EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPNYG00000012326 (Gene tree)
Gene ID: -
Gene Symbol: pcbp3
Alias: -
Full Name: poly(rC)-binding protein 3-like
Gene Type: protein_coding
Species: Pundamilia_nyererei
Status: putative
Strand: Minus strand
Length: 14668 bases
Position: chrJH419588.1:60840-75507
Accession: 102199060
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPNYP00000016298	KH_1	PF00013.29	2.5e-48	1	3
ENSPNYP00000016298	KH_1	PF00013.29	2.5e-48	2	3
ENSPNYP00000016298	KH_1	PF00013.29	2.5e-48	3	3
ENSPNYP00000016298	KH_2	PF07650.17	6.3e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPNYT00000016705	-	978	XM_005752808	ENSPNYP00000016298	325 (aa)	XP_005752865	-

Gene Model

Click here to download ENSPNYG00000012326's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPNYG00000012326's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPNYG00000012326	pcbp3	93	75.166	ENSPNYG00000014206	PCBP2	95	75.166
ENSPNYG00000012326	pcbp3	85	40.299	ENSPNYG00000015521	nova1	57	40.299
ENSPNYG00000012326	pcbp3	95	94.194	ENSPNYG00000013205	-	96	94.194
ENSPNYG00000012326	pcbp3	81	71.905	ENSPNYG00000004637	zgc:110045	95	71.905
ENSPNYG00000012326	pcbp3	93	75.908	ENSPNYG00000018792	pcbp2	95	75.908
ENSPNYG00000012326	pcbp3	93	58.896	ENSPNYG00000003098	-	71	58.896
ENSPNYG00000012326	pcbp3	74	55.556	ENSPNYG00000005907	hnrpkl	52	55.556
ENSPNYG00000012326	pcbp3	63	40.625	ENSPNYG00000001374	khsrp	53	40.625
ENSPNYG00000012326	pcbp3	74	53.968	ENSPNYG00000010838	hnrnpk	52	53.968
ENSPNYG00000012326	pcbp3	84	39.062	ENSPNYG00000009567	fubp3	73	39.062
ENSPNYG00000012326	pcbp3	64	34.722	ENSPNYG00000004552	fubp1	50	36.364
ENSPNYG00000012326	pcbp3	84	60.067	ENSPNYG00000019234	pcbp4	67	60.067

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPNYG00000012326	pcbp3	95	94.839	ENSAPOG00000016582	-	97	93.968	Acanthochromis_polyacanthus
ENSPNYG00000012326	pcbp3	98	95.298	ENSAPOG00000020003	pcbp3	89	95.298	Acanthochromis_polyacanthus
ENSPNYG00000012326	pcbp3	93	87.888	ENSAMEG00000001697	-	95	83.680	Ailuropoda_melanoleuca
ENSPNYG00000012326	pcbp3	95	93.060	ENSACIG00000002739	-	97	93.060	Amphilophus_citrinellus
ENSPNYG00000012326	pcbp3	95	91.291	ENSACIG00000010933	pcbp3	95	91.291	Amphilophus_citrinellus
ENSPNYG00000012326	pcbp3	96	97.115	ENSAOCG00000008592	-	98	97.115	Amphiprion_ocellaris
ENSPNYG00000012326	pcbp3	83	92.908	ENSAOCG00000007806	-	96	92.908	Amphiprion_ocellaris
ENSPNYG00000012326	pcbp3	95	95.161	ENSAPEG00000005209	-	97	95.161	Amphiprion_percula
ENSPNYG00000012326	pcbp3	95	89.851	ENSAPEG00000008011	pcbp3	95	89.851	Amphiprion_percula
ENSPNYG00000012326	pcbp3	95	90.390	ENSATEG00000015787	-	100	90.390	Anabas_testudineus
ENSPNYG00000012326	pcbp3	95	95.161	ENSATEG00000009833	-	97	95.161	Anabas_testudineus
ENSPNYG00000012326	pcbp3	93	89.274	ENSAPLG00000002975	-	95	89.274	Anas_platyrhynchos
ENSPNYG00000012326	pcbp3	94	74.011	ENSAPLG00000008951	-	79	74.011	Anas_platyrhynchos
ENSPNYG00000012326	pcbp3	93	82.081	ENSACAG00000004607	-	96	82.081	Anolis_carolinensis
ENSPNYG00000012326	pcbp3	93	80.675	ENSACAG00000009819	-	94	80.675	Anolis_carolinensis
ENSPNYG00000012326	pcbp3	91	77.328	ENSANAG00000030702	-	95	95.154	Aotus_nancymaae
ENSPNYG00000012326	pcbp3	95	90.149	ENSACLG00000011835	pcbp3	95	90.149	Astatotilapia_calliptera
ENSPNYG00000012326	pcbp3	95	94.194	ENSACLG00000003801	-	97	94.194	Astatotilapia_calliptera
ENSPNYG00000012326	pcbp3	94	67.169	ENSAMXG00000001760	zgc:110045	73	67.169	Astyanax_mexicanus
ENSPNYG00000012326	pcbp3	95	91.935	ENSAMXG00000013588	-	100	91.935	Astyanax_mexicanus
ENSPNYG00000012326	pcbp3	95	88.288	ENSAMXG00000003440	pcbp3	95	88.288	Astyanax_mexicanus
ENSPNYG00000012326	pcbp3	88	92.576	ENSCAFG00020019472	-	81	92.576	Canis_lupus_dingo
ENSPNYG00000012326	pcbp3	93	93.399	ENSCSAG00000007440	-	86	93.399	Chlorocebus_sabaeus
ENSPNYG00000012326	pcbp3	93	93.729	ENSCPBG00000012151	-	90	93.729	Chrysemys_picta_bellii
ENSPNYG00000012326	pcbp3	94	79.635	ENSCPBG00000000733	-	73	79.635	Chrysemys_picta_bellii
ENSPNYG00000012326	pcbp3	95	77.679	ENSCSEG00000016984	-	97	77.679	Cynoglossus_semilaevis
ENSPNYG00000012326	pcbp3	96	94.888	ENSCSEG00000000822	pcbp3	100	94.888	Cynoglossus_semilaevis
ENSPNYG00000012326	pcbp3	95	94.516	ENSCVAG00000005262	-	97	94.516	Cyprinodon_variegatus
ENSPNYG00000012326	pcbp3	95	89.552	ENSCVAG00000014482	pcbp3	95	89.552	Cyprinodon_variegatus
ENSPNYG00000012326	pcbp3	95	88.589	ENSDARG00000054378	pcbp3	97	88.589	Danio_rerio
ENSPNYG00000012326	pcbp3	93	81.518	ENSETEG00000015988	-	95	81.518	Echinops_telfairi
ENSPNYG00000012326	pcbp3	90	70.354	ENSEBUG00000005495	pcbp3	68	70.354	Eptatretus_burgeri
ENSPNYG00000012326	pcbp3	94	77.346	ENSEBUG00000007485	-	92	77.626	Eptatretus_burgeri
ENSPNYG00000012326	pcbp3	82	74.627	ENSEBUG00000016192	pcbp3	99	74.627	Eptatretus_burgeri
ENSPNYG00000012326	pcbp3	96	89.206	ENSELUG00000003521	pcbp3	97	89.206	Esox_lucius
ENSPNYG00000012326	pcbp3	95	94.516	ENSELUG00000001560	-	86	94.516	Esox_lucius
ENSPNYG00000012326	pcbp3	93	93.069	ENSFALG00000003949	-	95	93.069	Ficedula_albicollis
ENSPNYG00000012326	pcbp3	94	74.294	ENSFALG00000004411	-	75	74.294	Ficedula_albicollis
ENSPNYG00000012326	pcbp3	95	95.177	ENSFHEG00000006539	-	97	95.177	Fundulus_heteroclitus
ENSPNYG00000012326	pcbp3	96	96.474	ENSFHEG00000016615	pcbp3	96	96.474	Fundulus_heteroclitus
ENSPNYG00000012326	pcbp3	95	79.279	ENSGMOG00000011992	pcbp3	96	79.341	Gadus_morhua
ENSPNYG00000012326	pcbp3	95	70.091	ENSGMOG00000008611	-	100	70.091	Gadus_morhua
ENSPNYG00000012326	pcbp3	95	79.456	ENSGALG00000013155	-	99	79.456	Gallus_gallus
ENSPNYG00000012326	pcbp3	93	81.792	ENSGALG00000004394	-	98	88.587	Gallus_gallus
ENSPNYG00000012326	pcbp3	95	94.194	ENSGAFG00000010274	-	95	94.194	Gambusia_affinis
ENSPNYG00000012326	pcbp3	96	88.955	ENSGAFG00000011430	pcbp3	96	88.955	Gambusia_affinis
ENSPNYG00000012326	pcbp3	98	78.393	ENSGACG00000014955	-	99	78.393	Gasterosteus_aculeatus
ENSPNYG00000012326	pcbp3	96	87.349	ENSGACG00000002266	-	97	87.349	Gasterosteus_aculeatus
ENSPNYG00000012326	pcbp3	82	88.015	ENSGAGG00000000271	-	100	88.015	Gopherus_agassizii
ENSPNYG00000012326	pcbp3	75	87.368	ENSGAGG00000006956	-	76	87.368	Gopherus_agassizii
ENSPNYG00000012326	pcbp3	95	94.194	ENSHBUG00000021782	-	97	94.194	Haplochromis_burtoni
ENSPNYG00000012326	pcbp3	96	99.681	ENSHBUG00000010697	pcbp3	99	99.681	Haplochromis_burtoni
ENSPNYG00000012326	pcbp3	95	89.355	ENSHCOG00000006067	-	96	89.355	Hippocampus_comes
ENSPNYG00000012326	pcbp3	95	89.820	ENSHCOG00000017868	pcbp3	95	89.820	Hippocampus_comes
ENSPNYG00000012326	pcbp3	95	94.194	ENSIPUG00000006238	pcbp3	96	94.194	Ictalurus_punctatus
ENSPNYG00000012326	pcbp3	95	89.552	ENSKMAG00000003046	pcbp3	95	89.552	Kryptolebias_marmoratus
ENSPNYG00000012326	pcbp3	95	93.226	ENSKMAG00000018530	-	95	93.226	Kryptolebias_marmoratus
ENSPNYG00000012326	pcbp3	95	80.635	ENSLBEG00000006542	-	96	80.635	Labrus_bergylta
ENSPNYG00000012326	pcbp3	95	96.774	ENSLBEG00000006201	pcbp3	95	96.774	Labrus_bergylta
ENSPNYG00000012326	pcbp3	96	78.771	ENSLACG00000010386	pcbp3	76	78.771	Latimeria_chalumnae
ENSPNYG00000012326	pcbp3	94	74.359	ENSLACG00000010804	zgc:110045	74	74.359	Latimeria_chalumnae
ENSPNYG00000012326	pcbp3	93	87.926	ENSLOCG00000009369	pcbp3	95	87.926	Lepisosteus_oculatus
ENSPNYG00000012326	pcbp3	95	78.916	ENSLOCG00000005058	zgc:110045	81	78.916	Lepisosteus_oculatus
ENSPNYG00000012326	pcbp3	96	96.795	ENSMAMG00000022336	pcbp3	94	96.795	Mastacembelus_armatus
ENSPNYG00000012326	pcbp3	95	93.871	ENSMAMG00000011620	-	97	93.871	Mastacembelus_armatus
ENSPNYG00000012326	pcbp3	95	86.604	ENSMZEG00005014882	-	95	87.227	Maylandia_zebra
ENSPNYG00000012326	pcbp3	97	91.445	ENSMZEG00005008993	pcbp3	99	91.445	Maylandia_zebra
ENSPNYG00000012326	pcbp3	94	77.011	ENSMGAG00000001883	-	96	77.299	Meleagris_gallopavo
ENSPNYG00000012326	pcbp3	94	74.294	ENSMGAG00000006794	-	75	74.294	Meleagris_gallopavo
ENSPNYG00000012326	pcbp3	99	92.260	ENSMMOG00000000730	pcbp3	91	92.260	Mola_mola
ENSPNYG00000012326	pcbp3	95	94.194	ENSMMOG00000005216	-	96	94.194	Mola_mola
ENSPNYG00000012326	pcbp3	70	75.463	ENSMODG00000027884	-	94	75.463	Monodelphis_domestica
ENSPNYG00000012326	pcbp3	96	89.021	ENSMALG00000000691	pcbp3	98	87.662	Monopterus_albus
ENSPNYG00000012326	pcbp3	93	83.901	ENSMPUG00000001779	-	87	83.901	Mustela_putorius_furo
ENSPNYG00000012326	pcbp3	95	87.227	ENSNBRG00000016714	-	95	87.227	Neolamprologus_brichardi
ENSPNYG00000012326	pcbp3	95	90.390	ENSNBRG00000016409	-	95	90.390	Neolamprologus_brichardi
ENSPNYG00000012326	pcbp3	93	81.159	ENSOPRG00000003431	-	99	81.159	Ochotona_princeps
ENSPNYG00000012326	pcbp3	96	85.393	ENSONIG00000012122	-	98	85.393	Oreochromis_niloticus
ENSPNYG00000012326	pcbp3	95	94.194	ENSONIG00000004611	-	97	94.194	Oreochromis_niloticus
ENSPNYG00000012326	pcbp3	93	92.739	ENSOCUG00000002696	-	86	92.739	Oryctolagus_cuniculus
ENSPNYG00000012326	pcbp3	95	94.194	ENSORLG00000022739	-	97	94.194	Oryzias_latipes
ENSPNYG00000012326	pcbp3	95	97.097	ENSORLG00000000059	pcbp3	100	97.097	Oryzias_latipes
ENSPNYG00000012326	pcbp3	95	97.097	ENSORLG00020012671	pcbp3	97	97.097	Oryzias_latipes_hni
ENSPNYG00000012326	pcbp3	95	93.871	ENSORLG00020006124	-	97	93.871	Oryzias_latipes_hni
ENSPNYG00000012326	pcbp3	95	94.194	ENSORLG00015008051	-	95	94.194	Oryzias_latipes_hsok
ENSPNYG00000012326	pcbp3	95	97.097	ENSORLG00015000429	pcbp3	97	97.097	Oryzias_latipes_hsok
ENSPNYG00000012326	pcbp3	95	93.871	ENSOMEG00000020162	-	97	93.871	Oryzias_melastigma
ENSPNYG00000012326	pcbp3	85	99.639	ENSOMEG00000020811	pcbp3	96	99.639	Oryzias_melastigma
ENSPNYG00000012326	pcbp3	93	80.229	ENSOGAG00000008044	-	96	80.229	Otolemur_garnettii
ENSPNYG00000012326	pcbp3	76	83.684	ENSPKIG00000020913	-	82	83.684	Paramormyrops_kingsleyae
ENSPNYG00000012326	pcbp3	96	93.651	ENSPKIG00000019329	pcbp3	98	93.651	Paramormyrops_kingsleyae
ENSPNYG00000012326	pcbp3	93	79.688	ENSPSIG00000014970	-	95	80.312	Pelodiscus_sinensis
ENSPNYG00000012326	pcbp3	69	79.032	ENSPSIG00000008350	-	68	79.032	Pelodiscus_sinensis
ENSPNYG00000012326	pcbp3	96	88.988	ENSPMGG00000022383	pcbp3	96	88.988	Periophthalmus_magnuspinnatus
ENSPNYG00000012326	pcbp3	75	84.574	ENSPMAG00000004637	-	97	84.574	Petromyzon_marinus
ENSPNYG00000012326	pcbp3	94	71.845	ENSPMAG00000004551	pcbp3	88	71.845	Petromyzon_marinus
ENSPNYG00000012326	pcbp3	93	86.810	ENSPCIG00000028092	-	96	87.097	Phascolarctos_cinereus
ENSPNYG00000012326	pcbp3	94	90.596	ENSPLAG00000004074	-	89	90.596	Poecilia_latipinna
ENSPNYG00000012326	pcbp3	96	83.944	ENSPLAG00000011449	pcbp3	88	83.944	Poecilia_latipinna
ENSPNYG00000012326	pcbp3	96	87.421	ENSPMEG00000006653	-	96	87.613	Poecilia_mexicana
ENSPNYG00000012326	pcbp3	96	88.824	ENSPMEG00000021239	pcbp3	96	88.824	Poecilia_mexicana
ENSPNYG00000012326	pcbp3	95	94.194	ENSPREG00000020585	-	96	94.194	Poecilia_reticulata
ENSPNYG00000012326	pcbp3	96	95.223	ENSPREG00000015736	pcbp3	100	95.223	Poecilia_reticulata
ENSPNYG00000012326	pcbp3	95	92.532	ENSPNAG00000008541	-	98	92.532	Pygocentrus_nattereri
ENSPNYG00000012326	pcbp3	95	94.839	ENSPNAG00000015104	pcbp3	97	94.839	Pygocentrus_nattereri
ENSPNYG00000012326	pcbp3	93	93.399	ENSRNOG00000001245	Pcbp3	95	93.399	Rattus_norvegicus
ENSPNYG00000012326	pcbp3	93	84.127	ENSRBIG00000028177	-	87	84.127	Rhinopithecus_bieti
ENSPNYG00000012326	pcbp3	93	87.307	ENSSHAG00000007890	-	95	87.307	Sarcophilus_harrisii
ENSPNYG00000012326	pcbp3	95	94.516	ENSSFOG00015010205	pcbp3	95	94.516	Scleropages_formosus
ENSPNYG00000012326	pcbp3	95	87.087	ENSSFOG00015014706	pcbp3	95	87.087	Scleropages_formosus
ENSPNYG00000012326	pcbp3	93	84.488	ENSSFOG00015007118	-	93	84.488	Scleropages_formosus
ENSPNYG00000012326	pcbp3	96	97.106	ENSSMAG00000011929	pcbp3	98	97.106	Scophthalmus_maximus
ENSPNYG00000012326	pcbp3	95	94.194	ENSSMAG00000003135	-	97	94.194	Scophthalmus_maximus
ENSPNYG00000012326	pcbp3	95	90.735	ENSSDUG00000008502	-	95	90.735	Seriola_dumerili
ENSPNYG00000012326	pcbp3	96	89.583	ENSSDUG00000011608	pcbp3	99	89.583	Seriola_dumerili
ENSPNYG00000012326	pcbp3	95	94.839	ENSSLDG00000020161	-	95	94.839	Seriola_lalandi_dorsalis
ENSPNYG00000012326	pcbp3	96	89.583	ENSSLDG00000008518	pcbp3	99	89.583	Seriola_lalandi_dorsalis
ENSPNYG00000012326	pcbp3	94	74.857	ENSSPUG00000013214	-	90	82.587	Sphenodon_punctatus
ENSPNYG00000012326	pcbp3	83	92.908	ENSSPAG00000004190	-	96	92.908	Stegastes_partitus
ENSPNYG00000012326	pcbp3	95	79.279	ENSSPAG00000023341	-	95	79.279	Stegastes_partitus
ENSPNYG00000012326	pcbp3	93	83.636	ENSTGUG00000003316	-	95	83.636	Taeniopygia_guttata
ENSPNYG00000012326	pcbp3	93	86.799	ENSTGUG00000008158	-	95	86.799	Taeniopygia_guttata
ENSPNYG00000012326	pcbp3	95	93.498	ENSTRUG00000013604	pcbp3	95	93.498	Takifugu_rubripes
ENSPNYG00000012326	pcbp3	85	97.112	ENSTRUG00000006280	-	88	97.112	Takifugu_rubripes
ENSPNYG00000012326	pcbp3	93	80.636	ENSTTRG00000015075	-	96	80.636	Tursiops_truncatus
ENSPNYG00000012326	pcbp3	90	72.941	ENSXETG00000010491	pcbp2	75	72.941	Xenopus_tropicalis
ENSPNYG00000012326	pcbp3	93	86.687	ENSXETG00000011483	pcbp1	95	86.687	Xenopus_tropicalis
ENSPNYG00000012326	pcbp3	96	88.824	ENSXCOG00000020481	pcbp3	96	88.824	Xiphophorus_couchianus
ENSPNYG00000012326	pcbp3	95	94.516	ENSXMAG00000028711	-	95	94.516	Xiphophorus_maculatus
ENSPNYG00000012326	pcbp3	95	89.851	ENSXMAG00000008175	pcbp3	95	89.851	Xiphophorus_maculatus