EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPNYG00000012421 (Gene tree)
Gene ID: 102195117
Gene Symbol: rbm18
Alias: zgc:73332
Full Name: RNA binding motif protein 18
Gene Type: protein_coding
Species: Pundamilia_nyererei
Status: putative
Strand: Minus strand
Length: 17788 bases
Position: chrJH419268.1:2570553-2588340
Accession: 102195117
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPNYP00000016425	RRM_1	PF00076.22	1.4e-15	1	1
ENSPNYP00000016428	RRM_1	PF00076.22	1.7e-15	1	1
ENSPNYP00000016409	RRM_1	PF00076.22	1.9e-15	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPNYT00000016837	-	754	XM_005735331	ENSPNYP00000016428	184 (aa)	XP_005735388	UPI000329E616
ENSPNYT00000016817	-	1918	XM_005735328	ENSPNYP00000016409	200 (aa)	XP_005735385	UPI000329811F
ENSPNYT00000016834	-	537	-	ENSPNYP00000016425	178 (aa)	-	-

Gene Model

Click here to download ENSPNYG00000012421's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPNYG00000012421's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPNYG00000012421	rbm18	90	69.444	ENSG00000119446	RBM18	92	69.444	Homo_sapiens
ENSPNYG00000012421	rbm18	100	95.522	ENSAPOG00000001987	rbm18	100	95.522	Acanthochromis_polyacanthus
ENSPNYG00000012421	rbm18	90	68.889	ENSAMEG00000000772	RBM18	92	68.889	Ailuropoda_melanoleuca
ENSPNYG00000012421	rbm18	94	87.817	ENSACIG00000005001	rbm18	99	88.832	Amphilophus_citrinellus
ENSPNYG00000012421	rbm18	100	95.025	ENSAOCG00000006762	rbm18	100	95.025	Amphiprion_ocellaris
ENSPNYG00000012421	rbm18	100	95.025	ENSAPEG00000007972	rbm18	100	95.025	Amphiprion_percula
ENSPNYG00000012421	rbm18	100	92.537	ENSATEG00000019164	rbm18	100	92.537	Anabas_testudineus
ENSPNYG00000012421	rbm18	90	69.444	ENSANAG00000035441	RBM18	92	69.444	Aotus_nancymaae
ENSPNYG00000012421	rbm18	100	100.000	ENSACLG00000019848	rbm18	100	100.000	Astatotilapia_calliptera
ENSPNYG00000012421	rbm18	93	77.128	ENSAMXG00000035574	rbm18	96	77.128	Astyanax_mexicanus
ENSPNYG00000012421	rbm18	90	67.778	ENSBTAG00000016367	RBM18	92	67.778	Bos_taurus
ENSPNYG00000012421	rbm18	90	69.444	ENSCJAG00000046355	RBM18	92	69.444	Callithrix_jacchus
ENSPNYG00000012421	rbm18	90	68.889	ENSCAFG00000030041	RBM18	92	68.889	Canis_familiaris
ENSPNYG00000012421	rbm18	90	68.889	ENSCAFG00020015174	RBM18	92	68.889	Canis_lupus_dingo
ENSPNYG00000012421	rbm18	90	67.778	ENSCHIG00000026444	RBM18	92	67.778	Capra_hircus
ENSPNYG00000012421	rbm18	90	69.444	ENSTSYG00000030353	RBM18	92	69.444	Carlito_syrichta
ENSPNYG00000012421	rbm18	90	68.889	ENSCPOG00000038004	RBM18	92	68.889	Cavia_porcellus
ENSPNYG00000012421	rbm18	90	69.444	ENSCCAG00000035467	RBM18	92	69.444	Cebus_capucinus
ENSPNYG00000012421	rbm18	90	69.444	ENSCATG00000035634	RBM18	92	69.444	Cercocebus_atys
ENSPNYG00000012421	rbm18	90	69.444	ENSCLAG00000010773	RBM18	92	69.444	Chinchilla_lanigera
ENSPNYG00000012421	rbm18	57	82.178	ENSCSAG00000013373	RBM18	82	78.333	Chlorocebus_sabaeus
ENSPNYG00000012421	rbm18	76	68.874	ENSCHOG00000001341	RBM18	96	68.874	Choloepus_hoffmanni
ENSPNYG00000012421	rbm18	90	71.111	ENSCPBG00000009885	RBM18	91	71.111	Chrysemys_picta_bellii
ENSPNYG00000012421	rbm18	93	36.667	ENSCING00000010157	-	90	39.062	Ciona_intestinalis
ENSPNYG00000012421	rbm18	55	36.697	ENSCSAVG00000000409	-	80	36.697	Ciona_savignyi
ENSPNYG00000012421	rbm18	90	70.000	ENSCANG00000029590	RBM18	92	70.000	Colobus_angolensis_palliatus
ENSPNYG00000012421	rbm18	90	69.444	ENSCGRG00001014593	Rbm18	92	69.444	Cricetulus_griseus_chok1gshd
ENSPNYG00000012421	rbm18	83	70.909	ENSCGRG00000012247	Rbm18	90	70.909	Cricetulus_griseus_crigri
ENSPNYG00000012421	rbm18	100	89.552	ENSCSEG00000017587	rbm18	100	89.552	Cynoglossus_semilaevis
ENSPNYG00000012421	rbm18	100	94.030	ENSCVAG00000012436	rbm18	87	94.030	Cyprinodon_variegatus
ENSPNYG00000012421	rbm18	93	79.787	ENSDARG00000044255	rbm18	94	82.353	Danio_rerio
ENSPNYG00000012421	rbm18	90	68.889	ENSDNOG00000031658	RBM18	92	68.889	Dasypus_novemcinctus
ENSPNYG00000012421	rbm18	90	69.444	ENSDORG00000028540	Rbm18	92	69.444	Dipodomys_ordii
ENSPNYG00000012421	rbm18	88	35.912	FBgn0030571	CG14414	99	33.784	Drosophila_melanogaster
ENSPNYG00000012421	rbm18	91	61.714	ENSETEG00000009832	RBM18	92	61.714	Echinops_telfairi
ENSPNYG00000012421	rbm18	85	54.386	ENSEBUG00000009127	rbm18	87	54.386	Eptatretus_burgeri
ENSPNYG00000012421	rbm18	90	68.889	ENSEASG00005021084	RBM18	92	68.889	Equus_asinus_asinus
ENSPNYG00000012421	rbm18	90	68.889	ENSECAG00000024639	RBM18	92	68.889	Equus_caballus
ENSPNYG00000012421	rbm18	90	53.333	ENSEEUG00000002828	RBM18	92	53.333	Erinaceus_europaeus
ENSPNYG00000012421	rbm18	99	78.788	ENSELUG00000005876	rbm18	96	76.963	Esox_lucius
ENSPNYG00000012421	rbm18	90	68.889	ENSFCAG00000037774	RBM18	92	68.889	Felis_catus
ENSPNYG00000012421	rbm18	76	68.874	ENSFALG00000001940	RBM18	92	68.874	Ficedula_albicollis
ENSPNYG00000012421	rbm18	90	68.889	ENSFDAG00000012679	RBM18	92	68.889	Fukomys_damarensis
ENSPNYG00000012421	rbm18	99	94.472	ENSFHEG00000012457	rbm18	99	94.472	Fundulus_heteroclitus
ENSPNYG00000012421	rbm18	100	78.431	ENSGMOG00000019735	rbm18	100	78.431	Gadus_morhua
ENSPNYG00000012421	rbm18	92	68.852	ENSGALG00000028167	RBM18	94	68.852	Gallus_gallus
ENSPNYG00000012421	rbm18	100	94.527	ENSGAFG00000007767	rbm18	100	94.527	Gambusia_affinis
ENSPNYG00000012421	rbm18	100	90.050	ENSGACG00000017348	rbm18	99	90.050	Gasterosteus_aculeatus
ENSPNYG00000012421	rbm18	90	69.444	ENSGAGG00000018318	RBM18	91	69.444	Gopherus_agassizii
ENSPNYG00000012421	rbm18	90	69.444	ENSGGOG00000011052	RBM18	92	69.444	Gorilla_gorilla
ENSPNYG00000012421	rbm18	100	100.000	ENSHBUG00000015237	rbm18	100	100.000	Haplochromis_burtoni
ENSPNYG00000012421	rbm18	90	68.889	ENSHGLG00000011073	RBM18	92	68.889	Heterocephalus_glaber_female
ENSPNYG00000012421	rbm18	90	56.111	ENSHGLG00100006247	-	91	56.111	Heterocephalus_glaber_male
ENSPNYG00000012421	rbm18	90	68.889	ENSHGLG00100005536	RBM18	92	68.889	Heterocephalus_glaber_male
ENSPNYG00000012421	rbm18	100	89.552	ENSHCOG00000003148	rbm18	100	89.552	Hippocampus_comes
ENSPNYG00000012421	rbm18	100	71.287	ENSIPUG00000021512	rbm18	83	71.287	Ictalurus_punctatus
ENSPNYG00000012421	rbm18	90	69.444	ENSSTOG00000022388	-	92	69.444	Ictidomys_tridecemlineatus
ENSPNYG00000012421	rbm18	87	64.943	ENSSTOG00000032266	-	91	64.943	Ictidomys_tridecemlineatus
ENSPNYG00000012421	rbm18	90	66.667	ENSJJAG00000010974	-	92	66.667	Jaculus_jaculus
ENSPNYG00000012421	rbm18	57	82.178	ENSJJAG00000009581	-	75	78.333	Jaculus_jaculus
ENSPNYG00000012421	rbm18	100	95.522	ENSKMAG00000010679	rbm18	86	95.522	Kryptolebias_marmoratus
ENSPNYG00000012421	rbm18	100	92.040	ENSLBEG00000023896	rbm18	100	92.040	Labrus_bergylta
ENSPNYG00000012421	rbm18	68	74.453	ENSLACG00000009920	RBM18	99	74.453	Latimeria_chalumnae
ENSPNYG00000012421	rbm18	90	68.889	ENSLAFG00000012134	RBM18	92	68.889	Loxodonta_africana
ENSPNYG00000012421	rbm18	90	69.444	ENSMFAG00000000443	RBM18	92	69.444	Macaca_fascicularis
ENSPNYG00000012421	rbm18	90	69.444	ENSMMUG00000011455	RBM18	92	69.444	Macaca_mulatta
ENSPNYG00000012421	rbm18	90	69.444	ENSMNEG00000035374	RBM18	92	69.444	Macaca_nemestrina
ENSPNYG00000012421	rbm18	90	69.444	ENSMLEG00000043105	RBM18	92	69.444	Mandrillus_leucophaeus
ENSPNYG00000012421	rbm18	100	92.537	ENSMAMG00000009239	rbm18	100	92.537	Mastacembelus_armatus
ENSPNYG00000012421	rbm18	100	99.000	ENSMZEG00005017921	rbm18	100	99.000	Maylandia_zebra
ENSPNYG00000012421	rbm18	88	63.277	ENSMGAG00000016888	RBM18	97	63.277	Meleagris_gallopavo
ENSPNYG00000012421	rbm18	90	68.889	ENSMAUG00000021365	Rbm18	92	68.889	Mesocricetus_auratus
ENSPNYG00000012421	rbm18	90	70.000	ENSMICG00000046793	RBM18	92	70.000	Microcebus_murinus
ENSPNYG00000012421	rbm18	90	68.889	ENSMOCG00000000613	Rbm18	92	68.889	Microtus_ochrogaster
ENSPNYG00000012421	rbm18	99	81.579	ENSMMOG00000021319	rbm18	97	81.579	Mola_mola
ENSPNYG00000012421	rbm18	76	70.199	ENSMODG00000019688	RBM18	96	70.199	Monodelphis_domestica
ENSPNYG00000012421	rbm18	100	94.030	ENSMALG00000017766	rbm18	100	94.030	Monopterus_albus
ENSPNYG00000012421	rbm18	90	68.889	MGP_CAROLIEiJ_G0023488	Rbm18	92	68.889	Mus_caroli
ENSPNYG00000012421	rbm18	90	68.889	ENSMUSG00000026889	Rbm18	92	68.889	Mus_musculus
ENSPNYG00000012421	rbm18	90	68.333	MGP_PahariEiJ_G0024945	Rbm18	92	68.333	Mus_pahari
ENSPNYG00000012421	rbm18	90	68.889	MGP_SPRETEiJ_G0024405	Rbm18	92	68.889	Mus_spretus
ENSPNYG00000012421	rbm18	90	68.889	ENSMPUG00000007246	RBM18	92	68.889	Mustela_putorius_furo
ENSPNYG00000012421	rbm18	90	68.889	ENSMLUG00000013224	-	92	68.889	Myotis_lucifugus
ENSPNYG00000012421	rbm18	90	68.889	ENSMLUG00000004794	-	92	68.889	Myotis_lucifugus
ENSPNYG00000012421	rbm18	90	69.444	ENSNGAG00000000041	Rbm18	92	69.444	Nannospalax_galili
ENSPNYG00000012421	rbm18	100	100.000	ENSNBRG00000021128	rbm18	100	100.000	Neolamprologus_brichardi
ENSPNYG00000012421	rbm18	90	69.444	ENSNLEG00000017174	RBM18	92	69.444	Nomascus_leucogenys
ENSPNYG00000012421	rbm18	90	55.556	ENSMEUG00000015704	RBM18	93	55.556	Notamacropus_eugenii
ENSPNYG00000012421	rbm18	90	68.889	ENSOPRG00000010381	RBM18	92	68.889	Ochotona_princeps
ENSPNYG00000012421	rbm18	90	68.889	ENSODEG00000002055	RBM18	92	68.889	Octodon_degus
ENSPNYG00000012421	rbm18	100	99.000	ENSONIG00000003723	rbm18	100	99.000	Oreochromis_niloticus
ENSPNYG00000012421	rbm18	90	68.889	ENSOANG00000008200	RBM18	92	68.889	Ornithorhynchus_anatinus
ENSPNYG00000012421	rbm18	90	68.889	ENSOCUG00000008527	RBM18	92	68.889	Oryctolagus_cuniculus
ENSPNYG00000012421	rbm18	100	90.594	ENSORLG00000009962	rbm18	100	90.594	Oryzias_latipes
ENSPNYG00000012421	rbm18	100	90.594	ENSORLG00020013452	rbm18	100	90.594	Oryzias_latipes_hni
ENSPNYG00000012421	rbm18	100	90.594	ENSORLG00015001711	rbm18	97	86.598	Oryzias_latipes_hsok
ENSPNYG00000012421	rbm18	100	91.089	ENSOMEG00000001492	rbm18	100	91.089	Oryzias_melastigma
ENSPNYG00000012421	rbm18	90	69.444	ENSOGAG00000015104	RBM18	92	69.444	Otolemur_garnettii
ENSPNYG00000012421	rbm18	90	67.778	ENSOARG00000014228	RBM18	92	67.778	Ovis_aries
ENSPNYG00000012421	rbm18	90	69.444	ENSPPAG00000023355	RBM18	92	69.444	Pan_paniscus
ENSPNYG00000012421	rbm18	90	68.889	ENSPPRG00000011360	RBM18	92	68.889	Panthera_pardus
ENSPNYG00000012421	rbm18	90	68.889	ENSPTIG00000007126	RBM18	92	68.889	Panthera_tigris_altaica
ENSPNYG00000012421	rbm18	90	69.444	ENSPTRG00000021323	RBM18	92	69.444	Pan_troglodytes
ENSPNYG00000012421	rbm18	90	69.444	ENSPANG00000025845	RBM18	92	69.444	Papio_anubis
ENSPNYG00000012421	rbm18	90	61.850	ENSPKIG00000005430	rbm18	97	61.850	Paramormyrops_kingsleyae
ENSPNYG00000012421	rbm18	90	70.556	ENSPSIG00000013631	RBM18	92	70.556	Pelodiscus_sinensis
ENSPNYG00000012421	rbm18	98	84.184	ENSPMGG00000023951	rbm18	96	84.184	Periophthalmus_magnuspinnatus
ENSPNYG00000012421	rbm18	80	60.494	ENSPMAG00000000630	rbm18	94	60.494	Petromyzon_marinus
ENSPNYG00000012421	rbm18	90	70.556	ENSPCIG00000025526	RBM18	92	70.556	Phascolarctos_cinereus
ENSPNYG00000012421	rbm18	100	94.527	ENSPFOG00000019706	rbm18	100	94.527	Poecilia_formosa
ENSPNYG00000012421	rbm18	100	94.527	ENSPLAG00000005571	rbm18	100	94.527	Poecilia_latipinna
ENSPNYG00000012421	rbm18	100	94.527	ENSPMEG00000013977	rbm18	100	94.527	Poecilia_mexicana
ENSPNYG00000012421	rbm18	100	94.527	ENSPREG00000009157	rbm18	100	94.527	Poecilia_reticulata
ENSPNYG00000012421	rbm18	90	69.444	ENSPPYG00000019569	RBM18	92	69.444	Pongo_abelii
ENSPNYG00000012421	rbm18	61	78.704	ENSPCAG00000011245	RBM18	88	78.333	Procavia_capensis
ENSPNYG00000012421	rbm18	90	69.444	ENSPCOG00000024474	RBM18	92	69.444	Propithecus_coquereli
ENSPNYG00000012421	rbm18	90	68.889	ENSPVAG00000000863	RBM18	92	68.889	Pteropus_vampyrus
ENSPNYG00000012421	rbm18	93	77.660	ENSPNAG00000017660	rbm18	96	77.660	Pygocentrus_nattereri
ENSPNYG00000012421	rbm18	90	67.778	ENSRNOG00000006763	Rbm18	92	67.778	Rattus_norvegicus
ENSPNYG00000012421	rbm18	90	70.000	ENSRBIG00000040177	RBM18	92	70.000	Rhinopithecus_bieti
ENSPNYG00000012421	rbm18	90	70.000	ENSRROG00000031364	RBM18	92	70.000	Rhinopithecus_roxellana
ENSPNYG00000012421	rbm18	90	69.444	ENSSBOG00000024806	RBM18	92	69.444	Saimiri_boliviensis_boliviensis
ENSPNYG00000012421	rbm18	90	70.556	ENSSHAG00000012257	RBM18	92	70.556	Sarcophilus_harrisii
ENSPNYG00000012421	rbm18	100	76.500	ENSSFOG00015001100	rbm18	100	76.500	Scleropages_formosus
ENSPNYG00000012421	rbm18	100	91.542	ENSSMAG00000020138	rbm18	100	91.542	Scophthalmus_maximus
ENSPNYG00000012421	rbm18	100	94.030	ENSSDUG00000016203	rbm18	98	94.030	Seriola_dumerili
ENSPNYG00000012421	rbm18	100	94.030	ENSSLDG00000016329	rbm18	100	94.030	Seriola_lalandi_dorsalis
ENSPNYG00000012421	rbm18	76	68.212	ENSSPUG00000001601	RBM18	84	68.212	Sphenodon_punctatus
ENSPNYG00000012421	rbm18	100	95.025	ENSSPAG00000005394	rbm18	100	95.025	Stegastes_partitus
ENSPNYG00000012421	rbm18	90	67.778	ENSSSCG00000030089	RBM18	92	67.778	Sus_scrofa
ENSPNYG00000012421	rbm18	76	68.212	ENSTGUG00000006802	RBM18	95	68.212	Taeniopygia_guttata
ENSPNYG00000012421	rbm18	100	85.572	ENSTRUG00000005812	rbm18	100	85.572	Takifugu_rubripes
ENSPNYG00000012421	rbm18	97	87.565	ENSTNIG00000009141	rbm18	99	87.565	Tetraodon_nigroviridis
ENSPNYG00000012421	rbm18	76	69.536	ENSTBEG00000016520	RBM18	96	69.536	Tupaia_belangeri
ENSPNYG00000012421	rbm18	90	68.889	ENSUAMG00000014431	RBM18	92	68.889	Ursus_americanus
ENSPNYG00000012421	rbm18	90	68.889	ENSUMAG00000003445	RBM18	92	68.889	Ursus_maritimus
ENSPNYG00000012421	rbm18	90	68.889	ENSVPAG00000008618	RBM18	92	68.889	Vicugna_pacos
ENSPNYG00000012421	rbm18	90	68.889	ENSVVUG00000009442	RBM18	92	68.889	Vulpes_vulpes
ENSPNYG00000012421	rbm18	91	64.740	ENSXETG00000016328	rbm18	92	65.000	Xenopus_tropicalis
ENSPNYG00000012421	rbm18	100	95.522	ENSXMAG00000003538	rbm18	100	95.522	Xiphophorus_maculatus