	85	60.815	ENSMPUG00000002111	SMARCAD1	67	62.029	Mustela_putorius_furo
ENSPNYG00000010087	smarcad1a	85	60.196	ENSMLUG00000000425	SMARCAD1	61	65.815	Myotis_lucifugus
ENSPNYG00000010087	smarcad1a	85	60.253	ENSNGAG00000000810	Smarcad1	62	65.705	Nannospalax_galili
ENSPNYG00000010087	smarcad1a	100	96.048	ENSNBRG00000012749	smarcad1a	100	96.048	Neolamprologus_brichardi
ENSPNYG00000010087	smarcad1a	86	60.948	ENSNLEG00000014225	SMARCAD1	97	67.128	Nomascus_leucogenys
ENSPNYG00000010087	smarcad1a	85	60.589	ENSODEG00000004334	SMARCAD1	66	62.445	Octodon_degus
ENSPNYG00000010087	smarcad1a	75	94.620	ENSONIG00000015059	smarcad1a	75	89.721	Oreochromis_niloticus
ENSPNYG00000010087	smarcad1a	74	67.891	ENSOANG00000013764	SMARCAD1	81	64.402	Ornithorhynchus_anatinus
ENSPNYG00000010087	smarcad1a	82	61.863	ENSOCUG00000017283	SMARCAD1	67	61.863	Oryctolagus_cuniculus
ENSPNYG00000010087	smarcad1a	92	77.516	ENSORLG00000004869	smarcad1a	72	76.671	Oryzias_latipes
ENSPNYG00000010087	smarcad1a	92	77.516	ENSORLG00020020569	smarcad1a	72	76.540	Oryzias_latipes_hni
ENSPNYG00000010087	smarcad1a	92	77.516	ENSORLG00015009045	smarcad1a	72	76.671	Oryzias_latipes_hsok
ENSPNYG00000010087	smarcad1a	97	74.413	ENSOMEG00000023032	smarcad1a	73	77.154	Oryzias_melastigma
ENSPNYG00000010087	smarcad1a	85	60.364	ENSOGAG00000011444	SMARCAD1	61	65.815	Otolemur_garnettii
ENSPNYG00000010087	smarcad1a	86	60.669	ENSOARG00000017851	SMARCAD1	67	62.009	Ovis_aries
ENSPNYG00000010087	smarcad1a	86	60.948	ENSPPAG00000035715	SMARCAD1	67	62.154	Pan_paniscus
ENSPNYG00000010087	smarcad1a	86	60.809	ENSPPRG00000024756	SMARCAD1	97	67.128	Panthera_pardus
ENSPNYG00000010087	smarcad1a	86	60.640	ENSPTIG00000017868	SMARCAD1	66	62.647	Panthera_tigris_altaica
ENSPNYG00000010087	smarcad1a	86	60.948	ENSPTRG00000023126	SMARCAD1	97	67.128	Pan_troglodytes
ENSPNYG00000010087	smarcad1a	86	59.583	ENSPANG00000019757	SMARCAD1	66	62.009	Papio_anubis
ENSPNYG00000010087	smarcad1a	88	60.787	ENSPSIG00000010255	SMARCAD1	65	64.201	Pelodiscus_sinensis
ENSPNYG00000010087	smarcad1a	75	77.671	ENSPMGG00000010735	smarcad1a	94	76.090	Periophthalmus_magnuspinnatus
ENSPNYG00000010087	smarcad1a	85	52.750	ENSPEMG00000001854	Smarcad1	68	54.136	Peromyscus_maniculatus_bairdii
ENSPNYG00000010087	smarcad1a	79	57.481	ENSPMAG00000003516	smarcad1a	66	57.481	Petromyzon_marinus
ENSPNYG00000010087	smarcad1a	89	60.107	ENSPCIG00000008137	SMARCAD1	86	66.719	Phascolarctos_cinereus
ENSPNYG00000010087	smarcad1a	97	74.755	ENSPFOG00000019116	smarcad1a	63	81.936	Poecilia_formosa
ENSPNYG00000010087	smarcad1a	97	74.632	ENSPLAG00000000108	smarcad1a	63	81.792	Poecilia_latipinna
ENSPNYG00000010087	smarcad1a	97	74.755	ENSPMEG00000009155	smarcad1a	63	81.936	Poecilia_mexicana
ENSPNYG00000010087	smarcad1a	97	74.693	ENSPREG00000018185	smarcad1a	70	82.081	Poecilia_reticulata
ENSPNYG00000010087	smarcad1a	86	60.501	ENSPPYG00000014935	SMARCAD1	67	61.684	Pongo_abelii
ENSPNYG00000010087	smarcad1a	73	57.724	ENSPCOG00000020478	SMARCAD1	62	63.878	Propithecus_coquereli
ENSPNYG00000010087	smarcad1a	86	59.916	ENSPVAG00000001760	SMARCAD1	67	61.224	Pteropus_vampyrus
ENSPNYG00000010087	smarcad1a	80	72.156	ENSPNAG00000010099	smarcad1b	71	72.496	Pygocentrus_nattereri
ENSPNYG00000010087	smarcad1a	92	65.752	ENSPNAG00000001663	smarcad1a	68	70.692	Pygocentrus_nattereri
ENSPNYG00000010087	smarcad1a	74	66.186	ENSRNOG00000006391	Smarcad1	61	66.186	Rattus_norvegicus
ENSPNYG00000010087	smarcad1a	86	60.948	ENSRBIG00000041989	SMARCAD1	67	62.154	Rhinopithecus_bieti
ENSPNYG00000010087	smarcad1a	86	60.948	ENSRROG00000035309	SMARCAD1	67	62.154	Rhinopithecus_roxellana
ENSPNYG00000010087	smarcad1a	86	60.948	ENSSBOG00000032114	SMARCAD1	97	67.128	Saimiri_boliviensis_boliviensis
ENSPNYG00000010087	smarcad1a	93	56.134	ENSSHAG00000001279	SMARCAD1	78	56.350	Sarcophilus_harrisii
ENSPNYG00000010087	smarcad1a	82	69.928	ENSSFOG00015020909	smarcad1a	92	69.928	Scleropages_formosus
ENSPNYG00000010087	smarcad1a	89	68.016	ENSSFOG00015016814	smarcad1b	66	73.778	Scleropages_formosus
ENSPNYG00000010087	smarcad1a	97	80.877	ENSSMAG00000001326	smarcad1a	76	80.390	Scophthalmus_maximus
ENSPNYG00000010087	smarcad1a	98	80.241	ENSSDUG00000022338	smarcad1a	99	81.633	Seriola_dumerili
ENSPNYG00000010087	smarcad1a	97	80.736	ENSSLDG00000024986	smarcad1a	76	81.840	Seriola_lalandi_dorsalis
ENSPNYG00000010087	smarcad1a	69	69.097	ENSSPUG00000004633	SMARCAD1	96	69.097	Sphenodon_punctatus
ENSPNYG00000010087	smarcad1a	97	81.127	ENSSPAG00000001970	smarcad1a	77	80.708	Stegastes_partitus
ENSPNYG00000010087	smarcad1a	85	60.815	ENSSSCG00000009193	SMARCAD1	82	62.029	Sus_scrofa
ENSPNYG00000010087	smarcad1a	84	61.259	ENSTGUG00000003127	SMARCAD1	88	63.348	Taeniopygia_guttata
ENSPNYG00000010087	smarcad1a	85	83.097	ENSTNIG00000017585	smarcad1a	78	85.294	Tetraodon_nigroviridis
ENSPNYG00000010087	smarcad1a	70	69.610	ENSTBEG00000002789	SMARCAD1	57	69.610	Tupaia_belangeri
ENSPNYG00000010087	smarcad1a	86	60.306	ENSTTRG00000000226	SMARCAD1	69	61.650	Tursiops_truncatus
ENSPNYG00000010087	smarcad1a	85	60.900	ENSUAMG00000022262	SMARCAD1	74	62.119	Ursus_americanus
ENSPNYG00000010087	smarcad1a	85	60.815	ENSUMAG00000004549	SMARCAD1	67	62.029	Ursus_maritimus
ENSPNYG00000010087	smarcad1a	85	60.900	ENSVVUG00000007271	SMARCAD1	84	61.616	Vulpes_vulpes
ENSPNYG00000010087	smarcad1a	85	56.276	ENSXETG00000019214	smarcad1	76	58.346	Xenopus_tropicalis
ENSPNYG00000010087	smarcad1a	98	70.517	ENSXCOG00000005232	smarcad1a	85	80.758	Xiphophorus_couchianus
ENSPNYG00000010087	smarcad1a	96	75.652	ENSXMAG00000015350	smarcad1a	63	81.503	Xiphophorus_maculatus