EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPNYG00000010589 (Gene tree)
Gene ID: 102201615
Gene Symbol: urb1
Alias: mp:zf637-1-000544|zf637-1-000544
Full Name: URB1 ribosome biogenesis homolog
Gene Type: protein_coding
Species: Pundamilia_nyererei
Status: putative
Strand: Minus strand
Length: 16318 bases
Position: chrJH419271.1:2406649-2422966
Accession: 102201615
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPNYP00000014265	Npa1	PF11707.8	4.2e-74	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPNYT00000014623	-	6417	XM_005735998	ENSPNYP00000014265	2138 (aa)	XP_005736055	-

Gene Model

Click here to download ENSPNYG00000010589's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPNYG00000010589's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPNYG00000010589	urb1	99	43.556	ENSG00000142207	URB1	99	43.584	Homo_sapiens
ENSPNYG00000010589	urb1	100	72.227	ENSAPOG00000020308	urb1	100	72.362	Acanthochromis_polyacanthus
ENSPNYG00000010589	urb1	99	43.750	ENSAMEG00000011998	URB1	99	43.979	Ailuropoda_melanoleuca
ENSPNYG00000010589	urb1	97	78.438	ENSACIG00000003248	urb1	98	78.438	Amphilophus_citrinellus
ENSPNYG00000010589	urb1	100	70.055	ENSAOCG00000010364	urb1	100	70.284	Amphiprion_ocellaris
ENSPNYG00000010589	urb1	100	73.330	ENSAPEG00000010758	urb1	100	73.376	Amphiprion_percula
ENSPNYG00000010589	urb1	100	70.703	ENSATEG00000011790	urb1	100	70.703	Anabas_testudineus
ENSPNYG00000010589	urb1	97	46.026	ENSAPLG00000012791	URB1	99	45.995	Anas_platyrhynchos
ENSPNYG00000010589	urb1	99	43.962	ENSACAG00000002817	URB1	97	44.518	Anolis_carolinensis
ENSPNYG00000010589	urb1	99	43.747	ENSANAG00000024617	URB1	99	43.632	Aotus_nancymaae
ENSPNYG00000010589	urb1	100	92.923	ENSACLG00000024865	urb1	100	92.923	Astatotilapia_calliptera
ENSPNYG00000010589	urb1	99	47.895	ENSAMXG00000012306	urb1	99	47.895	Astyanax_mexicanus
ENSPNYG00000010589	urb1	99	42.695	ENSBTAG00000012412	URB1	99	43.192	Bos_taurus
ENSPNYG00000010589	urb1	99	43.254	ENSCJAG00000009118	URB1	99	43.106	Callithrix_jacchus
ENSPNYG00000010589	urb1	99	43.019	ENSCAFG00000008892	URB1	99	43.019	Canis_familiaris
ENSPNYG00000010589	urb1	99	42.457	ENSCAFG00020025994	-	99	42.383	Canis_lupus_dingo
ENSPNYG00000010589	urb1	99	43.108	ENSCAFG00020025987	-	99	43.255	Canis_lupus_dingo
ENSPNYG00000010589	urb1	99	42.682	ENSCHIG00000015645	URB1	99	42.945	Capra_hircus
ENSPNYG00000010589	urb1	100	43.467	ENSTSYG00000013286	URB1	99	43.418	Carlito_syrichta
ENSPNYG00000010589	urb1	98	41.928	ENSCAPG00000015589	URB1	99	42.011	Cavia_aperea
ENSPNYG00000010589	urb1	100	42.459	ENSCPOG00000006748	URB1	99	42.539	Cavia_porcellus
ENSPNYG00000010589	urb1	99	43.394	ENSCCAG00000021299	URB1	99	43.609	Cebus_capucinus
ENSPNYG00000010589	urb1	100	43.611	ENSCATG00000042630	URB1	99	43.766	Cercocebus_atys
ENSPNYG00000010589	urb1	100	43.617	ENSCLAG00000005262	URB1	99	44.028	Chinchilla_lanigera
ENSPNYG00000010589	urb1	100	42.832	ENSCSAG00000009584	URB1	99	42.988	Chlorocebus_sabaeus
ENSPNYG00000010589	urb1	99	46.371	ENSCPBG00000006454	URB1	99	46.614	Chrysemys_picta_bellii
ENSPNYG00000010589	urb1	100	43.693	ENSCANG00000031088	URB1	99	43.848	Colobus_angolensis_palliatus
ENSPNYG00000010589	urb1	99	43.526	ENSCGRG00001010616	Urb1	99	43.482	Cricetulus_griseus_chok1gshd
ENSPNYG00000010589	urb1	98	43.641	ENSCGRG00000015840	Urb1	99	43.571	Cricetulus_griseus_crigri
ENSPNYG00000010589	urb1	100	64.693	ENSCSEG00000012616	urb1	99	64.693	Cynoglossus_semilaevis
ENSPNYG00000010589	urb1	96	67.282	ENSCVAG00000009076	urb1	99	67.506	Cyprinodon_variegatus
ENSPNYG00000010589	urb1	99	51.571	ENSDARG00000060308	urb1	99	51.571	Danio_rerio
ENSPNYG00000010589	urb1	86	47.038	ENSDNOG00000015586	URB1	99	47.038	Dasypus_novemcinctus
ENSPNYG00000010589	urb1	99	43.076	ENSDORG00000006735	Urb1	99	43.336	Dipodomys_ordii
ENSPNYG00000010589	urb1	85	51.718	ENSETEG00000009080	URB1	84	51.718	Echinops_telfairi
ENSPNYG00000010589	urb1	93	52.934	ENSEASG00005007711	URB1	98	43.882	Equus_asinus_asinus
ENSPNYG00000010589	urb1	95	55.172	ENSECAG00000013206	URB1	99	43.758	Equus_caballus
ENSPNYG00000010589	urb1	99	55.786	ENSELUG00000020516	urb1	96	61.891	Esox_lucius
ENSPNYG00000010589	urb1	99	42.838	ENSFCAG00000002177	URB1	99	43.059	Felis_catus
ENSPNYG00000010589	urb1	98	42.154	ENSFALG00000004636	URB1	98	42.518	Ficedula_albicollis
ENSPNYG00000010589	urb1	99	43.681	ENSFDAG00000007288	URB1	95	43.391	Fukomys_damarensis
ENSPNYG00000010589	urb1	100	63.576	ENSFHEG00000000202	urb1	99	65.132	Fundulus_heteroclitus
ENSPNYG00000010589	urb1	93	56.927	ENSGMOG00000001838	urb1	94	56.927	Gadus_morhua
ENSPNYG00000010589	urb1	99	45.519	ENSGALG00000015887	URB1	99	45.611	Gallus_gallus
ENSPNYG00000010589	urb1	99	64.653	ENSGAFG00000020694	urb1	99	64.907	Gambusia_affinis
ENSPNYG00000010589	urb1	99	69.186	ENSGACG00000011703	urb1	99	69.097	Gasterosteus_aculeatus
ENSPNYG00000010589	urb1	99	45.960	ENSGAGG00000022544	URB1	99	46.198	Gopherus_agassizii
ENSPNYG00000010589	urb1	99	43.419	ENSGGOG00000000285	URB1	99	43.584	Gorilla_gorilla
ENSPNYG00000010589	urb1	100	92.702	ENSHBUG00000001904	urb1	100	92.702	Haplochromis_burtoni
ENSPNYG00000010589	urb1	99	42.402	ENSHGLG00000004907	URB1	99	42.396	Heterocephalus_glaber_female
ENSPNYG00000010589	urb1	99	42.695	ENSHGLG00100010749	URB1	99	42.689	Heterocephalus_glaber_male
ENSPNYG00000010589	urb1	76	70.680	ENSHCOG00000018683	urb1	99	70.874	Hippocampus_comes
ENSPNYG00000010589	urb1	99	47.924	ENSIPUG00000014721	urb1	99	48.032	Ictalurus_punctatus
ENSPNYG00000010589	urb1	99	43.444	ENSSTOG00000004539	URB1	99	43.335	Ictidomys_tridecemlineatus
ENSPNYG00000010589	urb1	97	70.875	ENSKMAG00000006001	urb1	99	70.875	Kryptolebias_marmoratus
ENSPNYG00000010589	urb1	97	67.615	ENSLBEG00000027208	urb1	99	67.615	Labrus_bergylta
ENSPNYG00000010589	urb1	99	43.747	ENSLACG00000017059	URB1	99	44.216	Latimeria_chalumnae
ENSPNYG00000010589	urb1	99	51.243	ENSLOCG00000009190	urb1	98	51.701	Lepisosteus_oculatus
ENSPNYG00000010589	urb1	99	43.594	ENSLAFG00000010407	URB1	98	43.639	Loxodonta_africana
ENSPNYG00000010589	urb1	100	43.499	ENSMFAG00000034391	URB1	97	43.655	Macaca_fascicularis
ENSPNYG00000010589	urb1	100	43.516	ENSMMUG00000010295	URB1	99	43.673	Macaca_mulatta
ENSPNYG00000010589	urb1	100	42.738	ENSMNEG00000032981	URB1	99	42.957	Macaca_nemestrina
ENSPNYG00000010589	urb1	100	43.630	ENSMLEG00000041435	URB1	99	44.042	Mandrillus_leucophaeus
ENSPNYG00000010589	urb1	99	69.901	ENSMAMG00000011238	urb1	99	69.810	Mastacembelus_armatus
ENSPNYG00000010589	urb1	100	88.819	ENSMZEG00005011862	urb1	100	88.819	Maylandia_zebra
ENSPNYG00000010589	urb1	98	45.528	ENSMGAG00000014512	URB1	99	45.798	Meleagris_gallopavo
ENSPNYG00000010589	urb1	91	52.266	ENSMAUG00000010516	Urb1	99	51.551	Mesocricetus_auratus
ENSPNYG00000010589	urb1	99	43.270	ENSMICG00000016424	URB1	99	43.503	Microcebus_murinus
ENSPNYG00000010589	urb1	99	42.588	ENSMOCG00000012613	Urb1	98	42.908	Microtus_ochrogaster
ENSPNYG00000010589	urb1	99	43.244	ENSMODG00000021076	URB1	99	43.546	Monodelphis_domestica
ENSPNYG00000010589	urb1	99	68.857	ENSMALG00000017411	urb1	99	68.857	Monopterus_albus
ENSPNYG00000010589	urb1	99	43.255	MGP_CAROLIEiJ_G0020948	Urb1	99	43.255	Mus_caroli
ENSPNYG00000010589	urb1	99	42.946	ENSMUSG00000039929	Urb1	99	42.946	Mus_musculus
ENSPNYG00000010589	urb1	99	42.990	MGP_PahariEiJ_G0016653	Urb1	99	43.078	Mus_pahari
ENSPNYG00000010589	urb1	99	42.870	MGP_SPRETEiJ_G0021854	Urb1	99	42.870	Mus_spretus
ENSPNYG00000010589	urb1	99	43.742	ENSMPUG00000001123	URB1	99	43.927	Mustela_putorius_furo
ENSPNYG00000010589	urb1	99	42.399	ENSNGAG00000001905	Urb1	98	42.616	Nannospalax_galili
ENSPNYG00000010589	urb1	80	90.773	ENSNBRG00000001049	urb1	99	90.773	Neolamprologus_brichardi
ENSPNYG00000010589	urb1	99	42.197	ENSNLEG00000026872	URB1	99	42.275	Nomascus_leucogenys
ENSPNYG00000010589	urb1	90	54.545	ENSMEUG00000010828	URB1	96	40.831	Notamacropus_eugenii
ENSPNYG00000010589	urb1	99	41.999	ENSOPRG00000013482	URB1	99	42.313	Ochotona_princeps
ENSPNYG00000010589	urb1	99	42.845	ENSODEG00000002587	URB1	98	43.156	Octodon_degus
ENSPNYG00000010589	urb1	100	90.531	ENSONIG00000005599	urb1	100	90.531	Oreochromis_niloticus
ENSPNYG00000010589	urb1	99	44.226	ENSOCUG00000009381	URB1	99	44.547	Oryctolagus_cuniculus
ENSPNYG00000010589	urb1	99	65.487	ENSORLG00000003429	urb1	99	65.487	Oryzias_latipes
ENSPNYG00000010589	urb1	99	65.179	ENSORLG00020013785	urb1	99	65.179	Oryzias_latipes_hni
ENSPNYG00000010589	urb1	99	64.424	ENSORLG00015019421	urb1	99	64.424	Oryzias_latipes_hsok
ENSPNYG00000010589	urb1	81	69.249	ENSOMEG00000002094	urb1	99	69.249	Oryzias_melastigma
ENSPNYG00000010589	urb1	100	43.586	ENSOGAG00000017140	URB1	99	43.866	Otolemur_garnettii
ENSPNYG00000010589	urb1	95	47.532	ENSOARG00000013679	URB1	99	46.915	Ovis_aries
ENSPNYG00000010589	urb1	99	43.394	ENSPPAG00000003423	URB1	99	43.559	Pan_paniscus
ENSPNYG00000010589	urb1	99	42.982	ENSPPRG00000023131	URB1	99	43.261	Panthera_pardus
ENSPNYG00000010589	urb1	87	45.000	ENSPTIG00000016125	URB1	92	45.000	Panthera_tigris_altaica
ENSPNYG00000010589	urb1	99	43.305	ENSPTRG00000013852	URB1	99	43.471	Pan_troglodytes
ENSPNYG00000010589	urb1	100	43.586	ENSPANG00000021964	URB1	99	43.742	Papio_anubis
ENSPNYG00000010589	urb1	99	52.327	ENSPKIG00000003683	urb1	98	52.618	Paramormyrops_kingsleyae
ENSPNYG00000010589	urb1	99	43.615	ENSPEMG00000021205	Urb1	98	43.615	Peromyscus_maniculatus_bairdii
ENSPNYG00000010589	urb1	80	32.068	ENSPMAG00000009733	URB1	99	32.589	Petromyzon_marinus
ENSPNYG00000010589	urb1	99	42.770	ENSPCIG00000016350	URB1	99	43.532	Phascolarctos_cinereus
ENSPNYG00000010589	urb1	97	66.682	ENSPLAG00000004371	urb1	100	66.682	Poecilia_latipinna
ENSPNYG00000010589	urb1	100	67.139	ENSPMEG00000006634	urb1	100	67.139	Poecilia_mexicana
ENSPNYG00000010589	urb1	100	66.549	ENSPREG00000013453	urb1	100	66.549	Poecilia_reticulata
ENSPNYG00000010589	urb1	99	43.308	ENSPPYG00000011359	URB1	99	43.521	Pongo_abelii
ENSPNYG00000010589	urb1	99	38.468	ENSPCAG00000007430	URB1	99	38.688	Procavia_capensis
ENSPNYG00000010589	urb1	99	43.344	ENSPCOG00000022695	URB1	99	43.714	Propithecus_coquereli
ENSPNYG00000010589	urb1	99	42.845	ENSPVAG00000000889	URB1	98	43.079	Pteropus_vampyrus
ENSPNYG00000010589	urb1	99	48.852	ENSPNAG00000019324	urb1	99	49.329	Pygocentrus_nattereri
ENSPNYG00000010589	urb1	99	42.624	ENSRNOG00000002080	Urb1	99	42.851	Rattus_norvegicus
ENSPNYG00000010589	urb1	100	43.543	ENSRBIG00000033122	URB1	99	43.567	Rhinopithecus_bieti
ENSPNYG00000010589	urb1	100	43.518	ENSRROG00000040237	URB1	99	43.543	Rhinopithecus_roxellana
ENSPNYG00000010589	urb1	99	43.324	ENSSBOG00000027672	URB1	99	43.476	Saimiri_boliviensis_boliviensis
ENSPNYG00000010589	urb1	99	43.674	ENSSHAG00000005140	URB1	99	43.935	Sarcophilus_harrisii
ENSPNYG00000010589	urb1	93	54.076	ENSSFOG00015000339	urb1	99	54.455	Scleropages_formosus
ENSPNYG00000010589	urb1	100	70.963	ENSSMAG00000003782	urb1	100	71.359	Scophthalmus_maximus
ENSPNYG00000010589	urb1	100	74.658	ENSSDUG00000012313	urb1	99	74.658	Seriola_dumerili
ENSPNYG00000010589	urb1	100	74.481	ENSSLDG00000023179	urb1	99	74.481	Seriola_lalandi_dorsalis
ENSPNYG00000010589	urb1	99	44.991	ENSSPUG00000012447	URB1	99	45.130	Sphenodon_punctatus
ENSPNYG00000010589	urb1	99	74.721	ENSSPAG00000006325	urb1	99	74.721	Stegastes_partitus
ENSPNYG00000010589	urb1	99	42.623	ENSSSCG00000032024	URB1	98	42.844	Sus_scrofa
ENSPNYG00000010589	urb1	74	47.605	ENSTGUG00000013442	URB1	100	47.605	Taeniopygia_guttata
ENSPNYG00000010589	urb1	100	66.120	ENSTRUG00000009372	urb1	100	65.942	Takifugu_rubripes
ENSPNYG00000010589	urb1	99	64.730	ENSTNIG00000016277	urb1	99	64.535	Tetraodon_nigroviridis
ENSPNYG00000010589	urb1	72	49.425	ENSTBEG00000010044	URB1	72	49.425	Tupaia_belangeri
ENSPNYG00000010589	urb1	88	50.604	ENSTTRG00000007712	URB1	90	49.840	Tursiops_truncatus
ENSPNYG00000010589	urb1	99	43.051	ENSUAMG00000012231	URB1	99	43.274	Ursus_americanus
ENSPNYG00000010589	urb1	88	45.478	ENSUMAG00000017419	URB1	94	45.222	Ursus_maritimus
ENSPNYG00000010589	urb1	65	60.800	ENSVPAG00000001164	URB1	65	60.800	Vicugna_pacos
ENSPNYG00000010589	urb1	99	43.490	ENSVVUG00000000551	URB1	99	43.739	Vulpes_vulpes
ENSPNYG00000010589	urb1	99	45.235	ENSXETG00000009895	urb1	98	45.235	Xenopus_tropicalis
ENSPNYG00000010589	urb1	100	64.069	ENSXCOG00000005500	urb1	100	64.024	Xiphophorus_couchianus
ENSPNYG00000010589	urb1	100	64.121	ENSXMAG00000007253	urb1	100	64.076	Xiphophorus_maculatus