EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPNYG00000011962 (Gene tree)
Gene ID: 102209990
Gene Symbol: casc3
Alias: -
Full Name: CASC3%2C exon junction complex subunit
Gene Type: protein_coding
Species: Pundamilia_nyererei
Status: putative
Strand: Minus strand
Length: 5119 bases
Position: chrJH419407.1:296345-301463
Accession: 102209990
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPNYP00000015792	Btz	PF09405.10	3.8e-20	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPNYT00000016193	-	2307	XM_005747679	ENSPNYP00000015792	762 (aa)	XP_005747736	UPI0003AFDE28

Gene Model

Click here to download ENSPNYG00000011962's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPNYG00000011962's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPNYG00000011962	casc3	80	54.098	ENSG00000108349	CASC3	68	66.883	Homo_sapiens
ENSPNYG00000011962	casc3	100	75.578	ENSAPOG00000008467	casc3	100	76.765	Acanthochromis_polyacanthus
ENSPNYG00000011962	casc3	85	95.294	ENSACIG00000000720	casc3	82	96.364	Amphilophus_citrinellus
ENSPNYG00000011962	casc3	100	76.714	ENSAOCG00000016676	casc3	100	77.649	Amphiprion_ocellaris
ENSPNYG00000011962	casc3	100	76.554	ENSAPEG00000006787	casc3	95	76.152	Amphiprion_percula
ENSPNYG00000011962	casc3	100	81.154	ENSATEG00000017196	casc3	100	80.769	Anabas_testudineus
ENSPNYG00000011962	casc3	77	53.465	ENSANAG00000034820	-	86	53.438	Aotus_nancymaae
ENSPNYG00000011962	casc3	52	63.462	ENSANAG00000031954	-	84	65.385	Aotus_nancymaae
ENSPNYG00000011962	casc3	100	99.606	ENSACLG00000016198	casc3	100	99.606	Astatotilapia_calliptera
ENSPNYG00000011962	casc3	81	54.574	ENSBTAG00000006250	CASC3	64	68.182	Bos_taurus
ENSPNYG00000011962	casc3	80	54.455	ENSCAFG00020018882	CASC3	81	54.517	Canis_lupus_dingo
ENSPNYG00000011962	casc3	72	53.770	ENSTSYG00000002975	CASC3	74	54.829	Carlito_syrichta
ENSPNYG00000011962	casc3	60	60.541	ENSCAPG00000010514	CASC3	75	68.831	Cavia_aperea
ENSPNYG00000011962	casc3	80	53.618	ENSCPOG00000015139	CASC3	83	55.975	Cavia_porcellus
ENSPNYG00000011962	casc3	78	50.464	ENSCPBG00000004750	CASC3	81	54.154	Chrysemys_picta_bellii
ENSPNYG00000011962	casc3	100	70.113	ENSCSEG00000010047	casc3	100	69.785	Cynoglossus_semilaevis
ENSPNYG00000011962	casc3	100	74.003	ENSCVAG00000014935	casc3	100	74.838	Cyprinodon_variegatus
ENSPNYG00000011962	casc3	81	36.677	ENSEBUG00000010654	casc3	76	38.983	Eptatretus_burgeri
ENSPNYG00000011962	casc3	80	55.016	ENSEASG00005002909	CASC3	82	55.247	Equus_asinus_asinus
ENSPNYG00000011962	casc3	100	57.856	ENSELUG00000015093	casc3	100	56.410	Esox_lucius
ENSPNYG00000011962	casc3	91	42.133	ENSFALG00000000412	CASC3	82	54.274	Ficedula_albicollis
ENSPNYG00000011962	casc3	100	73.187	ENSFHEG00000015793	casc3	100	73.127	Fundulus_heteroclitus
ENSPNYG00000011962	casc3	86	46.914	ENSGALG00000031813	CASC3	82	52.997	Gallus_gallus
ENSPNYG00000011962	casc3	98	75.750	ENSGAFG00000017148	casc3	86	75.714	Gambusia_affinis
ENSPNYG00000011962	casc3	63	68.000	ENSGAGG00000008432	CASC3	77	69.930	Gopherus_agassizii
ENSPNYG00000011962	casc3	100	99.869	ENSHBUG00000013155	casc3	100	99.869	Haplochromis_burtoni
ENSPNYG00000011962	casc3	72	54.194	ENSHGLG00100002268	CASC3	82	53.628	Heterocephalus_glaber_male
ENSPNYG00000011962	casc3	100	64.313	ENSHCOG00000002664	casc3	94	62.978	Hippocampus_comes
ENSPNYG00000011962	casc3	77	54.167	ENSJJAG00000023525	Casc3	82	54.259	Jaculus_jaculus
ENSPNYG00000011962	casc3	93	76.037	ENSKMAG00000019507	casc3	99	75.267	Kryptolebias_marmoratus
ENSPNYG00000011962	casc3	96	74.131	ENSLBEG00000005435	casc3	100	73.424	Labrus_bergylta
ENSPNYG00000011962	casc3	80	55.410	ENSMFAG00000041496	CASC3	82	55.901	Macaca_fascicularis
ENSPNYG00000011962	casc3	96	76.005	ENSMAMG00000005235	casc3	95	75.134	Mastacembelus_armatus
ENSPNYG00000011962	casc3	100	99.606	ENSMZEG00005003815	casc3	100	99.606	Maylandia_zebra
ENSPNYG00000011962	casc3	89	41.772	ENSMGAG00000013247	CASC3	82	53.304	Meleagris_gallopavo
ENSPNYG00000011962	casc3	100	70.972	ENSMMOG00000014339	casc3	100	70.694	Mola_mola
ENSPNYG00000011962	casc3	57	61.783	ENSMODG00000013044	CASC3	67	55.949	Monodelphis_domestica
ENSPNYG00000011962	casc3	62	98.000	ENSMALG00000019771	casc3	84	88.618	Monopterus_albus
ENSPNYG00000011962	casc3	80	54.605	ENSNLEG00000001598	CASC3	75	54.859	Nomascus_leucogenys
ENSPNYG00000011962	casc3	100	97.650	ENSONIG00000009337	casc3	100	97.650	Oreochromis_niloticus
ENSPNYG00000011962	casc3	100	67.266	ENSORLG00000023125	casc3	100	67.964	Oryzias_latipes
ENSPNYG00000011962	casc3	80	54.098	ENSPPAG00000035069	CASC3	74	55.205	Pan_paniscus
ENSPNYG00000011962	casc3	67	53.158	ENSPANG00000021708	CASC3	66	53.535	Papio_anubis
ENSPNYG00000011962	casc3	99	70.871	ENSPFOG00000017632	casc3	96	74.733	Poecilia_formosa
ENSPNYG00000011962	casc3	100	76.350	ENSPLAG00000005268	casc3	100	75.385	Poecilia_latipinna
ENSPNYG00000011962	casc3	56	79.532	ENSPMEG00000010299	casc3	68	88.889	Poecilia_mexicana
ENSPNYG00000011962	casc3	78	77.250	ENSPREG00000011856	casc3	91	76.066	Poecilia_reticulata
ENSPNYG00000011962	casc3	80	55.116	ENSPPYG00000008467	CASC3	75	56.698	Pongo_abelii
ENSPNYG00000011962	casc3	66	54.747	ENSRNOG00000009716	Casc3	80	56.051	Rattus_norvegicus
ENSPNYG00000011962	casc3	100	69.127	ENSSMAG00000016096	casc3	100	71.322	Scophthalmus_maximus
ENSPNYG00000011962	casc3	100	77.564	ENSSDUG00000016893	casc3	95	79.028	Seriola_dumerili
ENSPNYG00000011962	casc3	82	78.348	ENSSLDG00000020308	casc3	100	83.286	Seriola_lalandi_dorsalis
ENSPNYG00000011962	casc3	100	77.337	ENSSPAG00000023008	casc3	100	76.825	Stegastes_partitus
ENSPNYG00000011962	casc3	72	54.098	ENSSSCG00000017477	CASC3	71	68.874	Sus_scrofa
ENSPNYG00000011962	casc3	96	69.906	ENSTRUG00000000673	casc3	95	67.896	Takifugu_rubripes
ENSPNYG00000011962	casc3	100	63.342	ENSTNIG00000003208	casc3	53	70.241	Tetraodon_nigroviridis
ENSPNYG00000011962	casc3	78	54.369	ENSUAMG00000015116	CASC3	81	54.517	Ursus_americanus
ENSPNYG00000011962	casc3	60	58.824	ENSUMAG00000017697	CASC3	85	67.832	Ursus_maritimus
ENSPNYG00000011962	casc3	100	76.923	ENSXMAG00000013937	casc3	100	76.923	Xiphophorus_maculatus