EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPNYG00000010325 (Gene tree)
Gene ID: 102198471
Gene Symbol: rab42a
Alias: wu:fk59e12|zgc:73061
Full Name: ras-related protein Rab-39B-like
Gene Type: protein_coding
Species: Pundamilia_nyererei
Status: putative
Strand: Minus strand
Length: 6337 bases
Position: chrJH419353.1:977290-983626
Accession: 102198471
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPNYP00000013600	MMR_HSR1	PF01926.23	0.00012	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPNYT00000013938	-	4489	XM_005744694	ENSPNYP00000013600	265 (aa)	XP_005744751	UPI00032A25E2

Gene Model

Click here to download ENSPNYG00000010325's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPNYG00000010325's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPNYG00000010325	rab42a	82	54.378	ENSPNYG00000015774	RAB39B	100	54.378
ENSPNYG00000010325	rab42a	59	34.177	ENSPNYG00000019639	rab23	74	34.641
ENSPNYG00000010325	rab42a	73	43.590	ENSPNYG00000008498	-	81	43.590
ENSPNYG00000010325	rab42a	59	38.365	ENSPNYG00000018613	si:dkey-13a21.4	76	38.365
ENSPNYG00000010325	rab42a	67	41.011	ENSPNYG00000010377	rab1ba	88	41.011
ENSPNYG00000010325	rab42a	62	44.242	ENSPNYG00000010491	rab25a	78	44.242
ENSPNYG00000010325	rab42a	78	31.132	ENSPNYG00000005809	-	96	30.986
ENSPNYG00000010325	rab42a	71	40.526	ENSPNYG00000023905	rab12	83	38.942
ENSPNYG00000010325	rab42a	58	38.562	ENSPNYG00000010861	rab6bb	76	38.562
ENSPNYG00000010325	rab42a	69	42.077	ENSPNYG00000018244	rab11al	84	42.077
ENSPNYG00000010325	rab42a	79	33.333	ENSPNYG00000019963	rab6ba	94	33.333
ENSPNYG00000010325	rab42a	67	42.135	ENSPNYG00000009172	rab1ab	87	42.135
ENSPNYG00000010325	rab42a	77	38.537	ENSPNYG00000002252	rab11a	87	38.537
ENSPNYG00000010325	rab42a	80	38.498	ENSPNYG00000007314	-	97	38.498
ENSPNYG00000010325	rab42a	62	39.521	ENSPNYG00000000233	rab9b	74	39.521
ENSPNYG00000010325	rab42a	63	34.940	ENSPNYG00000011135	RAB17	72	34.940
ENSPNYG00000010325	rab42a	57	33.775	ENSPNYG00000015124	hrasb	85	32.927
ENSPNYG00000010325	rab42a	70	40.860	ENSPNYG00000005326	-	86	40.860
ENSPNYG00000010325	rab42a	62	43.902	ENSPNYG00000009490	si:dkey-16l2.16	77	43.902
ENSPNYG00000010325	rab42a	63	31.737	ENSPNYG00000001744	rhebl1	88	31.737
ENSPNYG00000010325	rab42a	62	36.585	ENSPNYG00000015851	-	73	36.585
ENSPNYG00000010325	rab42a	69	41.530	ENSPNYG00000004098	rab11bb	83	41.530
ENSPNYG00000010325	rab42a	62	43.293	ENSPNYG00000007156	rab35b	80	43.293
ENSPNYG00000010325	rab42a	86	35.808	ENSPNYG00000005654	rab12	83	38.942
ENSPNYG00000010325	rab42a	59	32.278	ENSPNYG00000004845	rabl2	68	32.278
ENSPNYG00000010325	rab42a	70	33.333	ENSPNYG00000006192	rheb	94	33.333
ENSPNYG00000010325	rab42a	59	43.671	ENSPNYG00000013054	rab33ba	65	43.671
ENSPNYG00000010325	rab42a	62	39.521	ENSPNYG00000015328	RAB9A	75	39.521
ENSPNYG00000010325	rab42a	64	42.012	ENSPNYG00000004681	-	84	42.012
ENSPNYG00000010325	rab42a	71	47.340	ENSPNYG00000012426	rab2a	88	47.340
ENSPNYG00000010325	rab42a	55	41.216	ENSPNYG00000000044	rab33a	62	41.216
ENSPNYG00000010325	rab42a	62	35.976	ENSPNYG00000010615	rab5c	74	35.976
ENSPNYG00000010325	rab42a	61	35.802	ENSPNYG00000010612	rab5aa	74	35.802
ENSPNYG00000010325	rab42a	65	43.353	ENSPNYG00000007520	-	81	43.353
ENSPNYG00000010325	rab42a	80	34.234	ENSPNYG00000022091	RAB15	98	34.234
ENSPNYG00000010325	rab42a	64	41.379	ENSPNYG00000012922	zgc:101559	74	41.379
ENSPNYG00000010325	rab42a	62	39.394	ENSPNYG00000007064	rab18a	80	39.394
ENSPNYG00000010325	rab42a	61	34.337	ENSPNYG00000020409	RAB7A	79	34.337
ENSPNYG00000010325	rab42a	59	39.490	ENSPNYG00000013288	rab41	73	39.490
ENSPNYG00000010325	rab42a	62	42.331	ENSPNYG00000000512	rab15	76	42.331
ENSPNYG00000010325	rab42a	57	36.842	ENSPNYG00000005416	si:ch73-116o1.2	79	36.145
ENSPNYG00000010325	rab42a	57	33.775	ENSPNYG00000013814	KRAS	86	32.927
ENSPNYG00000010325	rab42a	54	40.559	ENSPNYG00000023810	-	67	40.559
ENSPNYG00000010325	rab42a	69	41.530	ENSPNYG00000019611	-	83	41.530
ENSPNYG00000010325	rab42a	72	32.995	ENSPNYG00000017514	rab34a	75	32.995
ENSPNYG00000010325	rab42a	72	30.244	ENSPNYG00000017665	rasl11a	78	30.244
ENSPNYG00000010325	rab42a	59	39.490	ENSPNYG00000020556	rab6a	75	39.490
ENSPNYG00000010325	rab42a	60	44.375	ENSPNYG00000009728	rab30	72	44.375
ENSPNYG00000010325	rab42a	62	41.818	ENSPNYG00000001751	rab18b	80	41.818
ENSPNYG00000010325	rab42a	82	55.300	ENSPNYG00000019276	-	100	55.300
ENSPNYG00000010325	rab42a	67	42.135	ENSPNYG00000015841	-	87	42.135
ENSPNYG00000010325	rab42a	65	32.948	ENSPNYG00000017153	rab34b	82	35.811
ENSPNYG00000010325	rab42a	62	31.361	ENSPNYG00000008014	rab32b	77	31.361
ENSPNYG00000010325	rab42a	69	42.935	ENSPNYG00000019644	rab11ba	83	42.935
ENSPNYG00000010325	rab42a	55	42.105	ENSPNYG00000003511	-	63	42.105
ENSPNYG00000010325	rab42a	67	35.165	ENSPNYG00000015355	RAB29	87	35.165
ENSPNYG00000010325	rab42a	68	41.111	ENSPNYG00000018214	rab25b	86	41.111

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPNYG00000010325	rab42a	82	96.330	ENSAPOG00000009188	rab42a	100	96.789	Acanthochromis_polyacanthus
ENSPNYG00000010325	rab42a	82	97.248	ENSACIG00000003102	rab42a	100	97.248	Amphilophus_citrinellus
ENSPNYG00000010325	rab42a	89	94.915	ENSAOCG00000012921	rab42a	94	94.737	Amphiprion_ocellaris
ENSPNYG00000010325	rab42a	89	94.915	ENSAPEG00000007713	rab42a	94	94.737	Amphiprion_percula
ENSPNYG00000010325	rab42a	82	94.954	ENSATEG00000009052	rab42a	100	94.954	Anabas_testudineus
ENSPNYG00000010325	rab42a	82	100.000	ENSACLG00000007514	rab42a	100	100.000	Astatotilapia_calliptera
ENSPNYG00000010325	rab42a	82	91.705	ENSAMXG00000032729	rab42a	100	91.705	Astyanax_mexicanus
ENSPNYG00000010325	rab42a	82	93.578	ENSCSEG00000010582	rab42a	100	93.578	Cynoglossus_semilaevis
ENSPNYG00000010325	rab42a	82	91.244	ENSDARG00000034215	rab42a	100	91.244	Danio_rerio
ENSPNYG00000010325	rab42a	74	49.746	ENSDARG00000102580	CU571310.1	93	49.746	Danio_rerio
ENSPNYG00000010325	rab42a	82	90.783	ENSELUG00000010345	rab42a	100	90.783	Esox_lucius
ENSPNYG00000010325	rab42a	82	95.413	ENSFHEG00000013106	rab42a	100	95.413	Fundulus_heteroclitus
ENSPNYG00000010325	rab42a	82	94.037	ENSGAFG00000002141	rab42a	100	94.037	Gambusia_affinis
ENSPNYG00000010325	rab42a	100	100.000	ENSHBUG00000015126	rab42a	100	100.000	Haplochromis_burtoni
ENSPNYG00000010325	rab42a	82	88.479	ENSIPUG00000011376	rab42a	100	88.479	Ictalurus_punctatus
ENSPNYG00000010325	rab42a	82	94.495	ENSKMAG00000007267	rab42a	100	94.495	Kryptolebias_marmoratus
ENSPNYG00000010325	rab42a	82	95.392	ENSLBEG00000001193	rab42a	100	95.392	Labrus_bergylta
ENSPNYG00000010325	rab42a	82	64.055	ENSLACG00000012755	-	100	64.055	Latimeria_chalumnae
ENSPNYG00000010325	rab42a	82	83.410	ENSLOCG00000003453	rab42a	100	83.410	Lepisosteus_oculatus
ENSPNYG00000010325	rab42a	82	50.917	ENSLOCG00000015825	-	99	50.917	Lepisosteus_oculatus
ENSPNYG00000010325	rab42a	82	97.248	ENSMAMG00000002296	rab42a	100	97.248	Mastacembelus_armatus
ENSPNYG00000010325	rab42a	100	100.000	ENSMZEG00005012460	rab42a	100	100.000	Maylandia_zebra
ENSPNYG00000010325	rab42a	82	93.119	ENSMMOG00000014358	rab42a	100	93.119	Mola_mola
ENSPNYG00000010325	rab42a	100	98.872	ENSNBRG00000021487	rab42a	100	98.872	Neolamprologus_brichardi
ENSPNYG00000010325	rab42a	82	95.413	ENSORLG00000022335	rab42a	100	95.413	Oryzias_latipes
ENSPNYG00000010325	rab42a	82	95.413	ENSORLG00020013895	rab42a	100	95.413	Oryzias_latipes_hni
ENSPNYG00000010325	rab42a	82	95.413	ENSORLG00015004273	rab42a	100	95.413	Oryzias_latipes_hsok
ENSPNYG00000010325	rab42a	82	95.413	ENSOMEG00000020418	rab42a	100	95.413	Oryzias_melastigma
ENSPNYG00000010325	rab42a	82	77.419	ENSPKIG00000021215	-	100	77.419	Paramormyrops_kingsleyae
ENSPNYG00000010325	rab42a	81	47.685	ENSPKIG00000015234	-	99	47.685	Paramormyrops_kingsleyae
ENSPNYG00000010325	rab42a	74	97.462	ENSPMGG00000024112	rab42a	90	97.462	Periophthalmus_magnuspinnatus
ENSPNYG00000010325	rab42a	95	85.156	ENSPFOG00000004838	rab42a	96	85.156	Poecilia_formosa
ENSPNYG00000010325	rab42a	82	94.037	ENSPLAG00000005628	rab42a	100	94.037	Poecilia_latipinna
ENSPNYG00000010325	rab42a	82	93.578	ENSPMEG00000019497	rab42a	100	93.578	Poecilia_mexicana
ENSPNYG00000010325	rab42a	82	94.037	ENSPREG00000013962	rab42a	100	94.037	Poecilia_reticulata
ENSPNYG00000010325	rab42a	82	91.244	ENSPNAG00000016567	rab42a	100	91.244	Pygocentrus_nattereri
ENSPNYG00000010325	rab42a	82	46.330	ENSSFOG00015016000	-	97	46.330	Scleropages_formosus
ENSPNYG00000010325	rab42a	82	85.714	ENSSFOG00015020732	rab42a	100	85.714	Scleropages_formosus
ENSPNYG00000010325	rab42a	82	94.037	ENSSMAG00000020311	rab42a	100	94.037	Scophthalmus_maximus
ENSPNYG00000010325	rab42a	82	96.330	ENSSDUG00000011851	rab42a	100	96.330	Seriola_dumerili
ENSPNYG00000010325	rab42a	82	96.330	ENSSLDG00000020354	rab42a	100	96.330	Seriola_lalandi_dorsalis
ENSPNYG00000010325	rab42a	82	97.706	ENSSPAG00000016167	rab42a	100	97.706	Stegastes_partitus
ENSPNYG00000010325	rab42a	82	95.872	ENSTRUG00000010224	rab42a	100	95.872	Takifugu_rubripes
ENSPNYG00000010325	rab42a	82	94.495	ENSXCOG00000003428	rab42a	100	94.495	Xiphophorus_couchianus
ENSPNYG00000010325	rab42a	82	94.495	ENSXMAG00000028376	rab42a	100	94.495	Xiphophorus_maculatus