EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPNYG00000010956 (Gene tree)
Gene ID: 102203240
Gene Symbol: blm
Alias: -
Full Name: Bloom syndrome protein homolog
Gene Type: protein_coding
Species: Pundamilia_nyererei
Status: putative
Strand: Plus strand
Length: 8536 bases
Position: chrJH419240.1:2183075-2191610
Accession: 102203240
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPNYP00000014484	HRDC	PF00570.23	8.3e-15	1	1
ENSPNYP00000014484	BDHCT	PF08072.11	8.6e-19	1	1
ENSPNYP00000014484	DEAD	PF00270.29	6.5e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPNYT00000014852	-	4020	XM_013910039	ENSPNYP00000014484	1339 (aa)	XP_013765493	-

Gene Model

Click here to download ENSPNYG00000010956's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPNYG00000010956's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPNYG00000010956	blm	57	50.696	ENSG00000197299	BLM	59	51.529	Homo_sapiens
ENSPNYG00000010956	blm	100	66.713	ENSAPOG00000017966	blm	91	84.737	Acanthochromis_polyacanthus
ENSPNYG00000010956	blm	84	52.823	ENSAMEG00000013843	BLM	84	52.677	Ailuropoda_melanoleuca
ENSPNYG00000010956	blm	100	78.267	ENSACIG00000023762	blm	100	78.409	Amphilophus_citrinellus
ENSPNYG00000010956	blm	95	84.965	ENSAOCG00000003318	blm	91	85.664	Amphiprion_ocellaris
ENSPNYG00000010956	blm	95	84.965	ENSAPEG00000018105	blm	91	85.490	Amphiprion_percula
ENSPNYG00000010956	blm	95	86.491	ENSATEG00000006421	blm	91	87.018	Anabas_testudineus
ENSPNYG00000010956	blm	78	43.745	ENSAPLG00000006878	BLM	71	51.217	Anas_platyrhynchos
ENSPNYG00000010956	blm	57	54.847	ENSACAG00000014275	BLM	84	54.707	Anolis_carolinensis
ENSPNYG00000010956	blm	57	51.896	ENSANAG00000038415	BLM	59	51.601	Aotus_nancymaae
ENSPNYG00000010956	blm	100	89.141	ENSACLG00000020354	blm	100	89.141	Astatotilapia_calliptera
ENSPNYG00000010956	blm	99	50.302	ENSAMXG00000016970	blm	99	50.910	Astyanax_mexicanus
ENSPNYG00000010956	blm	79	50.346	ENSBTAG00000020301	BLM	86	50.346	Bos_taurus
ENSPNYG00000010956	blm	72	44.526	ENSCJAG00000009803	BLM	59	51.943	Callithrix_jacchus
ENSPNYG00000010956	blm	84	53.418	ENSCAFG00000012385	BLM	83	52.889	Canis_familiaris
ENSPNYG00000010956	blm	84	53.418	ENSCAFG00020016111	BLM	89	54.509	Canis_lupus_dingo
ENSPNYG00000010956	blm	61	50.824	ENSCHIG00000010329	BLM	88	51.243	Capra_hircus
ENSPNYG00000010956	blm	87	51.957	ENSTSYG00000012368	BLM	89	51.601	Carlito_syrichta
ENSPNYG00000010956	blm	51	57.895	ENSCAPG00000017976	BLM	70	53.804	Cavia_aperea
ENSPNYG00000010956	blm	67	53.488	ENSCPOG00000001761	BLM	88	50.538	Cavia_porcellus
ENSPNYG00000010956	blm	57	51.834	ENSCCAG00000023069	BLM	60	51.429	Cebus_capucinus
ENSPNYG00000010956	blm	57	51.047	ENSCATG00000040609	BLM	90	41.209	Cercocebus_atys
ENSPNYG00000010956	blm	87	51.381	ENSCLAG00000012111	BLM	88	51.559	Chinchilla_lanigera
ENSPNYG00000010956	blm	57	50.816	ENSCSAG00000017040	BLM	59	51.412	Chlorocebus_sabaeus
ENSPNYG00000010956	blm	53	80.000	ENSCHOG00000006255	BLM	68	80.000	Choloepus_hoffmanni
ENSPNYG00000010956	blm	88	43.152	ENSCPBG00000025000	BLM	99	45.226	Chrysemys_picta_bellii
ENSPNYG00000010956	blm	56	58.333	ENSCANG00000034808	BLM	50	58.333	Colobus_angolensis_palliatus
ENSPNYG00000010956	blm	99	40.869	ENSCGRG00001024897	Blm	99	40.644	Cricetulus_griseus_chok1gshd
ENSPNYG00000010956	blm	93	59.518	ENSCSEG00000013483	blm	99	59.624	Cynoglossus_semilaevis
ENSPNYG00000010956	blm	71	71.795	ENSCVAG00000017583	blm	82	77.841	Cyprinodon_variegatus
ENSPNYG00000010956	blm	95	70.537	ENSDARG00000077089	blm	92	71.552	Danio_rerio
ENSPNYG00000010956	blm	84	52.405	ENSDNOG00000010159	BLM	54	53.216	Dasypus_novemcinctus
ENSPNYG00000010956	blm	72	45.946	ENSDORG00000011033	Blm	99	46.132	Dipodomys_ordii
ENSPNYG00000010956	blm	57	51.415	ENSEASG00005006727	BLM	59	50.976	Equus_asinus_asinus
ENSPNYG00000010956	blm	57	55.362	ENSECAG00000011405	BLM	58	55.417	Equus_caballus
ENSPNYG00000010956	blm	60	55.814	ENSEEUG00000001434	BLM	64	55.814	Erinaceus_europaeus
ENSPNYG00000010956	blm	95	73.868	ENSELUG00000019098	blm	87	77.165	Esox_lucius
ENSPNYG00000010956	blm	53	53.342	ENSFCAG00000006087	BLM	84	53.342	Felis_catus
ENSPNYG00000010956	blm	72	45.677	ENSFALG00000010981	BLM	68	52.302	Ficedula_albicollis
ENSPNYG00000010956	blm	87	53.181	ENSFDAG00000012658	BLM	88	52.471	Fukomys_damarensis
ENSPNYG00000010956	blm	100	63.121	ENSFHEG00000002553	blm	100	63.305	Fundulus_heteroclitus
ENSPNYG00000010956	blm	99	52.606	ENSGMOG00000016431	blm	98	59.884	Gadus_morhua
ENSPNYG00000010956	blm	79	45.108	ENSGALG00000008256	BLM	100	40.027	Gallus_gallus
ENSPNYG00000010956	blm	100	61.544	ENSGAFG00000001117	blm	100	62.708	Gambusia_affinis
ENSPNYG00000010956	blm	99	62.045	ENSGACG00000010863	blm	77	91.358	Gasterosteus_aculeatus
ENSPNYG00000010956	blm	62	47.271	ENSGAGG00000005383	BLM	97	45.000	Gopherus_agassizii
ENSPNYG00000010956	blm	57	50.926	ENSGGOG00000007710	BLM	90	41.484	Gorilla_gorilla
ENSPNYG00000010956	blm	100	89.993	ENSHBUG00000015943	blm	100	89.993	Haplochromis_burtoni
ENSPNYG00000010956	blm	72	43.808	ENSHGLG00000013231	BLM	82	52.859	Heterocephalus_glaber_female
ENSPNYG00000010956	blm	72	62.644	ENSHCOG00000011455	blm	100	61.855	Hippocampus_comes
ENSPNYG00000010956	blm	73	54.928	ENSIPUG00000000529	blm	86	54.119	Ictalurus_punctatus
ENSPNYG00000010956	blm	64	50.535	ENSSTOG00000005000	BLM	89	50.531	Ictidomys_tridecemlineatus
ENSPNYG00000010956	blm	65	49.505	ENSJJAG00000016322	Blm	73	50.000	Jaculus_jaculus
ENSPNYG00000010956	blm	100	65.570	ENSKMAG00000016608	blm	100	65.360	Kryptolebias_marmoratus
ENSPNYG00000010956	blm	57	71.256	ENSLBEG00000018729	blm	97	70.979	Labrus_bergylta
ENSPNYG00000010956	blm	57	55.359	ENSLACG00000006490	BLM	58	55.359	Latimeria_chalumnae
ENSPNYG00000010956	blm	95	68.190	ENSLOCG00000014302	blm	91	67.838	Lepisosteus_oculatus
ENSPNYG00000010956	blm	57	51.047	ENSMFAG00000042982	BLM	90	41.758	Macaca_fascicularis
ENSPNYG00000010956	blm	57	51.047	ENSMMUG00000019526	BLM	90	41.209	Macaca_mulatta
ENSPNYG00000010956	blm	57	50.994	ENSMNEG00000031251	BLM	90	41.209	Macaca_nemestrina
ENSPNYG00000010956	blm	57	50.595	ENSMLEG00000032934	BLM	59	51.143	Mandrillus_leucophaeus
ENSPNYG00000010956	blm	99	64.718	ENSMAMG00000008726	blm	99	64.859	Mastacembelus_armatus
ENSPNYG00000010956	blm	100	88.239	ENSMZEG00005022323	blm	100	88.239	Maylandia_zebra
ENSPNYG00000010956	blm	57	51.056	ENSMAUG00000008953	Blm	59	51.358	Mesocricetus_auratus
ENSPNYG00000010956	blm	99	39.210	ENSMICG00000034442	BLM	59	51.176	Microcebus_murinus
ENSPNYG00000010956	blm	56	53.125	ENSMOCG00000016367	Blm	59	52.878	Microtus_ochrogaster
ENSPNYG00000010956	blm	100	65.710	ENSMMOG00000006959	blm	100	65.686	Mola_mola
ENSPNYG00000010956	blm	57	51.225	ENSMODG00000019449	BLM	58	51.116	Monodelphis_domestica
ENSPNYG00000010956	blm	100	66.574	ENSMALG00000007323	blm	100	66.852	Monopterus_albus
ENSPNYG00000010956	blm	57	51.878	MGP_CAROLIEiJ_G0029907	Blm	59	51.476	Mus_caroli
ENSPNYG00000010956	blm	57	52.113	ENSMUSG00000030528	Blm	59	51.361	Mus_musculus
ENSPNYG00000010956	blm	57	51.179	MGP_PahariEiJ_G0013129	Blm	59	51.174	Mus_pahari
ENSPNYG00000010956	blm	57	51.476	MGP_SPRETEiJ_G0031009	Blm	59	51.064	Mus_spretus
ENSPNYG00000010956	blm	87	51.054	ENSMLUG00000014697	BLM	88	51.054	Myotis_lucifugus
ENSPNYG00000010956	blm	56	50.597	ENSNGAG00000001275	Blm	59	50.594	Nannospalax_galili
ENSPNYG00000010956	blm	100	87.920	ENSNBRG00000019702	blm	100	87.920	Neolamprologus_brichardi
ENSPNYG00000010956	blm	72	44.636	ENSNLEG00000012087	BLM	80	51.092	Nomascus_leucogenys
ENSPNYG00000010956	blm	97	59.331	ENSMEUG00000007253	BLM	86	58.014	Notamacropus_eugenii
ENSPNYG00000010956	blm	57	47.312	ENSODEG00000015373	BLM	80	46.514	Octodon_degus
ENSPNYG00000010956	blm	100	83.900	ENSONIG00000015193	blm	100	84.178	Oreochromis_niloticus
ENSPNYG00000010956	blm	52	53.153	ENSOANG00000009316	-	100	52.753	Ornithorhynchus_anatinus
ENSPNYG00000010956	blm	57	50.835	ENSOCUG00000013969	BLM	99	38.431	Oryctolagus_cuniculus
ENSPNYG00000010956	blm	100	65.236	ENSORLG00000008110	blm	100	65.236	Oryzias_latipes
ENSPNYG00000010956	blm	100	65.115	ENSORLG00020004812	blm	100	65.186	Oryzias_latipes_hni
ENSPNYG00000010956	blm	100	65.401	ENSORLG00015018640	blm	88	85.310	Oryzias_latipes_hsok
ENSPNYG00000010956	blm	100	64.135	ENSOMEG00000023545	blm	100	64.346	Oryzias_melastigma
ENSPNYG00000010956	blm	57	49.763	ENSOGAG00000005708	BLM	59	49.526	Otolemur_garnettii
ENSPNYG00000010956	blm	57	51.425	ENSOARG00000012875	BLM	59	51.540	Ovis_aries
ENSPNYG00000010956	blm	57	51.761	ENSPPAG00000032173	BLM	59	51.882	Pan_paniscus
ENSPNYG00000010956	blm	53	53.216	ENSPPRG00000002471	BLM	84	53.216	Panthera_pardus
ENSPNYG00000010956	blm	53	52.585	ENSPTIG00000016168	BLM	84	52.585	Panthera_tigris_altaica
ENSPNYG00000010956	blm	57	51.176	ENSPTRG00000007460	BLM	59	51.647	Pan_troglodytes
ENSPNYG00000010956	blm	57	50.877	ENSPANG00000018572	BLM	90	41.209	Papio_anubis
ENSPNYG00000010956	blm	95	72.174	ENSPKIG00000008954	blm	92	71.777	Paramormyrops_kingsleyae
ENSPNYG00000010956	blm	64	79.532	ENSPMGG00000006629	blm	87	79.922	Periophthalmus_magnuspinnatus
ENSPNYG00000010956	blm	57	52.052	ENSPEMG00000017348	Blm	59	52.123	Peromyscus_maniculatus_bairdii
ENSPNYG00000010956	blm	80	42.551	ENSPCIG00000006609	BLM	100	38.958	Phascolarctos_cinereus
ENSPNYG00000010956	blm	100	60.293	ENSPFOG00000005059	blm	100	60.772	Poecilia_formosa
ENSPNYG00000010956	blm	100	60.659	ENSPLAG00000017344	blm	100	60.842	Poecilia_latipinna
ENSPNYG00000010956	blm	100	62.614	ENSPMEG00000000321	blm	100	62.500	Poecilia_mexicana
ENSPNYG00000010956	blm	100	63.528	ENSPREG00000007715	blm	100	63.649	Poecilia_reticulata
ENSPNYG00000010956	blm	57	50.293	ENSPPYG00000006784	BLM	88	50.709	Pongo_abelii
ENSPNYG00000010956	blm	57	49.465	ENSPCAG00000008960	BLM	59	49.057	Procavia_capensis
ENSPNYG00000010956	blm	99	48.415	ENSPCOG00000000439	BLM	57	48.239	Propithecus_coquereli
ENSPNYG00000010956	blm	71	54.258	ENSPVAG00000011642	BLM	69	54.722	Pteropus_vampyrus
ENSPNYG00000010956	blm	100	50.715	ENSPNAG00000011714	blm	100	50.647	Pygocentrus_nattereri
ENSPNYG00000010956	blm	99	39.676	ENSRNOG00000011213	Blm	88	51.472	Rattus_norvegicus
ENSPNYG00000010956	blm	72	44.413	ENSRBIG00000029656	BLM	90	42.308	Rhinopithecus_bieti
ENSPNYG00000010956	blm	57	51.246	ENSRROG00000037871	BLM	90	42.308	Rhinopithecus_roxellana
ENSPNYG00000010956	blm	63	44.578	ENSSBOG00000030957	BLM	55	51.654	Saimiri_boliviensis_boliviensis
ENSPNYG00000010956	blm	88	52.638	ENSSHAG00000007988	BLM	88	52.056	Sarcophilus_harrisii
ENSPNYG00000010956	blm	59	70.261	ENSSFOG00015015462	blm	79	70.087	Scleropages_formosus
ENSPNYG00000010956	blm	95	83.713	ENSSMAG00000001120	blm	91	84.588	Scophthalmus_maximus
ENSPNYG00000010956	blm	95	84.939	ENSSDUG00000010955	blm	91	85.639	Seriola_dumerili
ENSPNYG00000010956	blm	100	66.713	ENSSLDG00000000634	blm	100	66.923	Seriola_lalandi_dorsalis
ENSPNYG00000010956	blm	57	47.393	ENSSARG00000006398	BLM	63	46.682	Sorex_araneus
ENSPNYG00000010956	blm	77	45.227	ENSSPUG00000000013	BLM	96	44.545	Sphenodon_punctatus
ENSPNYG00000010956	blm	95	85.258	ENSSPAG00000013999	blm	91	87.389	Stegastes_partitus
ENSPNYG00000010956	blm	87	52.000	ENSSSCG00000001816	BLM	87	53.671	Sus_scrofa
ENSPNYG00000010956	blm	58	45.747	ENSTGUG00000009959	-	73	46.330	Taeniopygia_guttata
ENSPNYG00000010956	blm	99	61.408	ENSTRUG00000019860	blm	99	61.831	Takifugu_rubripes
ENSPNYG00000010956	blm	99	59.663	ENSTNIG00000019246	blm	99	59.212	Tetraodon_nigroviridis
ENSPNYG00000010956	blm	53	53.017	ENSTTRG00000016386	BLM	55	52.611	Tursiops_truncatus
ENSPNYG00000010956	blm	84	53.165	ENSUMAG00000009105	BLM	94	54.121	Ursus_maritimus
ENSPNYG00000010956	blm	72	43.018	ENSVPAG00000000085	BLM	100	37.219	Vicugna_pacos
ENSPNYG00000010956	blm	84	53.038	ENSVVUG00000006402	BLM	83	52.513	Vulpes_vulpes
ENSPNYG00000010956	blm	99	38.658	ENSXETG00000007847	blm	55	51.403	Xenopus_tropicalis
ENSPNYG00000010956	blm	100	64.606	ENSXCOG00000020227	blm	100	64.986	Xiphophorus_couchianus
ENSPNYG00000010956	blm	100	63.840	ENSXMAG00000002951	blm	100	63.930	Xiphophorus_maculatus