EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPNYG00000011532 (Gene tree)
Gene ID: 102195294
Gene Symbol: tdp2b (1 of many)
Alias: tdp2|ttrap|ttrapl
Full Name: tyrosyl-DNA phosphodiesterase 2-like
Gene Type: protein_coding
Species: Pundamilia_nyererei
Status: putative
Strand: Minus strand
Length: 19904 bases
Position: chrJH419233.1:2502521-2522424
Accession: 102195294
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPNYP00000015217	Exo_endo_phos	PF03372.23	5.7e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPNYT00000015598	-	2127	-	ENSPNYP00000015210	361 (aa)	-	-
ENSPNYT00000015605	-	1224	-	ENSPNYP00000015217	361 (aa)	-	-
ENSPNYT00000015614	-	1396	XM_013909643	ENSPNYP00000015226	361 (aa)	XP_013765097	UPI0003AF421C

Gene Model

Click here to download ENSPNYG00000011532's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPNYG00000011532's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPNYG00000011532	tdp2b	77	78.157	ENSPNYG00000011504	tdp2b	94	78.157

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPNYG00000011532	tdp2b	95	52.738	ENSG00000111802	TDP2	93	52.738	Homo_sapiens
ENSPNYG00000011532	tdp2b	71	65.251	ENSAPOG00000018379	-	91	65.251	Acanthochromis_polyacanthus
ENSPNYG00000011532	tdp2b	73	56.391	ENSAMEG00000010230	TDP2	94	56.391	Ailuropoda_melanoleuca
ENSPNYG00000011532	tdp2b	73	64.259	ENSAPEG00000004208	-	94	64.259	Amphiprion_percula
ENSPNYG00000011532	tdp2b	84	60.518	ENSATEG00000010663	-	99	60.518	Anabas_testudineus
ENSPNYG00000011532	tdp2b	94	52.450	ENSACAG00000002332	TDP2	92	52.691	Anolis_carolinensis
ENSPNYG00000011532	tdp2b	95	55.043	ENSANAG00000020033	TDP2	96	53.591	Aotus_nancymaae
ENSPNYG00000011532	tdp2b	82	74.411	ENSACLG00000016174	tdp2b	99	74.411	Astatotilapia_calliptera
ENSPNYG00000011532	tdp2b	74	87.594	ENSACLG00000016148	tdp2b	95	87.594	Astatotilapia_calliptera
ENSPNYG00000011532	tdp2b	80	76.125	ENSACLG00000016132	tdp2b	96	76.125	Astatotilapia_calliptera
ENSPNYG00000011532	tdp2b	98	63.492	ENSAMXG00000011775	tdp2b	99	63.492	Astyanax_mexicanus
ENSPNYG00000011532	tdp2b	71	50.186	ENSAMXG00000036549	tdp2a	87	50.186	Astyanax_mexicanus
ENSPNYG00000011532	tdp2b	95	53.824	ENSBTAG00000000365	TDP2	93	53.824	Bos_taurus
ENSPNYG00000011532	tdp2b	99	53.151	ENSCJAG00000021963	-	96	53.151	Callithrix_jacchus
ENSPNYG00000011532	tdp2b	99	53.740	ENSCJAG00000006074	TDP2	96	53.740	Callithrix_jacchus
ENSPNYG00000011532	tdp2b	95	53.936	ENSCAFG00000010428	TDP2	98	53.936	Canis_familiaris
ENSPNYG00000011532	tdp2b	74	56.554	ENSCAFG00020009994	TDP2	91	56.554	Canis_lupus_dingo
ENSPNYG00000011532	tdp2b	78	54.064	ENSCHIG00000015294	-	90	56.180	Capra_hircus
ENSPNYG00000011532	tdp2b	86	51.603	ENSTSYG00000037199	TDP2	99	51.603	Carlito_syrichta
ENSPNYG00000011532	tdp2b	95	51.124	ENSCPOG00000006390	TDP2	94	51.676	Cavia_porcellus
ENSPNYG00000011532	tdp2b	99	53.740	ENSCCAG00000022734	TDP2	96	53.740	Cebus_capucinus
ENSPNYG00000011532	tdp2b	95	53.602	ENSCATG00000022076	TDP2	92	54.610	Cercocebus_atys
ENSPNYG00000011532	tdp2b	98	51.233	ENSCLAG00000002072	TDP2	98	51.233	Chinchilla_lanigera
ENSPNYG00000011532	tdp2b	99	52.342	ENSCSAG00000007769	TDP2	97	52.342	Chlorocebus_sabaeus
ENSPNYG00000011532	tdp2b	95	52.991	ENSCPBG00000006551	TDP2	86	52.991	Chrysemys_picta_bellii
ENSPNYG00000011532	tdp2b	95	52.738	ENSCANG00000040122	TDP2	97	51.240	Colobus_angolensis_palliatus
ENSPNYG00000011532	tdp2b	95	49.288	ENSCGRG00001000384	Tdp2	95	47.956	Cricetulus_griseus_chok1gshd
ENSPNYG00000011532	tdp2b	95	47.826	ENSCGRG00000010250	Tdp2	97	46.978	Cricetulus_griseus_crigri
ENSPNYG00000011532	tdp2b	99	76.111	ENSCVAG00000003114	tdp2b	99	76.111	Cyprinodon_variegatus
ENSPNYG00000011532	tdp2b	68	53.226	ENSDARG00000069941	tdp2a	55	53.226	Danio_rerio
ENSPNYG00000011532	tdp2b	96	62.973	ENSDARG00000035954	tdp2b	96	62.973	Danio_rerio
ENSPNYG00000011532	tdp2b	95	52.478	ENSDNOG00000044082	TDP2	92	52.478	Dasypus_novemcinctus
ENSPNYG00000011532	tdp2b	73	55.390	ENSETEG00000019096	TDP2	96	55.390	Echinops_telfairi
ENSPNYG00000011532	tdp2b	68	48.178	ENSEBUG00000006535	tdp2a	58	48.178	Eptatretus_burgeri
ENSPNYG00000011532	tdp2b	95	52.422	ENSEASG00005007656	TDP2	93	52.422	Equus_asinus_asinus
ENSPNYG00000011532	tdp2b	95	52.422	ENSECAG00000014264	TDP2	93	52.422	Equus_caballus
ENSPNYG00000011532	tdp2b	95	53.623	ENSEEUG00000010776	TDP2	93	54.179	Erinaceus_europaeus
ENSPNYG00000011532	tdp2b	73	50.000	ENSELUG00000009321	tdp2a	82	48.302	Esox_lucius
ENSPNYG00000011532	tdp2b	96	68.194	ENSELUG00000016449	tdp2b	97	68.194	Esox_lucius
ENSPNYG00000011532	tdp2b	95	54.131	ENSFCAG00000025612	TDP2	93	54.131	Felis_catus
ENSPNYG00000011532	tdp2b	96	48.295	ENSFALG00000004710	TDP2	96	47.368	Ficedula_albicollis
ENSPNYG00000011532	tdp2b	75	53.737	ENSFDAG00000006512	TDP2	96	53.737	Fukomys_damarensis
ENSPNYG00000011532	tdp2b	76	58.909	ENSFHEG00000013560	-	92	58.909	Fundulus_heteroclitus
ENSPNYG00000011532	tdp2b	95	50.712	ENSGALG00000013637	TDP2	94	50.278	Gallus_gallus
ENSPNYG00000011532	tdp2b	95	52.991	ENSGAGG00000002853	TDP2	86	52.991	Gopherus_agassizii
ENSPNYG00000011532	tdp2b	95	52.738	ENSGGOG00000014237	TDP2	92	53.901	Gorilla_gorilla
ENSPNYG00000011532	tdp2b	57	85.990	ENSHBUG00000005421	-	87	85.990	Haplochromis_burtoni
ENSPNYG00000011532	tdp2b	100	93.352	ENSHBUG00000002714	tdp2b	100	93.352	Haplochromis_burtoni
ENSPNYG00000011532	tdp2b	95	52.857	ENSHGLG00000008655	TDP2	94	52.857	Heterocephalus_glaber_female
ENSPNYG00000011532	tdp2b	95	52.857	ENSHGLG00100019087	TDP2	94	52.857	Heterocephalus_glaber_male
ENSPNYG00000011532	tdp2b	99	64.611	ENSIPUG00000013691	tdp2b	99	64.611	Ictalurus_punctatus
ENSPNYG00000011532	tdp2b	95	48.433	ENSJJAG00000021685	Tdp2	97	48.433	Jaculus_jaculus
ENSPNYG00000011532	tdp2b	72	64.368	ENSKMAG00000015485	-	83	64.368	Kryptolebias_marmoratus
ENSPNYG00000011532	tdp2b	96	54.039	ENSLACG00000008852	TDP2	95	54.039	Latimeria_chalumnae
ENSPNYG00000011532	tdp2b	75	62.590	ENSLOCG00000005817	tdp2b	99	62.590	Lepisosteus_oculatus
ENSPNYG00000011532	tdp2b	95	52.707	ENSLAFG00000002567	TDP2	95	52.707	Loxodonta_africana
ENSPNYG00000011532	tdp2b	95	53.602	ENSMFAG00000045296	TDP2	97	52.066	Macaca_fascicularis
ENSPNYG00000011532	tdp2b	95	53.602	ENSMMUG00000009803	TDP2	97	52.066	Macaca_mulatta
ENSPNYG00000011532	tdp2b	95	53.602	ENSMNEG00000038003	TDP2	97	52.066	Macaca_nemestrina
ENSPNYG00000011532	tdp2b	95	53.890	ENSMLEG00000028883	TDP2	94	53.890	Mandrillus_leucophaeus
ENSPNYG00000011532	tdp2b	99	74.373	ENSMAMG00000013654	tdp2b	99	74.373	Mastacembelus_armatus
ENSPNYG00000011532	tdp2b	77	82.671	ENSMZEG00005004153	tdp2b	96	82.671	Maylandia_zebra
ENSPNYG00000011532	tdp2b	72	77.395	ENSMZEG00005004055	tdp2b	87	77.395	Maylandia_zebra
ENSPNYG00000011532	tdp2b	75	86.989	ENSMZEG00005004077	tdp2b	91	86.989	Maylandia_zebra
ENSPNYG00000011532	tdp2b	74	75.188	ENSMZEG00005004103	tdp2b	89	75.188	Maylandia_zebra
ENSPNYG00000011532	tdp2b	100	92.798	ENSMZEG00005003950	tdp2b	100	92.798	Maylandia_zebra
ENSPNYG00000011532	tdp2b	69	77.108	ENSMZEG00005003980	-	80	77.108	Maylandia_zebra
ENSPNYG00000011532	tdp2b	82	75.421	ENSMZEG00005004126	tdp2b	99	75.421	Maylandia_zebra
ENSPNYG00000011532	tdp2b	95	51.282	ENSMGAG00000008014	TDP2	93	50.556	Meleagris_gallopavo
ENSPNYG00000011532	tdp2b	95	48.718	ENSMAUG00000014451	Tdp2	99	46.997	Mesocricetus_auratus
ENSPNYG00000011532	tdp2b	99	52.514	ENSMICG00000000039	TDP2	96	52.514	Microcebus_murinus
ENSPNYG00000011532	tdp2b	95	50.852	ENSMOCG00000002823	Tdp2	99	49.086	Microtus_ochrogaster
ENSPNYG00000011532	tdp2b	86	54.829	ENSMODG00000011653	TDP2	94	55.556	Monodelphis_domestica
ENSPNYG00000011532	tdp2b	81	57.627	ENSMALG00000005368	-	99	57.627	Monopterus_albus
ENSPNYG00000011532	tdp2b	94	50.286	MGP_CAROLIEiJ_G0018354	Tdp2	99	48.303	Mus_caroli
ENSPNYG00000011532	tdp2b	94	50.286	ENSMUSG00000035958	Tdp2	99	48.177	Mus_musculus
ENSPNYG00000011532	tdp2b	94	49.143	MGP_PahariEiJ_G0019417	Tdp2	99	47.258	Mus_pahari
ENSPNYG00000011532	tdp2b	98	48.774	MGP_SPRETEiJ_G0019220	Tdp2	94	48.774	Mus_spretus
ENSPNYG00000011532	tdp2b	95	53.276	ENSMPUG00000004516	TDP2	94	53.276	Mustela_putorius_furo
ENSPNYG00000011532	tdp2b	94	47.714	ENSMLUG00000013506	TDP2	93	48.571	Myotis_lucifugus
ENSPNYG00000011532	tdp2b	97	46.537	ENSNGAG00000001375	Tdp2	93	46.537	Nannospalax_galili
ENSPNYG00000011532	tdp2b	95	53.026	ENSNLEG00000002447	TDP2	95	53.026	Nomascus_leucogenys
ENSPNYG00000011532	tdp2b	95	53.824	ENSOPRG00000016299	TDP2	97	53.824	Ochotona_princeps
ENSPNYG00000011532	tdp2b	71	55.985	ENSODEG00000014018	TDP2	87	55.985	Octodon_degus
ENSPNYG00000011532	tdp2b	95	52.975	ENSOCUG00000013773	TDP2	93	52.975	Oryctolagus_cuniculus
ENSPNYG00000011532	tdp2b	74	59.630	ENSORLG00000001661	-	99	59.630	Oryzias_latipes
ENSPNYG00000011532	tdp2b	74	59.630	ENSORLG00020004634	-	99	59.630	Oryzias_latipes_hni
ENSPNYG00000011532	tdp2b	74	50.185	ENSORLG00015008190	-	99	50.185	Oryzias_latipes_hsok
ENSPNYG00000011532	tdp2b	71	59.144	ENSOMEG00000015899	-	93	58.730	Oryzias_melastigma
ENSPNYG00000011532	tdp2b	99	52.329	ENSOGAG00000025303	TDP2	93	52.762	Otolemur_garnettii
ENSPNYG00000011532	tdp2b	95	52.738	ENSPPAG00000029023	TDP2	93	53.901	Pan_paniscus
ENSPNYG00000011532	tdp2b	95	53.276	ENSPPRG00000015398	TDP2	93	53.276	Panthera_pardus
ENSPNYG00000011532	tdp2b	74	55.431	ENSPTIG00000018574	TDP2	91	55.431	Panthera_tigris_altaica
ENSPNYG00000011532	tdp2b	95	52.738	ENSPTRG00000017778	TDP2	92	53.901	Pan_troglodytes
ENSPNYG00000011532	tdp2b	95	53.644	ENSPANG00000017590	TDP2	97	52.316	Papio_anubis
ENSPNYG00000011532	tdp2b	96	66.017	ENSPKIG00000006483	tdp2b	96	66.017	Paramormyrops_kingsleyae
ENSPNYG00000011532	tdp2b	74	57.664	ENSPSIG00000004948	TDP2	94	57.664	Pelodiscus_sinensis
ENSPNYG00000011532	tdp2b	97	48.739	ENSPEMG00000001788	Tdp2	99	48.042	Peromyscus_maniculatus_bairdii
ENSPNYG00000011532	tdp2b	71	43.273	ENSPMAG00000001570	tdp2b	99	43.542	Petromyzon_marinus
ENSPNYG00000011532	tdp2b	95	53.276	ENSPCIG00000007316	TDP2	91	52.329	Phascolarctos_cinereus
ENSPNYG00000011532	tdp2b	73	56.654	ENSPFOG00000017990	-	95	56.654	Poecilia_formosa
ENSPNYG00000011532	tdp2b	73	56.274	ENSPLAG00000019439	-	83	56.274	Poecilia_latipinna
ENSPNYG00000011532	tdp2b	83	52.961	ENSPMEG00000010824	-	98	52.961	Poecilia_mexicana
ENSPNYG00000011532	tdp2b	95	52.450	ENSPPYG00000016282	TDP2	86	52.422	Pongo_abelii
ENSPNYG00000011532	tdp2b	95	53.314	ENSPCOG00000021415	TDP2	94	55.762	Propithecus_coquereli
ENSPNYG00000011532	tdp2b	69	57.028	ENSPNAG00000022162	tdp2a	63	57.028	Pygocentrus_nattereri
ENSPNYG00000011532	tdp2b	94	48.688	ENSRNOG00000018246	Tdp2	99	47.312	Rattus_norvegicus
ENSPNYG00000011532	tdp2b	95	53.026	ENSRBIG00000037119	TDP2	97	51.515	Rhinopithecus_bieti
ENSPNYG00000011532	tdp2b	95	53.314	ENSRROG00000005025	TDP2	92	54.610	Rhinopithecus_roxellana
ENSPNYG00000011532	tdp2b	99	52.941	ENSSBOG00000028734	TDP2	92	55.674	Saimiri_boliviensis_boliviensis
ENSPNYG00000011532	tdp2b	94	54.416	ENSSHAG00000002506	TDP2	90	54.416	Sarcophilus_harrisii
ENSPNYG00000011532	tdp2b	70	55.906	ENSSFOG00015011322	-	71	54.118	Scleropages_formosus
ENSPNYG00000011532	tdp2b	76	52.347	ENSSARG00000013547	TDP2	97	52.347	Sorex_araneus
ENSPNYG00000011532	tdp2b	95	50.425	ENSSPUG00000008288	TDP2	95	50.425	Sphenodon_punctatus
ENSPNYG00000011532	tdp2b	95	52.137	ENSSSCG00000001092	TDP2	93	52.137	Sus_scrofa
ENSPNYG00000011532	tdp2b	70	55.294	ENSTGUG00000009035	TDP2	97	55.294	Taeniopygia_guttata
ENSPNYG00000011532	tdp2b	73	57.196	ENSTRUG00000012218	-	94	57.196	Takifugu_rubripes
ENSPNYG00000011532	tdp2b	99	74.373	ENSTRUG00000014347	tdp2b	99	74.373	Takifugu_rubripes
ENSPNYG00000011532	tdp2b	99	74.722	ENSTNIG00000017792	tdp2b	99	74.722	Tetraodon_nigroviridis
ENSPNYG00000011532	tdp2b	71	60.536	ENSTNIG00000010260	TDP2	99	60.536	Tetraodon_nigroviridis
ENSPNYG00000011532	tdp2b	95	53.125	ENSTTRG00000016376	TDP2	93	53.977	Tursiops_truncatus
ENSPNYG00000011532	tdp2b	95	51.312	ENSUAMG00000025939	TDP2	94	51.312	Ursus_americanus
ENSPNYG00000011532	tdp2b	73	56.391	ENSUMAG00000020111	TDP2	88	56.391	Ursus_maritimus
ENSPNYG00000011532	tdp2b	94	55.114	ENSXETG00000014826	tdp2	93	55.114	Xenopus_tropicalis
ENSPNYG00000011532	tdp2b	69	60.000	ENSXCOG00000010778	-	69	60.000	Xiphophorus_couchianus
ENSPNYG00000011532	tdp2b	69	60.159	ENSXMAG00000022252	-	73	60.159	Xiphophorus_maculatus