EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPNYG00000012299 (Gene tree)
Gene ID: -
Gene Symbol: smarca5
Alias: SWI/SNF related|matrix associated|actin dependent regulator of chromatin A5|chunp6878|fb26d12|fb49g04|im:7146484|wu:fb26d12|wu:fb49g04|zgc:158434
Full Name: SWI/SNF related%2C matrix associated%2C actin dependent regulator of chromatin%2C subfamily a%2C member 5
Gene Type: protein_coding
Species: Pundamilia_nyererei
Status: putative
Strand: Plus strand
Length: 6026 bases
Position: chrJH419227.1:2957058-2963083
Accession: 102195934
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPNYP00000016272	ResIII	PF04851.15	2.2e-11	1	1
ENSPNYP00000016272	DEAD	PF00270.29	1.5e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPNYT00000016679	-	1959	XM_013909254	ENSPNYP00000016272	652 (aa)	XP_013764708	-

Gene Model

Click here to download ENSPNYG00000012299's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPNYG00000012299's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPNYG00000012299	smarca5	60	47.101	ENSPNYG00000009100	hells	55	47.101

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPNYG00000012299	smarca5	92	82.933	ENSG00000102038	SMARCA1	56	84.384	Homo_sapiens
ENSPNYG00000012299	smarca5	92	98.417	ENSAPOG00000016035	smarca5	58	98.417	Acanthochromis_polyacanthus
ENSPNYG00000012299	smarca5	93	83.200	ENSAMEG00000015218	SMARCA1	56	84.384	Ailuropoda_melanoleuca
ENSPNYG00000012299	smarca5	78	100.000	ENSACIG00000016982	smarca5	57	100.000	Amphilophus_citrinellus
ENSPNYG00000012299	smarca5	92	98.417	ENSAOCG00000015578	smarca5	58	98.417	Amphiprion_ocellaris
ENSPNYG00000012299	smarca5	92	98.417	ENSAPEG00000011117	smarca5	58	98.417	Amphiprion_percula
ENSPNYG00000012299	smarca5	92	98.153	ENSATEG00000012894	smarca5	58	98.153	Anabas_testudineus
ENSPNYG00000012299	smarca5	90	86.849	ENSAPLG00000013149	SMARCA1	60	86.849	Anas_platyrhynchos
ENSPNYG00000012299	smarca5	91	86.757	ENSACAG00000011376	SMARCA1	56	87.671	Anolis_carolinensis
ENSPNYG00000012299	smarca5	92	78.933	ENSANAG00000023098	SMARCA1	55	80.274	Aotus_nancymaae
ENSPNYG00000012299	smarca5	93	100.000	ENSACLG00000025356	smarca5	58	100.000	Astatotilapia_calliptera
ENSPNYG00000012299	smarca5	91	94.495	ENSAMXG00000005709	smarca5	56	95.278	Astyanax_mexicanus
ENSPNYG00000012299	smarca5	82	87.342	ENSAMXG00000011227	smarca1	59	87.342	Astyanax_mexicanus
ENSPNYG00000012299	smarca5	91	83.514	ENSBTAG00000002292	SMARCA1	56	84.384	Bos_taurus
ENSPNYG00000012299	smarca5	95	63.755	WBGene00002169	isw-1	59	63.755	Caenorhabditis_elegans
ENSPNYG00000012299	smarca5	91	82.574	ENSCJAG00000002868	SMARCA1	55	84.384	Callithrix_jacchus
ENSPNYG00000012299	smarca5	91	82.320	ENSCAFG00000018673	SMARCA1	53	86.697	Canis_familiaris
ENSPNYG00000012299	smarca5	92	83.467	ENSCAFG00020001751	SMARCA1	55	84.658	Canis_lupus_dingo
ENSPNYG00000012299	smarca5	91	83.243	ENSCHIG00000009837	SMARCA1	56	84.110	Capra_hircus
ENSPNYG00000012299	smarca5	91	82.842	ENSTSYG00000004240	SMARCA1	59	83.469	Carlito_syrichta
ENSPNYG00000012299	smarca5	92	81.501	ENSCPOG00000013601	SMARCA1	79	81.724	Cavia_porcellus
ENSPNYG00000012299	smarca5	92	80.717	ENSCCAG00000030817	SMARCA1	55	80.717	Cebus_capucinus
ENSPNYG00000012299	smarca5	92	82.933	ENSCATG00000015921	SMARCA1	56	84.384	Cercocebus_atys
ENSPNYG00000012299	smarca5	92	82.133	ENSCLAG00000002171	SMARCA1	56	83.288	Chinchilla_lanigera
ENSPNYG00000012299	smarca5	92	82.933	ENSCSAG00000008460	SMARCA1	55	84.384	Chlorocebus_sabaeus
ENSPNYG00000012299	smarca5	91	86.486	ENSCPBG00000001146	SMARCA1	55	87.397	Chrysemys_picta_bellii
ENSPNYG00000012299	smarca5	92	73.423	ENSCING00000004110	swi/snf	59	73.684	Ciona_intestinalis
ENSPNYG00000012299	smarca5	91	72.072	ENSCSAVG00000004620	-	70	80.443	Ciona_savignyi
ENSPNYG00000012299	smarca5	92	83.200	ENSCANG00000007183	SMARCA1	55	84.658	Colobus_angolensis_palliatus
ENSPNYG00000012299	smarca5	92	82.133	ENSCGRG00001010776	Smarca1	56	83.288	Cricetulus_griseus_chok1gshd
ENSPNYG00000012299	smarca5	92	81.600	ENSCGRG00000015301	Smarca1	58	82.740	Cricetulus_griseus_crigri
ENSPNYG00000012299	smarca5	92	97.625	ENSCSEG00000000328	smarca5	58	97.625	Cynoglossus_semilaevis
ENSPNYG00000012299	smarca5	93	98.684	ENSCVAG00000008668	smarca5	58	98.684	Cyprinodon_variegatus
ENSPNYG00000012299	smarca5	92	93.119	ENSDARG00000052348	smarca5	57	94.278	Danio_rerio
ENSPNYG00000012299	smarca5	89	85.950	ENSDARG00000012776	smarca1	59	85.950	Danio_rerio
ENSPNYG00000012299	smarca5	91	83.467	ENSDNOG00000004315	SMARCA1	57	84.658	Dasypus_novemcinctus
ENSPNYG00000012299	smarca5	92	82.933	ENSDORG00000009270	Smarca1	56	84.110	Dipodomys_ordii
ENSPNYG00000012299	smarca5	91	76.018	FBgn0011604	Iswi	57	73.840	Drosophila_melanogaster
ENSPNYG00000012299	smarca5	89	81.644	ENSEBUG00000001239	smarca5	58	81.644	Eptatretus_burgeri
ENSPNYG00000012299	smarca5	92	80.717	ENSEASG00005008218	SMARCA1	60	82.192	Equus_asinus_asinus
ENSPNYG00000012299	smarca5	92	83.200	ENSECAG00000012106	SMARCA1	76	82.474	Equus_caballus
ENSPNYG00000012299	smarca5	80	84.106	ENSEEUG00000014927	SMARCA1	54	84.106	Erinaceus_europaeus
ENSPNYG00000012299	smarca5	89	86.704	ENSELUG00000010515	smarca1	62	86.704	Esox_lucius
ENSPNYG00000012299	smarca5	92	83.200	ENSFCAG00000018496	SMARCA1	56	84.384	Felis_catus
ENSPNYG00000012299	smarca5	88	86.761	ENSFALG00000000209	SMARCA1	62	86.761	Ficedula_albicollis
ENSPNYG00000012299	smarca5	92	82.400	ENSFDAG00000009818	SMARCA1	58	83.562	Fukomys_damarensis
ENSPNYG00000012299	smarca5	93	98.421	ENSFHEG00000007687	smarca5	58	98.421	Fundulus_heteroclitus
ENSPNYG00000012299	smarca5	91	85.676	ENSGALG00000008431	SMARCA1	58	86.849	Gallus_gallus
ENSPNYG00000012299	smarca5	93	98.947	ENSGAFG00000017731	smarca5	58	98.947	Gambusia_affinis
ENSPNYG00000012299	smarca5	88	88.169	ENSGAGG00000023575	SMARCA1	59	88.169	Gopherus_agassizii
ENSPNYG00000012299	smarca5	91	82.574	ENSGGOG00000012841	-	79	84.384	Gorilla_gorilla
ENSPNYG00000012299	smarca5	92	82.133	ENSHGLG00000003080	SMARCA1	56	83.288	Heterocephalus_glaber_female
ENSPNYG00000012299	smarca5	91	82.306	ENSHGLG00100001102	SMARCA1	94	79.412	Heterocephalus_glaber_male
ENSPNYG00000012299	smarca5	92	97.098	ENSHCOG00000005458	smarca5	58	97.098	Hippocampus_comes
ENSPNYG00000012299	smarca5	89	85.014	ENSIPUG00000016905	Smarca1	60	85.154	Ictalurus_punctatus
ENSPNYG00000012299	smarca5	92	93.578	ENSIPUG00000005229	SMARCA5	60	93.304	Ictalurus_punctatus
ENSPNYG00000012299	smarca5	91	83.378	ENSSTOG00000014524	SMARCA1	56	84.932	Ictidomys_tridecemlineatus
ENSPNYG00000012299	smarca5	92	82.667	ENSJJAG00000002593	Smarca1	56	83.836	Jaculus_jaculus
ENSPNYG00000012299	smarca5	93	98.158	ENSKMAG00000003777	smarca5	58	98.158	Kryptolebias_marmoratus
ENSPNYG00000012299	smarca5	92	96.330	ENSLBEG00000013295	SMARCA1	61	95.982	Labrus_bergylta
ENSPNYG00000012299	smarca5	92	96.330	ENSLBEG00000018112	smarca5	58	95.982	Labrus_bergylta
ENSPNYG00000012299	smarca5	88	88.301	ENSLACG00000016697	SMARCA1	58	88.301	Latimeria_chalumnae
ENSPNYG00000012299	smarca5	89	87.912	ENSLOCG00000014591	smarca1	58	87.912	Lepisosteus_oculatus
ENSPNYG00000012299	smarca5	90	82.011	ENSLAFG00000000896	SMARCA1	60	83.514	Loxodonta_africana
ENSPNYG00000012299	smarca5	92	82.933	ENSMFAG00000002117	SMARCA1	58	83.924	Macaca_fascicularis
ENSPNYG00000012299	smarca5	92	82.933	ENSMMUG00000008818	SMARCA1	61	84.488	Macaca_mulatta
ENSPNYG00000012299	smarca5	92	82.933	ENSMNEG00000041768	SMARCA1	58	83.924	Macaca_nemestrina
ENSPNYG00000012299	smarca5	92	82.933	ENSMLEG00000043198	SMARCA1	55	84.384	Mandrillus_leucophaeus
ENSPNYG00000012299	smarca5	92	97.906	ENSMAMG00000014294	smarca5	58	97.906	Mastacembelus_armatus
ENSPNYG00000012299	smarca5	93	100.000	ENSMZEG00005009369	smarca5	58	100.000	Maylandia_zebra
ENSPNYG00000012299	smarca5	91	85.676	ENSMGAG00000007042	SMARCA1	58	86.849	Meleagris_gallopavo
ENSPNYG00000012299	smarca5	92	82.133	ENSMAUG00000008133	Smarca1	56	83.288	Mesocricetus_auratus
ENSPNYG00000012299	smarca5	92	84.000	ENSMICG00000015768	SMARCA1	56	85.205	Microcebus_murinus
ENSPNYG00000012299	smarca5	92	82.133	ENSMOCG00000009464	Smarca1	56	83.288	Microtus_ochrogaster
ENSPNYG00000012299	smarca5	92	98.153	ENSMMOG00000005547	smarca5	62	98.153	Mola_mola
ENSPNYG00000012299	smarca5	89	86.630	ENSMODG00000013187	-	56	86.630	Monodelphis_domestica
ENSPNYG00000012299	smarca5	93	98.688	ENSMALG00000002081	smarca5	59	98.688	Monopterus_albus
ENSPNYG00000012299	smarca5	92	81.166	MGP_CAROLIEiJ_G0033034	Smarca1	75	83.934	Mus_caroli
ENSPNYG00000012299	smarca5	92	81.166	ENSMUSG00000031099	Smarca1	75	83.288	Mus_musculus
ENSPNYG00000012299	smarca5	92	81.166	MGP_PahariEiJ_G0031579	Smarca1	75	83.288	Mus_pahari
ENSPNYG00000012299	smarca5	92	81.166	MGP_SPRETEiJ_G0034192	Smarca1	75	83.288	Mus_spretus
ENSPNYG00000012299	smarca5	92	83.467	ENSMPUG00000017423	SMARCA1	52	84.658	Mustela_putorius_furo
ENSPNYG00000012299	smarca5	92	83.200	ENSMLUG00000029614	SMARCA1	55	84.384	Myotis_lucifugus
ENSPNYG00000012299	smarca5	92	82.400	ENSNGAG00000006492	Smarca1	56	83.562	Nannospalax_galili
ENSPNYG00000012299	smarca5	93	100.000	ENSNBRG00000004463	smarca5	61	100.000	Neolamprologus_brichardi
ENSPNYG00000012299	smarca5	92	81.333	ENSNLEG00000015179	SMARCA1	59	82.337	Nomascus_leucogenys
ENSPNYG00000012299	smarca5	89	87.187	ENSMEUG00000008819	SMARCA1	61	87.187	Notamacropus_eugenii
ENSPNYG00000012299	smarca5	91	82.038	ENSODEG00000012163	SMARCA1	56	83.562	Octodon_degus
ENSPNYG00000012299	smarca5	93	100.000	ENSONIG00000009993	smarca5	58	100.000	Oreochromis_niloticus
ENSPNYG00000012299	smarca5	88	87.887	ENSOANG00000002862	SMARCA1	59	87.887	Ornithorhynchus_anatinus
ENSPNYG00000012299	smarca5	91	83.514	ENSOCUG00000001047	SMARCA1	56	84.384	Oryctolagus_cuniculus
ENSPNYG00000012299	smarca5	92	97.625	ENSORLG00000021998	smarca5	58	97.625	Oryzias_latipes
ENSPNYG00000012299	smarca5	92	97.625	ENSORLG00020017679	smarca5	58	97.625	Oryzias_latipes_hni
ENSPNYG00000012299	smarca5	92	98.153	ENSORLG00015017210	smarca5	58	98.153	Oryzias_latipes_hsok
ENSPNYG00000012299	smarca5	92	98.417	ENSOMEG00000000086	smarca5	58	98.417	Oryzias_melastigma
ENSPNYG00000012299	smarca5	91	83.784	ENSOGAG00000004399	SMARCA1	56	84.658	Otolemur_garnettii
ENSPNYG00000012299	smarca5	91	83.243	ENSOARG00000014638	SMARCA1	59	84.765	Ovis_aries
ENSPNYG00000012299	smarca5	92	82.933	ENSPPAG00000034647	SMARCA1	55	84.384	Pan_paniscus
ENSPNYG00000012299	smarca5	92	83.467	ENSPPRG00000008929	SMARCA1	56	84.658	Panthera_pardus
ENSPNYG00000012299	smarca5	94	83.467	ENSPTIG00000000915	SMARCA1	58	84.658	Panthera_tigris_altaica
ENSPNYG00000012299	smarca5	92	82.933	ENSPTRG00000049876	SMARCA1	56	84.384	Pan_troglodytes
ENSPNYG00000012299	smarca5	92	82.933	ENSPANG00000003871	SMARCA1	55	84.384	Papio_anubis
ENSPNYG00000012299	smarca5	91	80.822	ENSPKIG00000013411	smarca1	58	83.569	Paramormyrops_kingsleyae
ENSPNYG00000012299	smarca5	93	86.486	ENSPSIG00000010101	SMARCA1	59	88.169	Pelodiscus_sinensis
ENSPNYG00000012299	smarca5	92	82.400	ENSPEMG00000017503	Smarca1	56	83.562	Peromyscus_maniculatus_bairdii
ENSPNYG00000012299	smarca5	89	87.465	ENSPCIG00000015460	SMARCA1	61	87.465	Phascolarctos_cinereus
ENSPNYG00000012299	smarca5	93	98.947	ENSPFOG00000007649	smarca5	58	98.947	Poecilia_formosa
ENSPNYG00000012299	smarca5	93	98.947	ENSPLAG00000003363	smarca5	58	98.947	Poecilia_latipinna
ENSPNYG00000012299	smarca5	93	99.211	ENSPMEG00000019849	smarca5	58	99.211	Poecilia_mexicana
ENSPNYG00000012299	smarca5	93	99.211	ENSPREG00000023250	smarca5	58	99.211	Poecilia_reticulata
ENSPNYG00000012299	smarca5	92	80.717	ENSPPYG00000020703	SMARCA1	55	80.717	Pongo_abelii
ENSPNYG00000012299	smarca5	88	81.166	ENSPCOG00000020722	SMARCA1	81	85.305	Propithecus_coquereli
ENSPNYG00000012299	smarca5	92	81.867	ENSRNOG00000003762	Smarca1	56	83.014	Rattus_norvegicus
ENSPNYG00000012299	smarca5	92	83.200	ENSRROG00000034167	SMARCA1	55	84.658	Rhinopithecus_roxellana
ENSPNYG00000012299	smarca5	92	82.667	ENSSBOG00000020641	SMARCA1	59	84.765	Saimiri_boliviensis_boliviensis
ENSPNYG00000012299	smarca5	87	81.106	ENSSHAG00000013518	SMARCA1	59	81.166	Sarcophilus_harrisii
ENSPNYG00000012299	smarca5	90	84.492	ENSSFOG00015009043	smarca1	58	85.831	Scleropages_formosus
ENSPNYG00000012299	smarca5	90	93.151	ENSSFOG00015016794	smarca5	60	93.803	Scleropages_formosus
ENSPNYG00000012299	smarca5	92	97.098	ENSSMAG00000004801	smarca5	58	97.098	Scophthalmus_maximus
ENSPNYG00000012299	smarca5	92	98.677	ENSSDUG00000020690	smarca5	58	98.677	Seriola_dumerili
ENSPNYG00000012299	smarca5	92	98.677	ENSSLDG00000025190	smarca5	58	98.677	Seriola_lalandi_dorsalis
ENSPNYG00000012299	smarca5	77	84.698	ENSSARG00000000842	SMARCA1	50	84.698	Sorex_araneus
ENSPNYG00000012299	smarca5	91	85.946	ENSSPUG00000000590	SMARCA1	57	86.849	Sphenodon_punctatus
ENSPNYG00000012299	smarca5	92	98.417	ENSSPAG00000002894	smarca5	58	98.417	Stegastes_partitus
ENSPNYG00000012299	smarca5	91	82.574	ENSSSCG00000012649	SMARCA1	56	84.110	Sus_scrofa
ENSPNYG00000012299	smarca5	90	86.027	ENSTGUG00000003899	-	60	86.027	Taeniopygia_guttata
ENSPNYG00000012299	smarca5	92	98.153	ENSTRUG00000014094	smarca5	58	98.153	Takifugu_rubripes
ENSPNYG00000012299	smarca5	92	96.789	ENSTNIG00000017717	smarca5	58	96.429	Tetraodon_nigroviridis
ENSPNYG00000012299	smarca5	80	81.818	ENSTBEG00000014973	SMARCA1	52	81.818	Tupaia_belangeri
ENSPNYG00000012299	smarca5	93	78.610	ENSTTRG00000006168	SMARCA1	60	80.886	Tursiops_truncatus
ENSPNYG00000012299	smarca5	92	83.200	ENSUAMG00000020201	SMARCA1	55	84.384	Ursus_americanus
ENSPNYG00000012299	smarca5	92	83.200	ENSUMAG00000004073	SMARCA1	86	84.384	Ursus_maritimus
ENSPNYG00000012299	smarca5	89	85.319	ENSVVUG00000008878	SMARCA1	61	85.319	Vulpes_vulpes
ENSPNYG00000012299	smarca5	91	86.216	ENSXETG00000001526	smarca1	59	87.123	Xenopus_tropicalis
ENSPNYG00000012299	smarca5	93	98.947	ENSXCOG00000011170	smarca5	60	98.947	Xiphophorus_couchianus
ENSPNYG00000012299	smarca5	93	98.947	ENSXMAG00000009678	smarca5	58	99.687	Xiphophorus_maculatus