EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPNYG00000011504 (Gene tree)
Gene ID: -
Gene Symbol: tdp2b (1 of many)
Alias: tdp2|ttrap|ttrapl
Full Name: tyrosyl-DNA phosphodiesterase 2-like
Gene Type: protein_coding
Species: Pundamilia_nyererei
Status: putative
Strand: Minus strand
Length: 1998 bases
Position: chrJH419233.1:2490934-2492931
Accession: 102196892
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPNYP00000015194	Exo_endo_phos	PF03372.23	2e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPNYT00000015581	-	918	XM_005728441	ENSPNYP00000015194	305 (aa)	XP_005728498	-

Gene Model

Click here to download ENSPNYG00000011504's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPNYG00000011504's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPNYG00000011504	tdp2b	64	71.282	ENSPNYG00000001944	-	71	71.658
ENSPNYG00000011504	tdp2b	94	78.157	ENSPNYG00000011532	tdp2b	77	78.157

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPNYG00000011504	tdp2b	90	49.291	ENSG00000111802	TDP2	87	49.291	Homo_sapiens
ENSPNYG00000011504	tdp2b	90	61.091	ENSAPOG00000018379	-	91	61.091	Acanthochromis_polyacanthus
ENSPNYG00000011504	tdp2b	91	50.178	ENSAMEG00000010230	TDP2	94	50.178	Ailuropoda_melanoleuca
ENSPNYG00000011504	tdp2b	63	56.633	ENSAOCG00000010081	-	79	56.633	Amphiprion_ocellaris
ENSPNYG00000011504	tdp2b	90	58.633	ENSAPEG00000004208	-	94	58.633	Amphiprion_percula
ENSPNYG00000011504	tdp2b	96	55.405	ENSATEG00000010663	-	91	55.405	Anabas_testudineus
ENSPNYG00000011504	tdp2b	93	48.973	ENSACAG00000002332	TDP2	75	48.973	Anolis_carolinensis
ENSPNYG00000011504	tdp2b	94	48.639	ENSANAG00000020033	TDP2	76	48.639	Aotus_nancymaae
ENSPNYG00000011504	tdp2b	100	73.203	ENSACLG00000016174	tdp2b	94	73.203	Astatotilapia_calliptera
ENSPNYG00000011504	tdp2b	93	82.105	ENSACLG00000016148	tdp2b	96	82.105	Astatotilapia_calliptera
ENSPNYG00000011504	tdp2b	100	73.203	ENSACLG00000016132	tdp2b	94	73.203	Astatotilapia_calliptera
ENSPNYG00000011504	tdp2b	91	61.189	ENSAMXG00000011775	tdp2b	71	61.189	Astyanax_mexicanus
ENSPNYG00000011504	tdp2b	96	46.622	ENSAMXG00000036549	tdp2a	88	46.622	Astyanax_mexicanus
ENSPNYG00000011504	tdp2b	93	48.958	ENSBTAG00000000365	TDP2	74	48.958	Bos_taurus
ENSPNYG00000011504	tdp2b	94	48.980	ENSCJAG00000006074	TDP2	90	48.973	Callithrix_jacchus
ENSPNYG00000011504	tdp2b	94	48.299	ENSCJAG00000021963	-	76	48.299	Callithrix_jacchus
ENSPNYG00000011504	tdp2b	91	50.714	ENSCAFG00000010428	TDP2	90	50.534	Canis_familiaris
ENSPNYG00000011504	tdp2b	91	50.534	ENSCAFG00020009994	TDP2	90	50.534	Canis_lupus_dingo
ENSPNYG00000011504	tdp2b	93	49.306	ENSCHIG00000015294	-	91	49.306	Capra_hircus
ENSPNYG00000011504	tdp2b	97	46.512	ENSTSYG00000037199	TDP2	92	46.844	Carlito_syrichta
ENSPNYG00000011504	tdp2b	91	49.643	ENSCPOG00000006390	TDP2	73	49.643	Cavia_porcellus
ENSPNYG00000011504	tdp2b	94	48.299	ENSCCAG00000022734	TDP2	90	48.288	Cebus_capucinus
ENSPNYG00000011504	tdp2b	94	47.603	ENSCATG00000022076	TDP2	90	47.603	Cercocebus_atys
ENSPNYG00000011504	tdp2b	98	47.436	ENSCLAG00000002072	TDP2	82	47.436	Chinchilla_lanigera
ENSPNYG00000011504	tdp2b	93	47.766	ENSCSAG00000007769	TDP2	76	47.766	Chlorocebus_sabaeus
ENSPNYG00000011504	tdp2b	88	50.186	ENSCPBG00000006551	TDP2	64	50.186	Chrysemys_picta_bellii
ENSPNYG00000011504	tdp2b	94	47.260	ENSCANG00000040122	TDP2	90	47.260	Colobus_angolensis_palliatus
ENSPNYG00000011504	tdp2b	86	51.894	ENSCGRG00001000384	Tdp2	66	51.894	Cricetulus_griseus_chok1gshd
ENSPNYG00000011504	tdp2b	86	51.894	ENSCGRG00000010250	Tdp2	70	51.894	Cricetulus_griseus_crigri
ENSPNYG00000011504	tdp2b	94	67.014	ENSCVAG00000003114	tdp2b	74	67.014	Cyprinodon_variegatus
ENSPNYG00000011504	tdp2b	92	59.929	ENSDARG00000035954	tdp2b	69	59.929	Danio_rerio
ENSPNYG00000011504	tdp2b	86	49.242	ENSDARG00000069941	tdp2a	55	49.242	Danio_rerio
ENSPNYG00000011504	tdp2b	88	50.370	ENSDNOG00000044082	TDP2	69	50.370	Dasypus_novemcinctus
ENSPNYG00000011504	tdp2b	88	50.554	ENSETEG00000019096	TDP2	91	50.554	Echinops_telfairi
ENSPNYG00000011504	tdp2b	97	38.926	ENSEBUG00000006535	tdp2a	66	38.926	Eptatretus_burgeri
ENSPNYG00000011504	tdp2b	90	48.188	ENSEASG00005007656	TDP2	71	48.188	Equus_asinus_asinus
ENSPNYG00000011504	tdp2b	92	47.518	ENSECAG00000014264	TDP2	73	47.518	Equus_caballus
ENSPNYG00000011504	tdp2b	94	47.811	ENSEEUG00000010776	TDP2	78	47.811	Erinaceus_europaeus
ENSPNYG00000011504	tdp2b	97	46.078	ENSELUG00000009321	tdp2a	83	45.614	Esox_lucius
ENSPNYG00000011504	tdp2b	93	59.582	ENSELUG00000016449	tdp2b	71	59.582	Esox_lucius
ENSPNYG00000011504	tdp2b	91	50.714	ENSFCAG00000025612	TDP2	72	50.714	Felis_catus
ENSPNYG00000011504	tdp2b	93	48.780	ENSFALG00000004710	TDP2	81	47.573	Ficedula_albicollis
ENSPNYG00000011504	tdp2b	97	47.138	ENSFDAG00000006512	TDP2	96	47.138	Fukomys_damarensis
ENSPNYG00000011504	tdp2b	88	57.934	ENSFHEG00000013560	-	87	57.934	Fundulus_heteroclitus
ENSPNYG00000011504	tdp2b	94	48.621	ENSGALG00000013637	TDP2	75	48.475	Gallus_gallus
ENSPNYG00000011504	tdp2b	88	50.558	ENSGAGG00000002853	TDP2	64	50.558	Gopherus_agassizii
ENSPNYG00000011504	tdp2b	90	49.291	ENSGGOG00000014237	TDP2	87	49.291	Gorilla_gorilla
ENSPNYG00000011504	tdp2b	94	76.109	ENSHBUG00000002714	tdp2b	77	76.109	Haplochromis_burtoni
ENSPNYG00000011504	tdp2b	75	80.786	ENSHBUG00000005421	-	100	77.647	Haplochromis_burtoni
ENSPNYG00000011504	tdp2b	93	49.306	ENSHGLG00000008655	TDP2	76	49.306	Heterocephalus_glaber_female
ENSPNYG00000011504	tdp2b	93	49.306	ENSHGLG00100019087	TDP2	76	49.306	Heterocephalus_glaber_male
ENSPNYG00000011504	tdp2b	90	58.781	ENSIPUG00000013691	tdp2b	70	58.781	Ictalurus_punctatus
ENSPNYG00000011504	tdp2b	85	49.425	ENSJJAG00000021685	Tdp2	70	49.425	Jaculus_jaculus
ENSPNYG00000011504	tdp2b	92	58.865	ENSKMAG00000015485	-	86	58.865	Kryptolebias_marmoratus
ENSPNYG00000011504	tdp2b	99	46.053	ENSLACG00000008852	TDP2	78	46.053	Latimeria_chalumnae
ENSPNYG00000011504	tdp2b	94	52.397	ENSLOCG00000005817	tdp2b	98	52.397	Lepisosteus_oculatus
ENSPNYG00000011504	tdp2b	93	49.650	ENSLAFG00000002567	TDP2	76	49.650	Loxodonta_africana
ENSPNYG00000011504	tdp2b	94	47.603	ENSMFAG00000045296	TDP2	90	47.603	Macaca_fascicularis
ENSPNYG00000011504	tdp2b	93	47.766	ENSMMUG00000009803	TDP2	76	47.766	Macaca_mulatta
ENSPNYG00000011504	tdp2b	94	47.603	ENSMNEG00000038003	TDP2	90	47.603	Macaca_nemestrina
ENSPNYG00000011504	tdp2b	94	47.619	ENSMLEG00000028883	TDP2	90	47.603	Mandrillus_leucophaeus
ENSPNYG00000011504	tdp2b	97	64.094	ENSMAMG00000013654	tdp2b	79	64.094	Mastacembelus_armatus
ENSPNYG00000011504	tdp2b	92	70.671	ENSMZEG00005004103	tdp2b	90	70.671	Maylandia_zebra
ENSPNYG00000011504	tdp2b	100	79.677	ENSMZEG00005004077	tdp2b	100	79.677	Maylandia_zebra
ENSPNYG00000011504	tdp2b	87	72.180	ENSMZEG00005003980	-	78	72.180	Maylandia_zebra
ENSPNYG00000011504	tdp2b	94	72.355	ENSMZEG00005003950	tdp2b	77	72.355	Maylandia_zebra
ENSPNYG00000011504	tdp2b	93	76.761	ENSMZEG00005004126	tdp2b	92	76.761	Maylandia_zebra
ENSPNYG00000011504	tdp2b	88	73.978	ENSMZEG00005004055	tdp2b	84	73.978	Maylandia_zebra
ENSPNYG00000011504	tdp2b	96	91.525	ENSMZEG00005004153	tdp2b	99	91.525	Maylandia_zebra
ENSPNYG00000011504	tdp2b	96	48.814	ENSMGAG00000008014	TDP2	75	48.814	Meleagris_gallopavo
ENSPNYG00000011504	tdp2b	86	51.136	ENSMAUG00000014451	Tdp2	66	51.136	Mesocricetus_auratus
ENSPNYG00000011504	tdp2b	91	50.000	ENSMICG00000000039	TDP2	89	49.822	Microcebus_murinus
ENSPNYG00000011504	tdp2b	91	51.971	ENSMOCG00000002823	Tdp2	66	53.030	Microtus_ochrogaster
ENSPNYG00000011504	tdp2b	84	51.163	ENSMODG00000011653	TDP2	66	54.310	Monodelphis_domestica
ENSPNYG00000011504	tdp2b	86	59.623	ENSMALG00000005368	-	84	59.623	Monopterus_albus
ENSPNYG00000011504	tdp2b	96	50.847	MGP_CAROLIEiJ_G0018354	Tdp2	67	53.358	Mus_caroli
ENSPNYG00000011504	tdp2b	92	51.056	ENSMUSG00000035958	Tdp2	69	51.056	Mus_musculus
ENSPNYG00000011504	tdp2b	86	51.711	MGP_PahariEiJ_G0019417	Tdp2	66	51.711	Mus_pahari
ENSPNYG00000011504	tdp2b	92	51.056	MGP_SPRETEiJ_G0019220	Tdp2	69	51.056	Mus_spretus
ENSPNYG00000011504	tdp2b	91	51.429	ENSMPUG00000004516	TDP2	73	51.429	Mustela_putorius_furo
ENSPNYG00000011504	tdp2b	91	47.163	ENSMLUG00000013506	TDP2	73	47.163	Myotis_lucifugus
ENSPNYG00000011504	tdp2b	86	50.570	ENSNGAG00000001375	Tdp2	66	50.570	Nannospalax_galili
ENSPNYG00000011504	tdp2b	90	49.291	ENSNLEG00000002447	TDP2	84	49.291	Nomascus_leucogenys
ENSPNYG00000011504	tdp2b	99	47.812	ENSOPRG00000016299	TDP2	87	47.812	Ochotona_princeps
ENSPNYG00000011504	tdp2b	95	48.311	ENSODEG00000014018	TDP2	95	48.311	Octodon_degus
ENSPNYG00000011504	tdp2b	97	45.973	ENSOCUG00000013773	TDP2	78	45.973	Oryctolagus_cuniculus
ENSPNYG00000011504	tdp2b	93	55.594	ENSORLG00000001661	-	99	55.594	Oryzias_latipes
ENSPNYG00000011504	tdp2b	93	55.594	ENSORLG00020004634	-	99	55.594	Oryzias_latipes_hni
ENSPNYG00000011504	tdp2b	93	48.601	ENSORLG00015008190	-	98	48.601	Oryzias_latipes_hsok
ENSPNYG00000011504	tdp2b	89	55.839	ENSOMEG00000015899	-	93	55.597	Oryzias_melastigma
ENSPNYG00000011504	tdp2b	93	48.601	ENSOGAG00000025303	TDP2	72	48.601	Otolemur_garnettii
ENSPNYG00000011504	tdp2b	90	49.291	ENSPPAG00000029023	TDP2	87	49.291	Pan_paniscus
ENSPNYG00000011504	tdp2b	91	49.643	ENSPPRG00000015398	TDP2	72	49.643	Panthera_pardus
ENSPNYG00000011504	tdp2b	96	47.841	ENSPTIG00000018574	TDP2	97	47.841	Panthera_tigris_altaica
ENSPNYG00000011504	tdp2b	90	49.291	ENSPTRG00000017778	TDP2	87	49.291	Pan_troglodytes
ENSPNYG00000011504	tdp2b	89	49.270	ENSPANG00000017590	TDP2	90	47.945	Papio_anubis
ENSPNYG00000011504	tdp2b	95	60.274	ENSPKIG00000006483	tdp2b	74	60.274	Paramormyrops_kingsleyae
ENSPNYG00000011504	tdp2b	93	48.951	ENSPSIG00000004948	TDP2	92	48.951	Pelodiscus_sinensis
ENSPNYG00000011504	tdp2b	90	51.449	ENSPEMG00000001788	Tdp2	69	51.264	Peromyscus_maniculatus_bairdii
ENSPNYG00000011504	tdp2b	88	41.197	ENSPMAG00000001570	tdp2b	97	41.197	Petromyzon_marinus
ENSPNYG00000011504	tdp2b	95	49.832	ENSPCIG00000007316	TDP2	73	49.832	Phascolarctos_cinereus
ENSPNYG00000011504	tdp2b	92	52.297	ENSPFOG00000017990	-	96	52.113	Poecilia_formosa
ENSPNYG00000011504	tdp2b	91	53.047	ENSPLAG00000019439	-	83	53.047	Poecilia_latipinna
ENSPNYG00000011504	tdp2b	94	51.903	ENSPMEG00000010824	-	92	51.903	Poecilia_mexicana
ENSPNYG00000011504	tdp2b	90	48.936	ENSPPYG00000016282	TDP2	67	48.936	Pongo_abelii
ENSPNYG00000011504	tdp2b	95	48.136	ENSPCOG00000021415	TDP2	97	48.136	Propithecus_coquereli
ENSPNYG00000011504	tdp2b	86	54.717	ENSPNAG00000022162	tdp2a	63	54.717	Pygocentrus_nattereri
ENSPNYG00000011504	tdp2b	86	51.711	ENSRNOG00000018246	Tdp2	66	51.711	Rattus_norvegicus
ENSPNYG00000011504	tdp2b	94	47.260	ENSRBIG00000037119	TDP2	90	47.260	Rhinopithecus_bieti
ENSPNYG00000011504	tdp2b	94	47.603	ENSRROG00000005025	TDP2	90	47.603	Rhinopithecus_roxellana
ENSPNYG00000011504	tdp2b	94	47.959	ENSSBOG00000028734	TDP2	90	47.945	Saimiri_boliviensis_boliviensis
ENSPNYG00000011504	tdp2b	88	52.788	ENSSHAG00000002506	TDP2	67	52.788	Sarcophilus_harrisii
ENSPNYG00000011504	tdp2b	88	52.256	ENSSFOG00015011322	-	70	50.936	Scleropages_formosus
ENSPNYG00000011504	tdp2b	92	48.592	ENSSARG00000013547	TDP2	95	48.592	Sorex_araneus
ENSPNYG00000011504	tdp2b	99	44.737	ENSSPUG00000008288	TDP2	77	44.737	Sphenodon_punctatus
ENSPNYG00000011504	tdp2b	90	49.638	ENSSSCG00000001092	TDP2	71	49.638	Sus_scrofa
ENSPNYG00000011504	tdp2b	88	49.446	ENSTGUG00000009035	TDP2	97	49.446	Taeniopygia_guttata
ENSPNYG00000011504	tdp2b	93	54.007	ENSTRUG00000012218	-	94	54.007	Takifugu_rubripes
ENSPNYG00000011504	tdp2b	91	65.950	ENSTRUG00000014347	tdp2b	73	65.950	Takifugu_rubripes
ENSPNYG00000011504	tdp2b	90	59.783	ENSTNIG00000010260	TDP2	99	59.783	Tetraodon_nigroviridis
ENSPNYG00000011504	tdp2b	91	66.308	ENSTNIG00000017792	tdp2b	73	66.308	Tetraodon_nigroviridis
ENSPNYG00000011504	tdp2b	88	52.222	ENSTTRG00000016376	TDP2	72	51.071	Tursiops_truncatus
ENSPNYG00000011504	tdp2b	97	48.161	ENSUAMG00000025939	TDP2	81	48.161	Ursus_americanus
ENSPNYG00000011504	tdp2b	91	50.178	ENSUMAG00000020111	TDP2	88	50.178	Ursus_maritimus
ENSPNYG00000011504	tdp2b	92	50.177	ENSXETG00000014826	tdp2	70	50.177	Xenopus_tropicalis
ENSPNYG00000011504	tdp2b	86	56.015	ENSXCOG00000010778	-	69	56.015	Xiphophorus_couchianus
ENSPNYG00000011504	tdp2b	86	56.391	ENSXMAG00000022252	-	72	56.391	Xiphophorus_maculatus