EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPNYG00000010526 (Gene tree)
Gene ID: 102201338
Gene Symbol: scaf4b
Alias: im:6900467|si:ch211-245g11.2
Full Name: splicing factor%2C arginine/serine-rich 15-like
Gene Type: protein_coding
Species: Pundamilia_nyererei
Status: putative
Strand: Minus strand
Length: 28229 bases
Position: chrJH419271.1:2374699-2402927
Accession: 102201338
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPNYP00000013879	RRM_1	PF00076.22	1.3e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPNYT00000014226	-	3323	XM_005735997	ENSPNYP00000013879	749 (aa)	XP_005736054	UPI0003AFE322

Gene Model

Click here to download ENSPNYG00000010526's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPNYG00000010526's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPNYG00000010526	scaf4b	67	64.732	ENSAPOG00000002946	scaf4a	50	61.905	Acanthochromis_polyacanthus
ENSPNYG00000010526	scaf4b	100	77.704	ENSAPOG00000019615	scaf4b	100	79.156	Acanthochromis_polyacanthus
ENSPNYG00000010526	scaf4b	62	72.093	ENSAOCG00000000615	scaf4a	50	61.905	Amphiprion_ocellaris
ENSPNYG00000010526	scaf4b	100	78.836	ENSAOCG00000010433	scaf4b	100	80.159	Amphiprion_ocellaris
ENSPNYG00000010526	scaf4b	100	78.968	ENSAPEG00000010913	scaf4b	100	80.291	Amphiprion_percula
ENSPNYG00000010526	scaf4b	62	71.512	ENSAPEG00000021229	scaf4a	50	61.905	Amphiprion_percula
ENSPNYG00000010526	scaf4b	98	73.529	ENSATEG00000011758	scaf4b	100	73.797	Anabas_testudineus
ENSPNYG00000010526	scaf4b	100	99.466	ENSACLG00000024833	scaf4b	100	99.466	Astatotilapia_calliptera
ENSPNYG00000010526	scaf4b	55	74.051	ENSCJAG00000008993	SCAF4	64	61.011	Callithrix_jacchus
ENSPNYG00000010526	scaf4b	53	74.684	ENSCAFG00020026019	SCAF4	67	58.801	Canis_lupus_dingo
ENSPNYG00000010526	scaf4b	53	74.051	ENSTSYG00000011344	SCAF4	58	56.654	Carlito_syrichta
ENSPNYG00000010526	scaf4b	100	62.286	ENSCSEG00000012808	-	99	61.660	Cynoglossus_semilaevis
ENSPNYG00000010526	scaf4b	71	51.027	ENSCSEG00000019549	scaf4a	60	47.084	Cynoglossus_semilaevis
ENSPNYG00000010526	scaf4b	100	69.697	ENSCVAG00000009142	scaf4b	100	69.485	Cyprinodon_variegatus
ENSPNYG00000010526	scaf4b	57	62.286	ENSDARG00000018854	scaf4b	79	58.042	Danio_rerio
ENSPNYG00000010526	scaf4b	54	59.574	ENSEBUG00000003891	SCAF8	58	51.273	Eptatretus_burgeri
ENSPNYG00000010526	scaf4b	100	71.731	ENSFHEG00000007634	scaf4b	100	71.202	Fundulus_heteroclitus
ENSPNYG00000010526	scaf4b	57	66.443	ENSGMOG00000015188	scaf4a	60	56.780	Gadus_morhua
ENSPNYG00000010526	scaf4b	62	71.978	ENSGALG00000033965	SCAF4	52	56.705	Gallus_gallus
ENSPNYG00000010526	scaf4b	52	72.143	ENSGACG00000020580	scaf4a	53	60.305	Gasterosteus_aculeatus
ENSPNYG00000010526	scaf4b	100	72.955	ENSKMAG00000005742	scaf4b	100	73.351	Kryptolebias_marmoratus
ENSPNYG00000010526	scaf4b	74	50.347	ENSLBEG00000014675	scaf4a	52	52.941	Labrus_bergylta
ENSPNYG00000010526	scaf4b	92	48.894	ENSLOCG00000009162	scaf4a	65	51.942	Lepisosteus_oculatus
ENSPNYG00000010526	scaf4b	55	74.214	ENSLAFG00000010710	SCAF4	51	61.803	Loxodonta_africana
ENSPNYG00000010526	scaf4b	61	59.794	ENSMGAG00000012762	SCAF8	55	43.189	Meleagris_gallopavo
ENSPNYG00000010526	scaf4b	55	73.418	ENSMODG00000021040	SCAF4	55	56.870	Monodelphis_domestica
ENSPNYG00000010526	scaf4b	82	56.835	ENSMALG00000013825	scaf4a	54	59.583	Monopterus_albus
ENSPNYG00000010526	scaf4b	71	75.552	ENSONIG00000005610	scaf4b	99	75.394	Oreochromis_niloticus
ENSPNYG00000010526	scaf4b	60	57.075	ENSONIG00000004687	scaf4a	52	58.276	Oreochromis_niloticus
ENSPNYG00000010526	scaf4b	55	74.051	ENSOCUG00000008336	SCAF4	52	61.624	Oryctolagus_cuniculus
ENSPNYG00000010526	scaf4b	100	64.675	ENSORLG00000003420	scaf4b	100	64.675	Oryzias_latipes
ENSPNYG00000010526	scaf4b	100	65.252	ENSORLG00020013853	scaf4b	100	65.252	Oryzias_latipes_hni
ENSPNYG00000010526	scaf4b	53	74.051	ENSOGAG00000014653	SCAF4	50	49.814	Otolemur_garnettii
ENSPNYG00000010526	scaf4b	57	68.571	ENSPKIG00000022408	scaf4a	100	46.676	Paramormyrops_kingsleyae
ENSPNYG00000010526	scaf4b	55	58.273	ENSPMAG00000006192	SCAF8	68	58.333	Petromyzon_marinus
ENSPNYG00000010526	scaf4b	54	74.051	ENSPCIG00000028183	SCAF4	51	57.252	Phascolarctos_cinereus
ENSPNYG00000010526	scaf4b	83	70.111	ENSPFOG00000003261	scaf4b	80	70.111	Poecilia_formosa
ENSPNYG00000010526	scaf4b	100	65.779	ENSPLAG00000004403	-	100	67.300	Poecilia_latipinna
ENSPNYG00000010526	scaf4b	100	65.779	ENSPMEG00000006666	-	100	67.300	Poecilia_mexicana
ENSPNYG00000010526	scaf4b	100	65.570	ENSPREG00000013510	scaf4b	100	66.582	Poecilia_reticulata
ENSPNYG00000010526	scaf4b	55	74.051	ENSPCOG00000018710	SCAF4	53	60.536	Propithecus_coquereli
ENSPNYG00000010526	scaf4b	69	71.338	ENSPNAG00000015199	-	61	71.338	Pygocentrus_nattereri
ENSPNYG00000010526	scaf4b	55	75.316	ENSRNOG00000002104	Scaf4	54	63.740	Rattus_norvegicus
ENSPNYG00000010526	scaf4b	55	74.051	ENSSHAG00000001581	SCAF4	56	57.252	Sarcophilus_harrisii
ENSPNYG00000010526	scaf4b	63	41.432	ENSSFOG00015006338	scaf4a	61	40.652	Scleropages_formosus
ENSPNYG00000010526	scaf4b	100	74.016	ENSSMAG00000003738	scaf4b	100	73.885	Scophthalmus_maximus
ENSPNYG00000010526	scaf4b	100	77.297	ENSSDUG00000012380	scaf4b	100	77.297	Seriola_dumerili
ENSPNYG00000010526	scaf4b	100	77.165	ENSSLDG00000023152	-	100	77.165	Seriola_lalandi_dorsalis
ENSPNYG00000010526	scaf4b	100	61.733	ENSTRUG00000009536	-	100	61.600	Takifugu_rubripes
ENSPNYG00000010526	scaf4b	59	69.565	ENSTNIG00000016885	SCAF8	53	53.405	Tetraodon_nigroviridis
ENSPNYG00000010526	scaf4b	53	74.051	ENSTTRG00000010963	SCAF4	50	60.536	Tursiops_truncatus
ENSPNYG00000010526	scaf4b	54	75.974	ENSUAMG00000008860	SCAF4	50	61.624	Ursus_americanus
ENSPNYG00000010526	scaf4b	52	75.974	ENSUMAG00000016962	SCAF4	51	61.943	Ursus_maritimus
ENSPNYG00000010526	scaf4b	50	60.847	ENSVPAG00000012465	SCAF8	55	54.508	Vicugna_pacos
ENSPNYG00000010526	scaf4b	60	65.641	ENSXETG00000007351	scaf4	50	61.071	Xenopus_tropicalis