EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPNYG00000010217 (Gene tree)
Gene ID: 102214810
Gene Symbol: tsen54
Alias: zgc:109927
Full Name: tRNA splicing endonuclease subunit 54
Gene Type: protein_coding
Species: Pundamilia_nyererei
Status: putative
Strand: Plus strand
Length: 4766 bases
Position: chrJH419300.1:562639-567404
Accession: 102214810
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPNYP00000013544	tRNA_int_end_N2	PF12928.7	2.8e-19	1	1
ENSPNYP00000013563	tRNA_int_end_N2	PF12928.7	9.3e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPNYT00000013896	-	1191	-	ENSPNYP00000013563	396 (aa)	-	-
ENSPNYT00000013875	-	1455	XM_005739927	ENSPNYP00000013544	484 (aa)	XP_005739984	-

Gene Model

Click here to download ENSPNYG00000010217's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPNYG00000010217's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPNYG00000010217	tsen54	99	44.289	ENSG00000182173	TSEN54	100	66.667	Homo_sapiens
ENSPNYG00000010217	tsen54	100	76.939	ENSAPOG00000009659	tsen54	100	75.708	Acanthochromis_polyacanthus
ENSPNYG00000010217	tsen54	99	41.014	ENSAMEG00000009414	TSEN54	92	45.000	Ailuropoda_melanoleuca
ENSPNYG00000010217	tsen54	100	78.367	ENSAOCG00000000152	tsen54	92	78.367	Amphiprion_ocellaris
ENSPNYG00000010217	tsen54	100	77.347	ENSAPEG00000018931	tsen54	91	77.959	Amphiprion_percula
ENSPNYG00000010217	tsen54	100	74.349	ENSATEG00000019860	tsen54	94	74.349	Anabas_testudineus
ENSPNYG00000010217	tsen54	99	41.995	ENSAPLG00000009419	TSEN54	99	45.905	Anas_platyrhynchos
ENSPNYG00000010217	tsen54	99	46.032	ENSACAG00000006714	TSEN54	94	44.902	Anolis_carolinensis
ENSPNYG00000010217	tsen54	99	44.289	ENSANAG00000024061	TSEN54	92	45.328	Aotus_nancymaae
ENSPNYG00000010217	tsen54	100	97.526	ENSACLG00000019800	tsen54	94	97.526	Astatotilapia_calliptera
ENSPNYG00000010217	tsen54	99	56.592	ENSAMXG00000006546	tsen54	93	57.026	Astyanax_mexicanus
ENSPNYG00000010217	tsen54	99	43.590	ENSBTAG00000000824	TSEN54	92	44.242	Bos_taurus
ENSPNYG00000010217	tsen54	99	43.687	ENSCJAG00000014278	TSEN54	92	44.732	Callithrix_jacchus
ENSPNYG00000010217	tsen54	99	44.177	ENSCAFG00000004798	TSEN54	92	44.422	Canis_familiaris
ENSPNYG00000010217	tsen54	99	44.177	ENSCAFG00020000312	TSEN54	92	44.422	Canis_lupus_dingo
ENSPNYG00000010217	tsen54	99	43.651	ENSCHIG00000019908	TSEN54	92	43.651	Capra_hircus
ENSPNYG00000010217	tsen54	99	41.839	ENSTSYG00000037439	TSEN54	99	44.397	Carlito_syrichta
ENSPNYG00000010217	tsen54	99	45.020	ENSCCAG00000036624	TSEN54	92	44.930	Cebus_capucinus
ENSPNYG00000010217	tsen54	99	45.161	ENSCATG00000042877	TSEN54	92	46.627	Cercocebus_atys
ENSPNYG00000010217	tsen54	99	45.238	ENSCLAG00000002924	TSEN54	92	45.149	Chinchilla_lanigera
ENSPNYG00000010217	tsen54	99	45.363	ENSCSAG00000004809	TSEN54	92	46.825	Chlorocebus_sabaeus
ENSPNYG00000010217	tsen54	99	47.573	ENSCPBG00000028071	TSEN54	94	48.134	Chrysemys_picta_bellii
ENSPNYG00000010217	tsen54	99	45.363	ENSCANG00000028053	TSEN54	92	46.825	Colobus_angolensis_palliatus
ENSPNYG00000010217	tsen54	99	43.849	ENSCGRG00001020029	Tsen54	92	44.289	Cricetulus_griseus_chok1gshd
ENSPNYG00000010217	tsen54	99	40.920	ENSCGRG00000016289	Tsen54	99	42.702	Cricetulus_griseus_crigri
ENSPNYG00000010217	tsen54	99	54.177	ENSCSEG00000020586	tsen54	99	57.007	Cynoglossus_semilaevis
ENSPNYG00000010217	tsen54	99	55.825	ENSDARG00000036844	tsen54	100	55.961	Danio_rerio
ENSPNYG00000010217	tsen54	99	44.711	ENSDNOG00000018452	TSEN54	92	44.511	Dasypus_novemcinctus
ENSPNYG00000010217	tsen54	99	45.287	ENSDORG00000004073	Tsen54	92	45.287	Dipodomys_ordii
ENSPNYG00000010217	tsen54	99	30.785	ENSEBUG00000005203	TSEN54	91	31.176	Eptatretus_burgeri
ENSPNYG00000010217	tsen54	99	44.689	ENSEASG00005000579	TSEN54	92	44.689	Equus_asinus_asinus
ENSPNYG00000010217	tsen54	99	44.689	ENSECAG00000004924	TSEN54	92	44.689	Equus_caballus
ENSPNYG00000010217	tsen54	99	39.773	ENSEEUG00000008467	TSEN54	99	42.827	Erinaceus_europaeus
ENSPNYG00000010217	tsen54	99	58.614	ENSELUG00000017703	tsen54	87	58.039	Esox_lucius
ENSPNYG00000010217	tsen54	99	45.020	ENSFCAG00000023712	TSEN54	93	44.794	Felis_catus
ENSPNYG00000010217	tsen54	99	46.800	ENSFALG00000001119	TSEN54	92	46.185	Ficedula_albicollis
ENSPNYG00000010217	tsen54	99	41.972	ENSFDAG00000019090	TSEN54	99	43.656	Fukomys_damarensis
ENSPNYG00000010217	tsen54	100	71.020	ENSFHEG00000005470	tsen54	93	71.020	Fundulus_heteroclitus
ENSPNYG00000010217	tsen54	99	44.361	ENSGMOG00000013146	tsen54	95	54.494	Gadus_morhua
ENSPNYG00000010217	tsen54	99	44.071	ENSGALG00000047163	TSEN54	96	42.829	Gallus_gallus
ENSPNYG00000010217	tsen54	100	67.206	ENSGAFG00000005111	tsen54	93	67.206	Gambusia_affinis
ENSPNYG00000010217	tsen54	100	64.024	ENSGACG00000014987	tsen54	97	63.415	Gasterosteus_aculeatus
ENSPNYG00000010217	tsen54	99	48.538	ENSGAGG00000006825	TSEN54	92	48.532	Gopherus_agassizii
ENSPNYG00000010217	tsen54	99	44.489	ENSGGOG00000009417	TSEN54	96	46.825	Gorilla_gorilla
ENSPNYG00000010217	tsen54	90	97.011	ENSHBUG00000018296	tsen54	89	94.253	Haplochromis_burtoni
ENSPNYG00000010217	tsen54	99	46.123	ENSHGLG00000007979	TSEN54	92	45.618	Heterocephalus_glaber_female
ENSPNYG00000010217	tsen54	99	45.129	ENSHGLG00100005497	TSEN54	93	44.533	Heterocephalus_glaber_male
ENSPNYG00000010217	tsen54	100	61.165	ENSHCOG00000007481	tsen54	100	62.791	Hippocampus_comes
ENSPNYG00000010217	tsen54	99	51.606	ENSIPUG00000000590	tsen54	93	51.004	Ictalurus_punctatus
ENSPNYG00000010217	tsen54	99	45.000	ENSSTOG00000012883	TSEN54	93	44.910	Ictidomys_tridecemlineatus
ENSPNYG00000010217	tsen54	99	45.984	ENSJJAG00000007365	Tsen54	92	45.984	Jaculus_jaculus
ENSPNYG00000010217	tsen54	100	69.819	ENSKMAG00000006944	tsen54	94	69.819	Kryptolebias_marmoratus
ENSPNYG00000010217	tsen54	100	69.339	ENSLBEG00000004199	tsen54	94	69.138	Labrus_bergylta
ENSPNYG00000010217	tsen54	99	42.157	ENSLACG00000009497	TSEN54	96	41.535	Latimeria_chalumnae
ENSPNYG00000010217	tsen54	99	54.257	ENSLOCG00000011191	tsen54	93	53.711	Lepisosteus_oculatus
ENSPNYG00000010217	tsen54	99	45.051	ENSLAFG00000011655	TSEN54	92	45.473	Loxodonta_africana
ENSPNYG00000010217	tsen54	99	45.363	ENSMFAG00000000712	TSEN54	81	58.503	Macaca_fascicularis
ENSPNYG00000010217	tsen54	99	45.363	ENSMNEG00000029199	TSEN54	81	58.503	Macaca_nemestrina
ENSPNYG00000010217	tsen54	99	41.492	ENSMLEG00000044168	TSEN54	88	45.940	Mandrillus_leucophaeus
ENSPNYG00000010217	tsen54	100	73.642	ENSMAMG00000019773	tsen54	94	73.642	Mastacembelus_armatus
ENSPNYG00000010217	tsen54	100	97.113	ENSMZEG00005000884	tsen54	94	97.113	Maylandia_zebra
ENSPNYG00000010217	tsen54	99	43.825	ENSMGAG00000009556	TSEN54	92	44.422	Meleagris_gallopavo
ENSPNYG00000010217	tsen54	99	44.533	ENSMAUG00000016838	Tsen54	92	44.533	Mesocricetus_auratus
ENSPNYG00000010217	tsen54	99	45.979	ENSMICG00000044012	TSEN54	92	46.311	Microcebus_murinus
ENSPNYG00000010217	tsen54	99	45.219	ENSMOCG00000021585	Tsen54	92	44.890	Microtus_ochrogaster
ENSPNYG00000010217	tsen54	100	64.213	ENSMMOG00000020189	tsen54	96	66.053	Mola_mola
ENSPNYG00000010217	tsen54	99	42.718	ENSMODG00000007438	TSEN54	91	42.633	Monodelphis_domestica
ENSPNYG00000010217	tsen54	99	73.547	ENSMALG00000020573	tsen54	93	74.148	Monopterus_albus
ENSPNYG00000010217	tsen54	99	44.869	MGP_CAROLIEiJ_G0017417	Tsen54	92	44.869	Mus_caroli
ENSPNYG00000010217	tsen54	99	45.272	ENSMUSG00000020781	Tsen54	92	45.272	Mus_musculus
ENSPNYG00000010217	tsen54	99	46.169	MGP_PahariEiJ_G0018547	Tsen54	92	45.709	Mus_pahari
ENSPNYG00000010217	tsen54	99	44.578	MGP_SPRETEiJ_G0018262	Tsen54	92	44.869	Mus_spretus
ENSPNYG00000010217	tsen54	99	42.998	ENSMPUG00000013870	TSEN54	92	43.676	Mustela_putorius_furo
ENSPNYG00000010217	tsen54	98	43.542	ENSMLUG00000015298	TSEN54	93	44.283	Myotis_lucifugus
ENSPNYG00000010217	tsen54	99	45.110	ENSNGAG00000015673	Tsen54	92	44.711	Nannospalax_galili
ENSPNYG00000010217	tsen54	99	37.615	ENSMEUG00000011908	TSEN54	99	41.632	Notamacropus_eugenii
ENSPNYG00000010217	tsen54	99	43.149	ENSOPRG00000012513	TSEN54	92	42.387	Ochotona_princeps
ENSPNYG00000010217	tsen54	100	93.827	ENSONIG00000009543	tsen54	94	93.827	Oreochromis_niloticus
ENSPNYG00000010217	tsen54	99	41.584	ENSOCUG00000009875	TSEN54	92	42.084	Oryctolagus_cuniculus
ENSPNYG00000010217	tsen54	100	64.344	ENSORLG00000000852	tsen54	94	64.403	Oryzias_latipes
ENSPNYG00000010217	tsen54	100	64.754	ENSORLG00020018221	tsen54	96	63.087	Oryzias_latipes_hni
ENSPNYG00000010217	tsen54	100	64.549	ENSORLG00015009413	tsen54	94	64.609	Oryzias_latipes_hsok
ENSPNYG00000010217	tsen54	100	65.432	ENSOMEG00000014402	tsen54	91	65.432	Oryzias_melastigma
ENSPNYG00000010217	tsen54	99	43.936	ENSOGAG00000001442	TSEN54	92	44.000	Otolemur_garnettii
ENSPNYG00000010217	tsen54	99	38.926	ENSOARG00000010361	TSEN54	99	42.266	Ovis_aries
ENSPNYG00000010217	tsen54	99	45.382	ENSPPAG00000043519	TSEN54	98	46.215	Pan_paniscus
ENSPNYG00000010217	tsen54	99	45.219	ENSPPRG00000009162	TSEN54	93	44.990	Panthera_pardus
ENSPNYG00000010217	tsen54	99	41.935	ENSPTIG00000019312	TSEN54	96	44.946	Panthera_tigris_altaica
ENSPNYG00000010217	tsen54	99	44.489	ENSPTRG00000009646	TSEN54	81	58.503	Pan_troglodytes
ENSPNYG00000010217	tsen54	99	44.835	ENSPANG00000020133	TSEN54	92	46.825	Papio_anubis
ENSPNYG00000010217	tsen54	99	52.207	ENSPKIG00000023018	tsen54	99	52.817	Paramormyrops_kingsleyae
ENSPNYG00000010217	tsen54	99	43.607	ENSPSIG00000012807	TSEN54	100	44.521	Pelodiscus_sinensis
ENSPNYG00000010217	tsen54	99	48.361	ENSPMGG00000019578	tsen54	100	48.361	Periophthalmus_magnuspinnatus
ENSPNYG00000010217	tsen54	99	44.600	ENSPEMG00000014857	Tsen54	92	44.890	Peromyscus_maniculatus_bairdii
ENSPNYG00000010217	tsen54	100	68.273	ENSPFOG00000022740	tsen54	93	68.273	Poecilia_formosa
ENSPNYG00000010217	tsen54	100	68.421	ENSPLAG00000014847	tsen54	93	68.421	Poecilia_latipinna
ENSPNYG00000010217	tsen54	100	68.219	ENSPMEG00000022876	tsen54	93	68.219	Poecilia_mexicana
ENSPNYG00000010217	tsen54	100	68.016	ENSPREG00000013090	tsen54	93	68.016	Poecilia_reticulata
ENSPNYG00000010217	tsen54	99	44.198	ENSPPYG00000008629	TSEN54	99	46.570	Pongo_abelii
ENSPNYG00000010217	tsen54	94	41.164	ENSPCAG00000002093	TSEN54	92	41.164	Procavia_capensis
ENSPNYG00000010217	tsen54	99	43.775	ENSPCOG00000027880	TSEN54	93	43.912	Propithecus_coquereli
ENSPNYG00000010217	tsen54	99	44.422	ENSPVAG00000008446	TSEN54	92	44.910	Pteropus_vampyrus
ENSPNYG00000010217	tsen54	99	55.200	ENSPNAG00000003770	tsen54	93	55.221	Pygocentrus_nattereri
ENSPNYG00000010217	tsen54	99	45.400	ENSRNOG00000004598	Tsen54	92	45.400	Rattus_norvegicus
ENSPNYG00000010217	tsen54	99	44.960	ENSRBIG00000043040	TSEN54	92	46.429	Rhinopithecus_bieti
ENSPNYG00000010217	tsen54	99	44.960	ENSRROG00000030797	TSEN54	92	46.429	Rhinopithecus_roxellana
ENSPNYG00000010217	tsen54	99	41.483	ENSSBOG00000013543	TSEN54	91	42.713	Saimiri_boliviensis_boliviensis
ENSPNYG00000010217	tsen54	99	43.164	ENSSHAG00000018127	TSEN54	92	43.195	Sarcophilus_harrisii
ENSPNYG00000010217	tsen54	99	51.264	ENSSFOG00015004093	tsen54	99	54.225	Scleropages_formosus
ENSPNYG00000010217	tsen54	99	69.384	ENSSMAG00000012449	tsen54	99	68.514	Scophthalmus_maximus
ENSPNYG00000010217	tsen54	100	74.800	ENSSDUG00000021506	tsen54	94	75.600	Seriola_dumerili
ENSPNYG00000010217	tsen54	100	74.400	ENSSLDG00000016303	tsen54	94	75.200	Seriola_lalandi_dorsalis
ENSPNYG00000010217	tsen54	81	42.651	ENSSPUG00000008988	TSEN54	91	42.651	Sphenodon_punctatus
ENSPNYG00000010217	tsen54	99	74.899	ENSSPAG00000008098	-	100	74.899	Stegastes_partitus
ENSPNYG00000010217	tsen54	100	67.322	ENSSPAG00000008047	tsen54	100	67.832	Stegastes_partitus
ENSPNYG00000010217	tsen54	99	44.685	ENSSSCG00000036852	TSEN54	96	44.469	Sus_scrofa
ENSPNYG00000010217	tsen54	99	42.056	ENSTGUG00000008548	TSEN54	99	45.633	Taeniopygia_guttata
ENSPNYG00000010217	tsen54	100	66.735	ENSTRUG00000004230	tsen54	93	66.735	Takifugu_rubripes
ENSPNYG00000010217	tsen54	100	63.136	ENSTNIG00000011281	tsen54	95	64.682	Tetraodon_nigroviridis
ENSPNYG00000010217	tsen54	99	41.839	ENSTTRG00000015828	TSEN54	99	43.791	Tursiops_truncatus
ENSPNYG00000010217	tsen54	99	40.972	ENSUAMG00000010045	TSEN54	99	42.494	Ursus_americanus
ENSPNYG00000010217	tsen54	99	40.972	ENSUMAG00000008979	TSEN54	99	43.848	Ursus_maritimus
ENSPNYG00000010217	tsen54	99	44.378	ENSVVUG00000011411	TSEN54	94	44.622	Vulpes_vulpes
ENSPNYG00000010217	tsen54	99	44.378	ENSXETG00000012532	tsen54	91	62.626	Xenopus_tropicalis
ENSPNYG00000010217	tsen54	100	64.407	ENSXCOG00000018245	tsen54	100	64.407	Xiphophorus_couchianus
ENSPNYG00000010217	tsen54	100	68.247	ENSXMAG00000018818	tsen54	93	68.247	Xiphophorus_maculatus