EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPNYG00000012547 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Pundamilia_nyererei
Status: putative
Strand: Minus strand
Length: 3234 bases
Position: chrJH419427.1:954497-957730
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPNYP00000016564	RVT_1	PF00078.27	6.6e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPNYT00000016974	-	912	-	ENSPNYP00000016564	303 (aa)	-	-

Gene Model

Click here to download ENSPNYG00000012547's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPNYG00000012547's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPNYG00000012547	-	93	33.333	ENSPNYG00000012978	-	86	33.333
ENSPNYG00000012547	-	56	30.636	ENSPNYG00000006014	-	68	30.636
ENSPNYG00000012547	-	88	32.342	ENSPNYG00000010501	-	90	32.342
ENSPNYG00000012547	-	75	83.478	ENSPNYG00000024140	-	96	83.478
ENSPNYG00000012547	-	57	39.205	ENSPNYG00000022953	-	77	39.205
ENSPNYG00000012547	-	58	39.326	ENSPNYG00000000591	-	81	39.326
ENSPNYG00000012547	-	89	37.319	ENSPNYG00000005142	-	59	37.319

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPNYG00000012547	-	73	39.556	ENSACIG00000022447	-	81	39.556	Amphilophus_citrinellus
ENSPNYG00000012547	-	63	37.306	ENSACIG00000023684	-	87	37.306	Amphilophus_citrinellus
ENSPNYG00000012547	-	89	36.496	ENSAOCG00000004500	-	73	36.496	Amphiprion_ocellaris
ENSPNYG00000012547	-	74	57.895	ENSAOCG00000018248	-	88	57.895	Amphiprion_ocellaris
ENSPNYG00000012547	-	59	37.766	ENSACAG00000010816	-	53	37.766	Anolis_carolinensis
ENSPNYG00000012547	-	85	36.260	ENSACLG00000010837	-	63	36.260	Astatotilapia_calliptera
ENSPNYG00000012547	-	75	37.391	ENSACLG00000012369	-	77	37.391	Astatotilapia_calliptera
ENSPNYG00000012547	-	71	38.393	ENSAMXG00000040763	-	55	38.393	Astyanax_mexicanus
ENSPNYG00000012547	-	77	39.407	ENSCVAG00000000484	-	78	39.407	Cyprinodon_variegatus
ENSPNYG00000012547	-	63	35.052	ENSHBUG00000023598	-	71	35.052	Haplochromis_burtoni
ENSPNYG00000012547	-	86	42.803	ENSLACG00000022331	-	80	42.803	Latimeria_chalumnae
ENSPNYG00000012547	-	93	40.845	ENSLACG00000022376	-	60	40.845	Latimeria_chalumnae
ENSPNYG00000012547	-	88	35.926	ENSMZEG00005006211	-	65	35.926	Maylandia_zebra
ENSPNYG00000012547	-	83	53.725	ENSMMOG00000003125	-	84	53.725	Mola_mola
ENSPNYG00000012547	-	83	50.593	ENSMMOG00000007110	-	92	50.593	Mola_mola
ENSPNYG00000012547	-	76	38.034	ENSORLG00000028976	-	62	38.034	Oryzias_latipes
ENSPNYG00000012547	-	88	37.918	ENSORLG00000028706	-	54	37.918	Oryzias_latipes
ENSPNYG00000012547	-	90	36.879	ENSORLG00000030126	-	63	36.879	Oryzias_latipes
ENSPNYG00000012547	-	66	39.713	ENSORLG00020018629	-	53	39.713	Oryzias_latipes_hni
ENSPNYG00000012547	-	88	37.546	ENSORLG00020016429	-	52	37.546	Oryzias_latipes_hni
ENSPNYG00000012547	-	80	38.400	ENSORLG00015007976	-	65	38.400	Oryzias_latipes_hsok
ENSPNYG00000012547	-	68	39.906	ENSORLG00015007703	-	52	39.906	Oryzias_latipes_hsok
ENSPNYG00000012547	-	77	34.615	ENSOMEG00000008379	-	72	36.325	Oryzias_melastigma
ENSPNYG00000012547	-	90	35.461	ENSOMEG00000022009	-	59	35.461	Oryzias_melastigma
ENSPNYG00000012547	-	54	30.178	ENSPMGG00000010004	-	59	30.178	Periophthalmus_magnuspinnatus
ENSPNYG00000012547	-	50	36.943	ENSPMGG00000010144	-	62	36.943	Periophthalmus_magnuspinnatus
ENSPNYG00000012547	-	76	44.118	ENSPMEG00000003715	-	79	44.118	Poecilia_mexicana
ENSPNYG00000012547	-	76	38.462	ENSPNAG00000014375	-	57	38.462	Pygocentrus_nattereri
ENSPNYG00000012547	-	68	53.589	ENSSLDG00000008400	-	86	53.589	Seriola_lalandi_dorsalis
ENSPNYG00000012547	-	74	32.018	ENSXETG00000031743	-	91	32.018	Xenopus_tropicalis