EuRBPDB

  • Home
  • Cancer
  • Family
  • Species
  • RBPredictor
  • Search
  • Download
  • Submit
  • Help
  • Contact

  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSPNYG00000012578 (Gene tree)
Gene ID
102211656
Gene Symbol
pabpc1b
Alias
-
Full Name
polyadenylate-binding protein 1
Gene Type
protein_coding
Species
Pundamilia_nyererei
Status
putative
Strand
Plus strand
Length
8333 bases
Position
chrJH419233.1:3638602-3646934
Accession
102211656
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSPNYP00000016640PABPPF00658.184.1e-3211
ENSPNYP00000016619PABPPF00658.184.4e-3211
ENSPNYP00000016640RRM_5PF13893.63e-1012
ENSPNYP00000016640RRM_5PF13893.63e-1022
ENSPNYP00000016619RRM_5PF13893.63.7e-1012
ENSPNYP00000016619RRM_5PF13893.63.7e-1022
ENSPNYP00000016640RRM_1PF00076.223.9e-8914
ENSPNYP00000016640RRM_1PF00076.223.9e-8924
ENSPNYP00000016640RRM_1PF00076.223.9e-8934
ENSPNYP00000016640RRM_1PF00076.223.9e-8944
ENSPNYP00000016619RRM_1PF00076.224.8e-8914
ENSPNYP00000016619RRM_1PF00076.224.8e-8924
ENSPNYP00000016619RRM_1PF00076.224.8e-8934
ENSPNYP00000016619RRM_1PF00076.224.8e-8944
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSPNYT00000017032-4405XM_005728501ENSPNYP00000016619634 (aa)XP_005728558UPI000329FE9B
ENSPNYT00000017054-1836-ENSPNYP00000016640611 (aa)--
Gene Model
Click here to download ENSPNYG00000012578's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSPNYG00000012578's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSPNYG00000012578pabpc1b9875.529ENSPNYG00000004101pabpc1l9975.529
ENSPNYG00000012578pabpc1b6237.333ENSPNYG00000017434rbm196437.333
ENSPNYG00000012578pabpc1b9975.994ENSPNYG00000006134pabpc49975.987
ENSPNYG00000012578pabpc1b5536.047ENSPNYG00000002565-5236.047
ENSPNYG00000012578pabpc1b5539.759ENSPNYG00000017486celf5a6739.759
ENSPNYG00000012578pabpc1b5230.337ENSPNYG00000020763-6930.435
ENSPNYG00000012578pabpc1b5036.986ENSPNYG00000004167celf3b6636.145
ENSPNYG00000012578pabpc1b6136.145ENSPNYG00000021720elavl48736.145
ENSPNYG00000012578pabpc1b5534.091ENSPNYG00000015832-5234.091
ENSPNYG00000012578pabpc1b6130.719ENSPNYG00000013186elavl38730.921
ENSPNYG00000012578pabpc1b5935.165ENSPNYG00000013107-9435.165
ENSPNYG00000012578pabpc1b10089.185ENSPNYG00000005192pabpc1a10089.185
ENSPNYG00000012578pabpc1b5941.026ENSPNYG00000010982-7141.026
ENSPNYG00000012578pabpc1b6137.349ENSPNYG00000001514ELAVL29937.349
ENSPNYG00000012578pabpc1b6130.208ENSPNYG00000008384tia17130.208
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSPNYG00000012578pabpc1b6078.061ENSG00000184388PABPC1L2B9878.061Homo_sapiens
ENSPNYG00000012578pabpc1b6078.061ENSG00000186288PABPC1L2A9878.061Homo_sapiens
ENSPNYG00000012578pabpc1b10096.845ENSAPOG00000017776pabpc1b10096.845Acanthochromis_polyacanthus
ENSPNYG00000012578pabpc1b10089.342ENSAPOG00000015105pabpc1a10089.185Acanthochromis_polyacanthus
ENSPNYG00000012578pabpc1b6178.061ENSAMEG00000019441-9878.061Ailuropoda_melanoleuca
ENSPNYG00000012578pabpc1b10089.342ENSACIG00000004685pabpc1a10089.342Amphilophus_citrinellus
ENSPNYG00000012578pabpc1b10092.628ENSACIG00000018366pabpc1b10092.937Amphilophus_citrinellus
ENSPNYG00000012578pabpc1b10096.057ENSAOCG00000019839pabpc1b10096.057Amphiprion_ocellaris
ENSPNYG00000012578pabpc1b10088.871ENSAOCG00000011656pabpc1a10089.028Amphiprion_ocellaris
ENSPNYG00000012578pabpc1b10088.871ENSAPEG00000006963pabpc1a10089.028Amphiprion_percula
ENSPNYG00000012578pabpc1b10096.057ENSAPEG00000010435pabpc1b10096.057Amphiprion_percula
ENSPNYG00000012578pabpc1b10095.597ENSATEG00000012917pabpc1b10095.597Anabas_testudineus
ENSPNYG00000012578pabpc1b10089.185ENSATEG00000024852pabpc1a10089.342Anabas_testudineus
ENSPNYG00000012578pabpc1b6078.061ENSANAG00000019429-9878.061Aotus_nancymaae
ENSPNYG00000012578pabpc1b6078.061ENSANAG00000019431-9878.061Aotus_nancymaae
ENSPNYG00000012578pabpc1b9993.510ENSACLG00000009399pabpc1a10093.510Astatotilapia_calliptera
ENSPNYG00000012578pabpc1b100100.000ENSACLG00000014335pabpc1b100100.000Astatotilapia_calliptera
ENSPNYG00000012578pabpc1b10093.543ENSAMXG00000008599pabpc1b10093.543Astyanax_mexicanus
ENSPNYG00000012578pabpc1b6275.120ENSBTAG00000052491-9875.120Bos_taurus
ENSPNYG00000012578pabpc1b6177.073ENSBTAG00000050902-9877.073Bos_taurus
ENSPNYG00000012578pabpc1b6078.061ENSCJAG00000041326-9878.061Callithrix_jacchus
ENSPNYG00000012578pabpc1b6277.073ENSCAFG00020002052-9877.073Canis_lupus_dingo
ENSPNYG00000012578pabpc1b6078.061ENSCHIG00000006283-9878.061Capra_hircus
ENSPNYG00000012578pabpc1b6078.061ENSCHIG00000011138-9878.061Capra_hircus
ENSPNYG00000012578pabpc1b6078.061ENSTSYG00000001775-9878.061Carlito_syrichta
ENSPNYG00000012578pabpc1b6178.061ENSCPOG00000009525-9878.061Cavia_porcellus
ENSPNYG00000012578pabpc1b6078.061ENSCCAG00000031524-9878.061Cebus_capucinus
ENSPNYG00000012578pabpc1b6078.061ENSCATG00000042826-9878.061Cercocebus_atys
ENSPNYG00000012578pabpc1b6078.061ENSCATG00000043125-9878.061Cercocebus_atys
ENSPNYG00000012578pabpc1b6077.041ENSCLAG00000017412-9877.041Chinchilla_lanigera
ENSPNYG00000012578pabpc1b6077.041ENSCLAG00000017409-9877.041Chinchilla_lanigera
ENSPNYG00000012578pabpc1b6178.061ENSCSAG00000000102-9878.061Chlorocebus_sabaeus
ENSPNYG00000012578pabpc1b6079.006ENSCGRG00001023387-9676.804Cricetulus_griseus_chok1gshd
ENSPNYG00000012578pabpc1b10090.694ENSCSEG00000015241-10090.694Cynoglossus_semilaevis
ENSPNYG00000012578pabpc1b9989.683ENSCSEG00000013324pabpc1a9989.841Cynoglossus_semilaevis
ENSPNYG00000012578pabpc1b10089.185ENSCVAG00000021872pabpc1a10088.871Cyprinodon_variegatus
ENSPNYG00000012578pabpc1b10092.598ENSCVAG00000005489pabpc1b10092.598Cyprinodon_variegatus
ENSPNYG00000012578pabpc1b10090.409ENSDARG00000017219pabpc1a10090.409Danio_rerio
ENSPNYG00000012578pabpc1b10094.331ENSDARG00000021140pabpc1b10094.961Danio_rerio
ENSPNYG00000012578pabpc1b6179.365ENSDNOG00000030926-9877.551Dasypus_novemcinctus
ENSPNYG00000012578pabpc1b6076.531ENSDORG00000011362-9876.531Dipodomys_ordii
ENSPNYG00000012578pabpc1b6276.699ENSEASG00005010399-9876.699Equus_asinus_asinus
ENSPNYG00000012578pabpc1b6276.699ENSECAG00000002620-9876.699Equus_caballus
ENSPNYG00000012578pabpc1b6173.469ENSEEUG00000008203-9873.469Erinaceus_europaeus
ENSPNYG00000012578pabpc1b6258.621ENSELUG00000005389-9758.621Esox_lucius
ENSPNYG00000012578pabpc1b9990.566ENSELUG00000003614pabpc1a10090.409Esox_lucius
ENSPNYG00000012578pabpc1b10090.581ENSELUG00000015062-10090.581Esox_lucius
ENSPNYG00000012578pabpc1b6078.061ENSFCAG00000039701-9878.061Felis_catus
ENSPNYG00000012578pabpc1b6178.061ENSFDAG00000005484-9878.061Fukomys_damarensis
ENSPNYG00000012578pabpc1b10088.871ENSFHEG00000018979pabpc1a10089.028Fundulus_heteroclitus
ENSPNYG00000012578pabpc1b10092.902ENSFHEG00000008186pabpc1b10092.902Fundulus_heteroclitus
ENSPNYG00000012578pabpc1b9988.080ENSGMOG00000013448pabpc1a10087.944Gadus_morhua
ENSPNYG00000012578pabpc1b9096.069ENSGMOG00000002448-10084.424Gadus_morhua
ENSPNYG00000012578pabpc1b10094.164ENSGAFG00000010193pabpc1b10094.164Gambusia_affinis
ENSPNYG00000012578pabpc1b10088.401ENSGAFG00000019750pabpc1a10088.558Gambusia_affinis
ENSPNYG00000012578pabpc1b10089.655ENSGACG00000003572pabpc1a10089.655Gasterosteus_aculeatus
ENSPNYG00000012578pabpc1b10091.277ENSGACG00000003771pabpc1b10091.589Gasterosteus_aculeatus
ENSPNYG00000012578pabpc1b6078.061ENSGGOG00000043933-9878.061Gorilla_gorilla
ENSPNYG00000012578pabpc1b6078.061ENSGGOG00000038606-9878.061Gorilla_gorilla
ENSPNYG00000012578pabpc1b100100.000ENSHBUG00000002075pabpc1b100100.000Haplochromis_burtoni
ENSPNYG00000012578pabpc1b9993.510ENSHBUG00000020487pabpc1a10093.510Haplochromis_burtoni
ENSPNYG00000012578pabpc1b6078.061ENSHGLG00000019762-9878.061Heterocephalus_glaber_female
ENSPNYG00000012578pabpc1b6078.061ENSHGLG00000019668-9878.061Heterocephalus_glaber_female
ENSPNYG00000012578pabpc1b6178.061ENSHGLG00100020854-9878.061Heterocephalus_glaber_male
ENSPNYG00000012578pabpc1b9871.774ENSHCOG00000003175pabpc1b9971.659Hippocampus_comes
ENSPNYG00000012578pabpc1b10089.185ENSHCOG00000013502pabpc1a10089.342Hippocampus_comes
ENSPNYG00000012578pabpc1b10087.874ENSIPUG00000008848pabpc1a10087.874Ictalurus_punctatus
ENSPNYG00000012578pabpc1b7457.048ENSIPUG00000021244-6655.010Ictalurus_punctatus
ENSPNYG00000012578pabpc1b10088.493ENSIPUG00000010791-10088.493Ictalurus_punctatus
ENSPNYG00000012578pabpc1b7555.224ENSIPUG00000018724-7855.224Ictalurus_punctatus
ENSPNYG00000012578pabpc1b6178.571ENSSTOG00000026028-9878.571Ictidomys_tridecemlineatus
ENSPNYG00000012578pabpc1b6178.571ENSSTOG00000022096-9878.571Ictidomys_tridecemlineatus
ENSPNYG00000012578pabpc1b6077.551ENSJJAG00000007037-9877.551Jaculus_jaculus
ENSPNYG00000012578pabpc1b10093.533ENSKMAG00000008049pabpc1b10093.849Kryptolebias_marmoratus
ENSPNYG00000012578pabpc1b10089.185ENSKMAG00000000605pabpc1a10088.871Kryptolebias_marmoratus
ENSPNYG00000012578pabpc1b10095.110ENSLBEG00000026845pabpc1b10095.110Labrus_bergylta
ENSPNYG00000012578pabpc1b10089.028ENSLBEG00000024002-10089.028Labrus_bergylta
ENSPNYG00000012578pabpc1b6177.436ENSLAFG00000023096-9877.436Loxodonta_africana
ENSPNYG00000012578pabpc1b6077.665ENSMFAG00000028878-9877.665Macaca_fascicularis
ENSPNYG00000012578pabpc1b6078.061ENSMMUG00000037681-9878.061Macaca_mulatta
ENSPNYG00000012578pabpc1b6078.061ENSMMUG00000009740-9878.061Macaca_mulatta
ENSPNYG00000012578pabpc1b6078.061ENSMMUG00000039929-9878.061Macaca_mulatta
ENSPNYG00000012578pabpc1b6078.061ENSMNEG00000037732-9878.061Macaca_nemestrina
ENSPNYG00000012578pabpc1b6078.061ENSMLEG00000027495-9878.061Mandrillus_leucophaeus
ENSPNYG00000012578pabpc1b9992.788ENSMAMG00000004502-10092.788Mastacembelus_armatus
ENSPNYG00000012578pabpc1b10095.899ENSMAMG00000014610pabpc1b10095.899Mastacembelus_armatus
ENSPNYG00000012578pabpc1b100100.000ENSMZEG00005026745pabpc1b100100.000Maylandia_zebra
ENSPNYG00000012578pabpc1b9993.510ENSMZEG00005025416pabpc1a10093.510Maylandia_zebra
ENSPNYG00000012578pabpc1b6078.061ENSMICG00000047642-9878.061Microcebus_murinus
ENSPNYG00000012578pabpc1b9991.587ENSMMOG00000018044pabpc1a9996.078Mola_mola
ENSPNYG00000012578pabpc1b10090.097ENSMMOG00000018009pabpc1b10090.260Mola_mola
ENSPNYG00000012578pabpc1b9966.456ENSMODG00000015024-9966.456Monodelphis_domestica
ENSPNYG00000012578pabpc1b9873.089ENSMODG00000013156-9873.248Monodelphis_domestica
ENSPNYG00000012578pabpc1b10090.180ENSMALG00000006066pabpc1b10089.362Monopterus_albus
ENSPNYG00000012578pabpc1b10089.028ENSMALG00000013020-10089.342Monopterus_albus
ENSPNYG00000012578pabpc1b6080.874ENSNGAG00000012688-9877.551Nannospalax_galili
ENSPNYG00000012578pabpc1b10099.685ENSNBRG00000013737pabpc1b10099.685Neolamprologus_brichardi
ENSPNYG00000012578pabpc1b9993.510ENSNBRG00000003068-10093.510Neolamprologus_brichardi
ENSPNYG00000012578pabpc1b6078.061ENSNLEG00000018128-9878.061Nomascus_leucogenys
ENSPNYG00000012578pabpc1b6077.551ENSODEG00000018540-9877.551Octodon_degus
ENSPNYG00000012578pabpc1b10099.369ENSONIG00000002717pabpc1b10099.369Oreochromis_niloticus
ENSPNYG00000012578pabpc1b10089.185ENSONIG00000006871-10089.185Oreochromis_niloticus
ENSPNYG00000012578pabpc1b6178.061ENSOCUG00000002565-9878.061Oryctolagus_cuniculus
ENSPNYG00000012578pabpc1b10087.382ENSORLG00000003008-10087.382Oryzias_latipes
ENSPNYG00000012578pabpc1b9992.162ENSORLG00000002691pabpc1a10092.180Oryzias_latipes
ENSPNYG00000012578pabpc1b10087.382ENSORLG00020022259-10087.382Oryzias_latipes_hni
ENSPNYG00000012578pabpc1b10088.088ENSORLG00020022398pabpc1a10088.245Oryzias_latipes_hni
ENSPNYG00000012578pabpc1b10087.539ENSORLG00015010932-10087.539Oryzias_latipes_hsok
ENSPNYG00000012578pabpc1b10087.931ENSORLG00015013633pabpc110088.088Oryzias_latipes_hsok
ENSPNYG00000012578pabpc1b10088.245ENSOMEG00000020219pabpc1a10088.401Oryzias_melastigma
ENSPNYG00000012578pabpc1b9986.331ENSOMEG00000013627pabpc1b10083.295Oryzias_melastigma
ENSPNYG00000012578pabpc1b6178.061ENSOGAG00000026047-9878.061Otolemur_garnettii
ENSPNYG00000012578pabpc1b6178.061ENSOGAG00000029513-9878.061Otolemur_garnettii
ENSPNYG00000012578pabpc1b6178.061ENSOARG00000005943-9878.061Ovis_aries
ENSPNYG00000012578pabpc1b6078.061ENSPPAG00000012920-9878.061Pan_paniscus
ENSPNYG00000012578pabpc1b6178.061ENSPPRG00000011804-9878.061Panthera_pardus
ENSPNYG00000012578pabpc1b6178.061ENSPPRG00000011809-9878.061Panthera_pardus
ENSPNYG00000012578pabpc1b6078.061ENSPTRG00000028252-9878.061Pan_troglodytes
ENSPNYG00000012578pabpc1b6078.061ENSPANG00000011549-9878.061Papio_anubis
ENSPNYG00000012578pabpc1b10094.803ENSPKIG00000005676pabpc1b10094.646Paramormyrops_kingsleyae
ENSPNYG00000012578pabpc1b7393.946ENSPMGG00000023134-9793.946Periophthalmus_magnuspinnatus
ENSPNYG00000012578pabpc1b7590.591ENSPMGG00000022487pabpc1a9292.152Periophthalmus_magnuspinnatus
ENSPNYG00000012578pabpc1b9970.860ENSPCIG00000016995-5570.860Phascolarctos_cinereus
ENSPNYG00000012578pabpc1b10087.692ENSPFOG00000010815pabpc1a10087.846Poecilia_formosa
ENSPNYG00000012578pabpc1b10093.691ENSPFOG00000005917pabpc1b10093.691Poecilia_formosa
ENSPNYG00000012578pabpc1b10089.185ENSPLAG00000004114pabpc1a10089.342Poecilia_latipinna
ENSPNYG00000012578pabpc1b10094.006ENSPLAG00000001388pabpc1b10094.006Poecilia_latipinna
ENSPNYG00000012578pabpc1b10093.691ENSPMEG00000014399pabpc1b10093.691Poecilia_mexicana
ENSPNYG00000012578pabpc1b10089.185ENSPMEG00000001334pabpc1a10089.342Poecilia_mexicana
ENSPNYG00000012578pabpc1b9993.029ENSPREG00000019595pabpc1a10093.029Poecilia_reticulata
ENSPNYG00000012578pabpc1b10094.006ENSPREG00000010911pabpc1b10094.006Poecilia_reticulata
ENSPNYG00000012578pabpc1b6178.061ENSPPYG00000020468-9878.061Pongo_abelii
ENSPNYG00000012578pabpc1b6178.061ENSPCAG00000005308-9878.061Procavia_capensis
ENSPNYG00000012578pabpc1b6078.571ENSPCOG00000026349-9878.571Propithecus_coquereli
ENSPNYG00000012578pabpc1b6178.974ENSPVAG00000016117-9878.974Pteropus_vampyrus
ENSPNYG00000012578pabpc1b10093.543ENSPNAG00000024626pabpc1b10093.543Pygocentrus_nattereri
ENSPNYG00000012578pabpc1b10089.937ENSPNAG00000028408pabpc1a10089.780Pygocentrus_nattereri
ENSPNYG00000012578pabpc1b8790.071ENSRBIG00000028738-9590.714Rhinopithecus_bieti
ENSPNYG00000012578pabpc1b6078.061ENSRBIG00000027173-9878.061Rhinopithecus_bieti
ENSPNYG00000012578pabpc1b6078.061ENSRROG00000017404-9878.061Rhinopithecus_roxellana
ENSPNYG00000012578pabpc1b9863.344ENSSHAG00000000511-10063.344Sarcophilus_harrisii
ENSPNYG00000012578pabpc1b6779.769ENSSFOG00015019668-7779.769Scleropages_formosus
ENSPNYG00000012578pabpc1b10094.322ENSSFOG00015002752-10094.322Scleropages_formosus
ENSPNYG00000012578pabpc1b10090.709ENSSFOG00015006662pabpc1a10090.709Scleropages_formosus
ENSPNYG00000012578pabpc1b10089.185ENSSMAG00000010803pabpc1a10089.185Scophthalmus_maximus
ENSPNYG00000012578pabpc1b10094.795ENSSMAG00000006869pabpc1b10094.795Scophthalmus_maximus
ENSPNYG00000012578pabpc1b10089.185ENSSDUG00000006675pabpc1a10089.185Seriola_dumerili
ENSPNYG00000012578pabpc1b10094.006ENSSDUG00000011965pabpc1b10094.006Seriola_dumerili
ENSPNYG00000012578pabpc1b10089.185ENSSLDG00000011661pabpc1a10089.185Seriola_lalandi_dorsalis
ENSPNYG00000012578pabpc1b10095.775ENSSLDG00000014156pabpc1b10095.775Seriola_lalandi_dorsalis
ENSPNYG00000012578pabpc1b10089.185ENSSPAG00000014453-10089.342Stegastes_partitus
ENSPNYG00000012578pabpc1b10096.530ENSSPAG00000019265pabpc1b10096.530Stegastes_partitus
ENSPNYG00000012578pabpc1b6078.061ENSSSCG00000036336-9878.061Sus_scrofa
ENSPNYG00000012578pabpc1b6078.061ENSSSCG00000032167-9878.061Sus_scrofa
ENSPNYG00000012578pabpc1b10088.401ENSTRUG00000011577-10088.401Takifugu_rubripes
ENSPNYG00000012578pabpc1b10090.866ENSTRUG00000003767-10091.024Takifugu_rubripes
ENSPNYG00000012578pabpc1b10090.596ENSTNIG00000009153pabpc1b10090.596Tetraodon_nigroviridis
ENSPNYG00000012578pabpc1b10085.781ENSTNIG00000013307pabpc1a10085.781Tetraodon_nigroviridis
ENSPNYG00000012578pabpc1b6178.061ENSTTRG00000013181-9878.061Tursiops_truncatus
ENSPNYG00000012578pabpc1b6078.061ENSUAMG00000008089-9878.061Ursus_americanus
ENSPNYG00000012578pabpc1b9753.094ENSUMAG00000023926-8967.403Ursus_maritimus
ENSPNYG00000012578pabpc1b6078.061ENSUMAG00000003364-9878.061Ursus_maritimus
ENSPNYG00000012578pabpc1b6177.000ENSVVUG00000015892-9777.000Vulpes_vulpes
ENSPNYG00000012578pabpc1b9946.047ENSXETG00000015439-10046.047Xenopus_tropicalis
ENSPNYG00000012578pabpc1b10087.662ENSXCOG00000017066pabpc1a10087.662Xiphophorus_couchianus
ENSPNYG00000012578pabpc1b10089.117ENSXCOG00000019901pabpc1b10089.117Xiphophorus_couchianus
ENSPNYG00000012578pabpc1b10088.871ENSXMAG00000002555pabpc1a10089.028Xiphophorus_maculatus
ENSPNYG00000012578pabpc1b10094.006ENSXMAG00000003753pabpc1b10094.006Xiphophorus_maculatus

Copyright © , Bioinformatics Center, Sun Yat-sen Memorial Hospital, Sun Yat-sen University, China. All Rights Reserved.

Any comment and suggestion, please contact us