EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPNYG00000012127 (Gene tree)
Gene ID: -
Gene Symbol: trnau1apb
Alias: secp43|trnau1ap|trnau1apl|trspap1|wu:fa56b07|wu:fc12c07|wu:fc69f09|zgc:113964|zgc:77884
Full Name: tRNA selenocysteine 1-associated protein 1-like
Gene Type: protein_coding
Species: Pundamilia_nyererei
Status: putative
Strand: Minus strand
Length: 7734 bases
Position: chrJH419282.1:2345895-2353628
Accession: 102208908
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPNYP00000016046	RRM_1	PF00076.22	2.9e-29	1	2
ENSPNYP00000016046	RRM_1	PF00076.22	2.9e-29	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPNYT00000016450	-	981	XM_013911988	ENSPNYP00000016046	326 (aa)	XP_013767442	-

Gene Model

Click here to download ENSPNYG00000012127's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPNYG00000012127's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPNYG00000012127	trnau1apb	98	45.588	ENSPNYG00000010130	trnau1apa	98	42.515
ENSPNYG00000012127	trnau1apb	55	30.055	ENSPNYG00000008384	tia1	64	30.055

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPNYG00000012127	trnau1apb	100	73.099	ENSAPOG00000010086	trnau1apb	100	73.607	Acanthochromis_polyacanthus
ENSPNYG00000012127	trnau1apb	100	91.718	ENSACIG00000001863	trnau1apb	100	91.718	Amphilophus_citrinellus
ENSPNYG00000012127	trnau1apb	100	81.633	ENSAOCG00000011891	trnau1apb	100	82.799	Amphiprion_ocellaris
ENSPNYG00000012127	trnau1apb	100	79.646	ENSAPEG00000008029	trnau1apb	100	83.481	Amphiprion_percula
ENSPNYG00000012127	trnau1apb	100	79.360	ENSATEG00000002196	trnau1apb	100	81.341	Anabas_testudineus
ENSPNYG00000012127	trnau1apb	100	97.239	ENSACLG00000003016	trnau1apb	100	97.239	Astatotilapia_calliptera
ENSPNYG00000012127	trnau1apb	99	62.462	ENSAMXG00000001805	trnau1apb	99	64.308	Astyanax_mexicanus
ENSPNYG00000012127	trnau1apb	99	76.163	ENSCSEG00000018215	trnau1apb	99	79.580	Cynoglossus_semilaevis
ENSPNYG00000012127	trnau1apb	95	73.273	ENSCVAG00000017866	trnau1apb	100	74.775	Cyprinodon_variegatus
ENSPNYG00000012127	trnau1apb	99	62.769	ENSDARG00000056475	trnau1apb	98	64.615	Danio_rerio
ENSPNYG00000012127	trnau1apb	100	60.542	ENSELUG00000016683	trnau1apb	99	63.554	Esox_lucius
ENSPNYG00000012127	trnau1apb	100	75.714	ENSFHEG00000001267	trnau1apb	100	77.778	Fundulus_heteroclitus
ENSPNYG00000012127	trnau1apb	100	69.501	ENSGMOG00000001160	trnau1apb	100	70.381	Gadus_morhua
ENSPNYG00000012127	trnau1apb	54	89.831	ENSGAFG00000006770	trnau1apb	100	72.393	Gambusia_affinis
ENSPNYG00000012127	trnau1apb	100	77.313	ENSGACG00000014944	trnau1apb	100	77.844	Gasterosteus_aculeatus
ENSPNYG00000012127	trnau1apb	70	40.693	ENSGAGG00000022384	-	78	41.558	Gopherus_agassizii
ENSPNYG00000012127	trnau1apb	100	87.427	ENSHBUG00000018944	trnau1apb	99	87.427	Haplochromis_burtoni
ENSPNYG00000012127	trnau1apb	70	79.039	ENSHCOG00000011350	trnau1apb	75	77.872	Hippocampus_comes
ENSPNYG00000012127	trnau1apb	99	58.951	ENSIPUG00000008843	tsp1l	99	64.220	Ictalurus_punctatus
ENSPNYG00000012127	trnau1apb	68	87.387	ENSKMAG00000010082	trnau1apb	99	77.971	Kryptolebias_marmoratus
ENSPNYG00000012127	trnau1apb	100	78.824	ENSLBEG00000020480	trnau1apb	100	80.531	Labrus_bergylta
ENSPNYG00000012127	trnau1apb	100	53.333	ENSLOCG00000013175	trnau1apb	99	53.474	Lepisosteus_oculatus
ENSPNYG00000012127	trnau1apb	100	80.466	ENSMAMG00000012192	trnau1apb	100	81.818	Mastacembelus_armatus
ENSPNYG00000012127	trnau1apb	100	87.427	ENSMZEG00005014852	trnau1apb	99	87.427	Maylandia_zebra
ENSPNYG00000012127	trnau1apb	70	39.394	ENSMGAG00000003234	-	99	40.693	Meleagris_gallopavo
ENSPNYG00000012127	trnau1apb	97	67.816	ENSMMOG00000021521	trnau1apb	100	69.364	Mola_mola
ENSPNYG00000012127	trnau1apb	99	70.920	ENSMALG00000003772	trnau1apb	100	74.847	Monopterus_albus
ENSPNYG00000012127	trnau1apb	97	94.637	ENSNBRG00000000751	trnau1apb	99	94.637	Neolamprologus_brichardi
ENSPNYG00000012127	trnau1apb	98	84.326	ENSONIG00000016639	trnau1apb	99	83.125	Oreochromis_niloticus
ENSPNYG00000012127	trnau1apb	68	85.268	ENSORLG00000013265	trnau1apb	99	75.504	Oryzias_latipes
ENSPNYG00000012127	trnau1apb	100	72.754	ENSORLG00020004464	trnau1apb	100	77.508	Oryzias_latipes_hni
ENSPNYG00000012127	trnau1apb	100	72.754	ENSORLG00015021098	trnau1apb	99	75.942	Oryzias_latipes_hsok
ENSPNYG00000012127	trnau1apb	68	84.821	ENSOMEG00000016531	trnau1apb	99	76.369	Oryzias_melastigma
ENSPNYG00000012127	trnau1apb	56	76.503	ENSPKIG00000007995	trnau1apb	99	59.877	Paramormyrops_kingsleyae
ENSPNYG00000012127	trnau1apb	70	43.290	ENSPSIG00000004189	-	78	43.290	Pelodiscus_sinensis
ENSPNYG00000012127	trnau1apb	99	63.529	ENSPMGG00000018509	trnau1apb	99	63.824	Periophthalmus_magnuspinnatus
ENSPNYG00000012127	trnau1apb	100	78.899	ENSPFOG00000003938	trnau1apb	100	78.899	Poecilia_formosa
ENSPNYG00000012127	trnau1apb	100	75.072	ENSPLAG00000015480	trnau1apb	99	75.358	Poecilia_latipinna
ENSPNYG00000012127	trnau1apb	100	75.072	ENSPMEG00000012743	trnau1apb	99	75.358	Poecilia_mexicana
ENSPNYG00000012127	trnau1apb	100	73.066	ENSPREG00000015035	trnau1apb	99	74.212	Poecilia_reticulata
ENSPNYG00000012127	trnau1apb	99	62.048	ENSPNAG00000019138	trnau1apb	98	60.417	Pygocentrus_nattereri
ENSPNYG00000012127	trnau1apb	99	57.357	ENSSFOG00015014158	trnau1apb	99	61.128	Scleropages_formosus
ENSPNYG00000012127	trnau1apb	99	75.367	ENSSMAG00000001745	trnau1apb	99	77.353	Scophthalmus_maximus
ENSPNYG00000012127	trnau1apb	99	79.592	ENSSDUG00000011109	trnau1apb	99	82.164	Seriola_dumerili
ENSPNYG00000012127	trnau1apb	99	79.710	ENSSLDG00000012947	trnau1apb	99	82.267	Seriola_lalandi_dorsalis
ENSPNYG00000012127	trnau1apb	69	33.725	ENSSPUG00000016701	-	90	34.050	Sphenodon_punctatus
ENSPNYG00000012127	trnau1apb	100	84.545	ENSSPAG00000006917	trnau1apb	100	84.894	Stegastes_partitus
ENSPNYG00000012127	trnau1apb	100	73.837	ENSTRUG00000008608	trnau1apb	99	75.000	Takifugu_rubripes
ENSPNYG00000012127	trnau1apb	98	71.875	ENSTNIG00000000916	trnau1apb	99	70.405	Tetraodon_nigroviridis
ENSPNYG00000012127	trnau1apb	94	69.301	ENSXCOG00000007974	trnau1apb	94	70.213	Xiphophorus_couchianus
ENSPNYG00000012127	trnau1apb	100	75.072	ENSXMAG00000029918	trnau1apb	99	75.931	Xiphophorus_maculatus