EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPNYG00000012379 (Gene tree)
Gene ID: 102194118
Gene Symbol: -
Alias: im:7148349|si:ch211-125c5.1
Full Name: spen family transcriptional repressor
Gene Type: protein_coding
Species: Pundamilia_nyererei
Status: putative
Strand: Plus strand
Length: 25099 bases
Position: chrJH419244.1:2332641-2357739
Accession: 102194118
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPNYP00000016348	RRM_5	PF13893.6	4.9e-08	1	2
ENSPNYP00000016348	RRM_5	PF13893.6	4.9e-08	2	2
ENSPNYP00000016376	RRM_5	PF13893.6	5.1e-08	1	2
ENSPNYP00000016376	RRM_5	PF13893.6	5.1e-08	2	2
ENSPNYP00000016348	RRM_1	PF00076.22	2.8e-41	1	3
ENSPNYP00000016348	RRM_1	PF00076.22	2.8e-41	2	3
ENSPNYP00000016348	RRM_1	PF00076.22	2.8e-41	3	3
ENSPNYP00000016376	RRM_1	PF00076.22	3e-41	1	3
ENSPNYP00000016376	RRM_1	PF00076.22	3e-41	2	3
ENSPNYP00000016376	RRM_1	PF00076.22	3e-41	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPNYT00000016756	-	12604	-	ENSPNYP00000016348	3494 (aa)	-	-
ENSPNYT00000016784	-	12482	XM_005730755	ENSPNYP00000016376	3536 (aa)	XP_005730812	UPI0003AF4578

Gene Model

Click here to download ENSPNYG00000012379's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPNYG00000012379's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPNYG00000012379	-	95	84.024	ENSPNYG00000009042	si:ch1073-335m2.2	99	84.024

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPNYG00000012379	-	92	48.267	ENSG00000065526	SPEN	85	90.476	Homo_sapiens
ENSPNYG00000012379	-	97	78.919	ENSAPOG00000011411	si:ch1073-335m2.2	99	78.919	Acanthochromis_polyacanthus
ENSPNYG00000012379	-	100	84.834	ENSAPOG00000009853	-	100	84.830	Acanthochromis_polyacanthus
ENSPNYG00000012379	-	69	56.898	ENSAMEG00000011817	SPEN	96	80.337	Ailuropoda_melanoleuca
ENSPNYG00000012379	-	100	84.661	ENSAOCG00000014505	-	100	84.657	Amphiprion_ocellaris
ENSPNYG00000012379	-	100	84.637	ENSAPEG00000010288	-	100	84.633	Amphiprion_percula
ENSPNYG00000012379	-	95	76.562	ENSAPEG00000013515	si:ch1073-335m2.2	99	76.224	Amphiprion_percula
ENSPNYG00000012379	-	100	81.241	ENSATEG00000005627	-	100	81.241	Anabas_testudineus
ENSPNYG00000012379	-	97	78.919	ENSATEG00000007674	si:ch1073-335m2.2	99	78.919	Anabas_testudineus
ENSPNYG00000012379	-	99	46.918	ENSAPLG00000012618	SPEN	99	78.146	Anas_platyrhynchos
ENSPNYG00000012379	-	99	44.892	ENSANAG00000034428	SPEN	96	72.093	Aotus_nancymaae
ENSPNYG00000012379	-	95	84.024	ENSACLG00000021433	si:ch1073-335m2.2	99	84.024	Astatotilapia_calliptera
ENSPNYG00000012379	-	100	99.774	ENSACLG00000016922	-	100	99.774	Astatotilapia_calliptera
ENSPNYG00000012379	-	100	55.210	ENSAMXG00000012485	spen	100	55.467	Astyanax_mexicanus
ENSPNYG00000012379	-	99	45.827	ENSBTAG00000018729	SPEN	97	80.337	Bos_taurus
ENSPNYG00000012379	-	98	49.745	ENSCJAG00000008527	SPEN	96	81.461	Callithrix_jacchus
ENSPNYG00000012379	-	88	52.253	ENSCAFG00000016132	-	92	81.461	Canis_familiaris
ENSPNYG00000012379	-	99	45.568	ENSCHIG00000025070	SPEN	96	81.461	Capra_hircus
ENSPNYG00000012379	-	80	45.345	ENSTSYG00000036016	SPEN	86	46.462	Carlito_syrichta
ENSPNYG00000012379	-	93	75.120	ENSCAPG00000013803	SPEN	97	45.365	Cavia_aperea
ENSPNYG00000012379	-	93	75.120	ENSCPOG00000014036	SPEN	96	45.688	Cavia_porcellus
ENSPNYG00000012379	-	99	41.151	ENSCCAG00000020258	SPEN	86	81.461	Cebus_capucinus
ENSPNYG00000012379	-	78	87.407	ENSCATG00000015079	SPEN	94	81.461	Cercocebus_atys
ENSPNYG00000012379	-	84	67.206	ENSCLAG00000002018	SPEN	85	67.206	Chinchilla_lanigera
ENSPNYG00000012379	-	100	46.841	ENSCPBG00000010477	SPEN	99	81.461	Chrysemys_picta_bellii
ENSPNYG00000012379	-	90	46.809	ENSCANG00000034547	SPEN	91	72.093	Colobus_angolensis_palliatus
ENSPNYG00000012379	-	88	48.319	ENSCGRG00001007725	Spen	97	82.022	Cricetulus_griseus_chok1gshd
ENSPNYG00000012379	-	88	46.689	ENSCGRG00000010581	Spen	97	78.667	Cricetulus_griseus_crigri
ENSPNYG00000012379	-	99	76.765	ENSCSEG00000003915	-	100	76.765	Cynoglossus_semilaevis
ENSPNYG00000012379	-	100	75.457	ENSCVAG00000016346	-	100	75.429	Cyprinodon_variegatus
ENSPNYG00000012379	-	97	78.919	ENSCVAG00000009075	si:ch1073-335m2.2	99	78.919	Cyprinodon_variegatus
ENSPNYG00000012379	-	100	53.374	ENSDARG00000074245	spen	100	91.852	Danio_rerio
ENSPNYG00000012379	-	100	41.487	ENSDARG00000074332	si:ch1073-335m2.2	100	46.222	Danio_rerio
ENSPNYG00000012379	-	99	46.181	ENSDNOG00000041948	SPEN	86	82.022	Dasypus_novemcinctus
ENSPNYG00000012379	-	90	45.922	ENSDORG00000023909	Spen	96	77.241	Dipodomys_ordii
ENSPNYG00000012379	-	94	87.500	ENSEASG00005015911	SPEN	96	81.461	Equus_asinus_asinus
ENSPNYG00000012379	-	94	87.500	ENSECAG00000008833	SPEN	96	81.461	Equus_caballus
ENSPNYG00000012379	-	57	88.372	ENSEEUG00000010255	SPEN	58	88.372	Erinaceus_europaeus
ENSPNYG00000012379	-	97	82.778	ENSELUG00000007726	si:ch1073-335m2.2	98	82.778	Esox_lucius
ENSPNYG00000012379	-	87	45.099	ENSFALG00000003551	SPEN	100	44.840	Ficedula_albicollis
ENSPNYG00000012379	-	88	47.249	ENSFDAG00000010212	SPEN	88	46.988	Fukomys_damarensis
ENSPNYG00000012379	-	97	73.430	ENSFHEG00000004544	si:ch1073-335m2.2	99	73.430	Fundulus_heteroclitus
ENSPNYG00000012379	-	95	73.301	ENSGMOG00000008156	si:ch1073-335m2.2	98	73.301	Gadus_morhua
ENSPNYG00000012379	-	97	88.043	ENSGMOG00000008397	-	98	89.385	Gadus_morhua
ENSPNYG00000012379	-	100	47.882	ENSGALG00000036932	SPEN	99	81.461	Gallus_gallus
ENSPNYG00000012379	-	100	76.914	ENSGAFG00000015819	-	88	94.382	Gambusia_affinis
ENSPNYG00000012379	-	100	42.131	ENSGACG00000001176	si:ch1073-335m2.2	100	41.905	Gasterosteus_aculeatus
ENSPNYG00000012379	-	100	75.351	ENSGACG00000005341	-	100	75.322	Gasterosteus_aculeatus
ENSPNYG00000012379	-	100	48.068	ENSGAGG00000020785	SPEN	99	81.461	Gopherus_agassizii
ENSPNYG00000012379	-	89	49.106	ENSGGOG00000012041	SPEN	96	81.461	Gorilla_gorilla
ENSPNYG00000012379	-	92	84.024	ENSHBUG00000023253	si:ch1073-335m2.2	99	84.024	Haplochromis_burtoni
ENSPNYG00000012379	-	100	99.576	ENSHBUG00000020626	-	100	99.576	Haplochromis_burtoni
ENSPNYG00000012379	-	80	67.611	ENSHGLG00000019259	SPEN	81	67.611	Heterocephalus_glaber_female
ENSPNYG00000012379	-	68	67.611	ENSHGLG00100019294	SPEN	79	67.611	Heterocephalus_glaber_male
ENSPNYG00000012379	-	96	77.698	ENSHCOG00000006004	si:ch1073-335m2.2	99	77.698	Hippocampus_comes
ENSPNYG00000012379	-	96	41.858	ENSIPUG00000018212	si:ch1073-335m2.2	99	44.377	Ictalurus_punctatus
ENSPNYG00000012379	-	100	52.710	ENSIPUG00000021668	spen	100	52.897	Ictalurus_punctatus
ENSPNYG00000012379	-	88	67.339	ENSSTOG00000021428	SPEN	97	77.241	Ictidomys_tridecemlineatus
ENSPNYG00000012379	-	90	48.960	ENSJJAG00000010882	Spen	99	82.022	Jaculus_jaculus
ENSPNYG00000012379	-	100	77.962	ENSKMAG00000003882	-	100	77.990	Kryptolebias_marmoratus
ENSPNYG00000012379	-	84	75.458	ENSLBEG00000019129	-	100	75.325	Labrus_bergylta
ENSPNYG00000012379	-	97	81.065	ENSLBEG00000020855	si:ch1073-335m2.2	99	82.530	Labrus_bergylta
ENSPNYG00000012379	-	71	85.185	ENSLACG00000003258	SPEN	76	85.185	Latimeria_chalumnae
ENSPNYG00000012379	-	97	85.517	ENSLOCG00000007896	si:ch1073-335m2.2	97	85.517	Lepisosteus_oculatus
ENSPNYG00000012379	-	99	66.532	ENSLAFG00000004524	SPEN	94	77.778	Loxodonta_africana
ENSPNYG00000012379	-	84	67.339	ENSMFAG00000041974	SPEN	94	81.461	Macaca_fascicularis
ENSPNYG00000012379	-	84	67.339	ENSMMUG00000008026	SPEN	96	81.461	Macaca_mulatta
ENSPNYG00000012379	-	84	67.339	ENSMNEG00000042402	SPEN	83	81.461	Macaca_nemestrina
ENSPNYG00000012379	-	84	67.339	ENSMLEG00000039293	SPEN	94	70.225	Mandrillus_leucophaeus
ENSPNYG00000012379	-	97	78.378	ENSMAMG00000023870	si:ch1073-335m2.2	99	78.378	Mastacembelus_armatus
ENSPNYG00000012379	-	95	84.024	ENSMZEG00005011762	si:ch1073-335m2.2	99	84.024	Maylandia_zebra
ENSPNYG00000012379	-	89	99.620	ENSMZEG00005021491	-	99	99.620	Maylandia_zebra
ENSPNYG00000012379	-	92	47.523	ENSMAUG00000008318	Spen	91	81.461	Mesocricetus_auratus
ENSPNYG00000012379	-	92	47.465	ENSMOCG00000016083	Spen	97	81.461	Microtus_ochrogaster
ENSPNYG00000012379	-	93	75.000	ENSMMOG00000021742	si:ch1073-335m2.2	96	80.233	Mola_mola
ENSPNYG00000012379	-	100	45.739	ENSMODG00000003411	SPEN	100	44.905	Monodelphis_domestica
ENSPNYG00000012379	-	100	81.811	ENSMALG00000008625	-	100	81.783	Monopterus_albus
ENSPNYG00000012379	-	90	48.018	MGP_CAROLIEiJ_G0026745	Spen	97	80.899	Mus_caroli
ENSPNYG00000012379	-	90	47.716	ENSMUSG00000040761	Spen	97	81.461	Mus_musculus
ENSPNYG00000012379	-	99	44.530	MGP_PahariEiJ_G0029076	Spen	97	80.899	Mus_pahari
ENSPNYG00000012379	-	99	44.911	MGP_SPRETEiJ_G0027724	Spen	97	80.899	Mus_spretus
ENSPNYG00000012379	-	65	77.778	ENSMPUG00000016317	SPEN	65	71.818	Mustela_putorius_furo
ENSPNYG00000012379	-	93	86.022	ENSMLUG00000010144	SPEN	92	86.022	Myotis_lucifugus
ENSPNYG00000012379	-	91	63.265	ENSNGAG00000000641	Spen	96	81.461	Nannospalax_galili
ENSPNYG00000012379	-	85	99.086	ENSNBRG00000022090	-	100	99.065	Neolamprologus_brichardi
ENSPNYG00000012379	-	92	84.024	ENSNBRG00000005733	si:ch1073-335m2.2	99	84.024	Neolamprologus_brichardi
ENSPNYG00000012379	-	89	82.292	ENSMEUG00000002422	SPEN	89	82.292	Notamacropus_eugenii
ENSPNYG00000012379	-	85	64.791	ENSOPRG00000015800	SPEN	82	78.667	Ochotona_princeps
ENSPNYG00000012379	-	100	42.861	ENSODEG00000016644	SPEN	100	42.902	Octodon_degus
ENSPNYG00000012379	-	100	95.117	ENSONIG00000006573	-	100	95.117	Oreochromis_niloticus
ENSPNYG00000012379	-	69	52.227	ENSOCUG00000010840	SPEN	97	63.743	Oryctolagus_cuniculus
ENSPNYG00000012379	-	95	74.874	ENSORLG00000018414	si:ch1073-335m2.2	99	74.874	Oryzias_latipes
ENSPNYG00000012379	-	87	66.208	ENSORLG00000028894	-	100	66.143	Oryzias_latipes
ENSPNYG00000012379	-	87	66.774	ENSORLG00020007735	-	100	66.613	Oryzias_latipes_hni
ENSPNYG00000012379	-	95	74.874	ENSORLG00020009351	si:ch1073-335m2.2	75	74.874	Oryzias_latipes_hni
ENSPNYG00000012379	-	52	82.099	ENSORLG00015005537	si:ch1073-335m2.2	99	82.099	Oryzias_latipes_hsok
ENSPNYG00000012379	-	100	68.458	ENSORLG00015022085	-	100	68.374	Oryzias_latipes_hsok
ENSPNYG00000012379	-	96	82.822	ENSOMEG00000004509	si:ch1073-335m2.2	99	82.822	Oryzias_melastigma
ENSPNYG00000012379	-	100	68.486	ENSOMEG00000007639	-	100	68.205	Oryzias_melastigma
ENSPNYG00000012379	-	99	68.273	ENSOGAG00000025110	SPEN	94	81.461	Otolemur_garnettii
ENSPNYG00000012379	-	99	45.075	ENSOARG00000008477	SPEN	96	73.099	Ovis_aries
ENSPNYG00000012379	-	84	67.339	ENSPANG00000006293	SPEN	85	81.461	Papio_anubis
ENSPNYG00000012379	-	97	100.000	ENSPKIG00000010492	si:ch1073-335m2.2	100	100.000	Paramormyrops_kingsleyae
ENSPNYG00000012379	-	100	53.326	ENSPKIG00000002617	SPEN	90	63.548	Paramormyrops_kingsleyae
ENSPNYG00000012379	-	99	46.746	ENSPSIG00000008026	SPEN	99	78.146	Pelodiscus_sinensis
ENSPNYG00000012379	-	89	46.947	ENSPEMG00000022997	Spen	97	76.552	Peromyscus_maniculatus_bairdii
ENSPNYG00000012379	-	51	78.378	ENSPMEG00000002674	si:ch1073-335m2.2	98	78.378	Poecilia_mexicana
ENSPNYG00000012379	-	100	77.111	ENSPMEG00000006764	-	100	77.111	Poecilia_mexicana
ENSPNYG00000012379	-	100	77.055	ENSPREG00000010399	-	100	77.055	Poecilia_reticulata
ENSPNYG00000012379	-	89	48.898	ENSPPYG00000001834	SPEN	96	81.461	Pongo_abelii
ENSPNYG00000012379	-	88	65.323	ENSPCAG00000009543	SPEN	87	67.347	Procavia_capensis
ENSPNYG00000012379	-	74	65.587	ENSPVAG00000013794	SPEN	69	80.899	Pteropus_vampyrus
ENSPNYG00000012379	-	98	69.811	ENSPNAG00000011452	si:ch1073-335m2.2	100	69.811	Pygocentrus_nattereri
ENSPNYG00000012379	-	100	56.977	ENSPNAG00000020795	spen	87	70.927	Pygocentrus_nattereri
ENSPNYG00000012379	-	88	67.623	ENSRNOG00000033556	Spen	97	78.146	Rattus_norvegicus
ENSPNYG00000012379	-	88	67.339	ENSRBIG00000039654	SPEN	96	78.000	Rhinopithecus_bieti
ENSPNYG00000012379	-	87	67.339	ENSRROG00000035686	SPEN	94	77.778	Rhinopithecus_roxellana
ENSPNYG00000012379	-	99	45.423	ENSSHAG00000004960	SPEN	99	68.166	Sarcophilus_harrisii
ENSPNYG00000012379	-	100	54.486	ENSSFOG00015010267	si:ch1073-335m2.2	100	54.279	Scleropages_formosus
ENSPNYG00000012379	-	87	65.741	ENSSFOG00015007131	si:ch1073-335m2.2	100	54.811	Scleropages_formosus
ENSPNYG00000012379	-	100	81.141	ENSSMAG00000008996	-	100	81.141	Scophthalmus_maximus
ENSPNYG00000012379	-	73	70.270	ENSSMAG00000000125	si:ch1073-335m2.2	100	70.270	Scophthalmus_maximus
ENSPNYG00000012379	-	54	70.136	ENSSDUG00000008416	si:ch1073-335m2.2	53	70.136	Seriola_dumerili
ENSPNYG00000012379	-	100	84.129	ENSSDUG00000003476	-	97	98.000	Seriola_dumerili
ENSPNYG00000012379	-	100	83.923	ENSSLDG00000012950	-	97	98.000	Seriola_lalandi_dorsalis
ENSPNYG00000012379	-	92	69.683	ENSSLDG00000023347	si:ch1073-335m2.2	95	69.683	Seriola_lalandi_dorsalis
ENSPNYG00000012379	-	87	43.858	ENSSPUG00000001866	-	100	43.629	Sphenodon_punctatus
ENSPNYG00000012379	-	100	85.646	ENSSPAG00000006014	-	100	85.473	Stegastes_partitus
ENSPNYG00000012379	-	98	79.459	ENSSPAG00000012454	si:ch1073-335m2.2	100	79.459	Stegastes_partitus
ENSPNYG00000012379	-	77	49.156	ENSSSCG00000034484	SPEN	84	81.461	Sus_scrofa
ENSPNYG00000012379	-	100	74.902	ENSTRUG00000024350	-	100	74.642	Takifugu_rubripes
ENSPNYG00000012379	-	61	74.000	ENSTRUG00000021008	si:ch1073-335m2.2	99	74.000	Takifugu_rubripes
ENSPNYG00000012379	-	98	80.337	ENSTNIG00000014666	si:ch1073-335m2.2	93	80.337	Tetraodon_nigroviridis
ENSPNYG00000012379	-	97	85.779	ENSTNIG00000010907	-	100	85.892	Tetraodon_nigroviridis
ENSPNYG00000012379	-	68	80.423	ENSTBEG00000003628	SPEN	69	80.423	Tupaia_belangeri
ENSPNYG00000012379	-	72	80.423	ENSTTRG00000015704	SPEN	68	80.423	Tursiops_truncatus
ENSPNYG00000012379	-	67	78.283	ENSUAMG00000009600	SPEN	94	81.461	Ursus_americanus
ENSPNYG00000012379	-	66	78.283	ENSUMAG00000021641	SPEN	93	75.796	Ursus_maritimus
ENSPNYG00000012379	-	88	100.000	ENSVVUG00000028951	SPEN	93	100.000	Vulpes_vulpes
ENSPNYG00000012379	-	97	75.500	ENSXCOG00000004516	si:ch1073-335m2.2	99	75.500	Xiphophorus_couchianus
ENSPNYG00000012379	-	100	76.605	ENSXMAG00000021384	-	87	94.382	Xiphophorus_maculatus
ENSPNYG00000012379	-	97	78.378	ENSXMAG00000029887	si:ch1073-335m2.2	99	78.378	Xiphophorus_maculatus