EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPNYG00000012624 (Gene tree)
Gene ID: 102200034
Gene Symbol: -
Alias: -
Full Name: RNA-binding motif%2C single-stranded-interacting protein 3-like
Gene Type: protein_coding
Species: Pundamilia_nyererei
Status: putative
Strand: Plus strand
Length: 286007 bases
Position: chrJH419307.1:1815286-2101292
Accession: 102200034
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPNYP00000016779	RRM_1	PF00076.22	2.5e-31	1	2
ENSPNYP00000016779	RRM_1	PF00076.22	2.5e-31	2	2
ENSPNYP00000016771	RRM_1	PF00076.22	2.9e-31	1	2
ENSPNYP00000016771	RRM_1	PF00076.22	2.9e-31	2	2
ENSPNYP00000016747	RRM_1	PF00076.22	3.2e-31	1	2
ENSPNYP00000016747	RRM_1	PF00076.22	3.2e-31	2	2
ENSPNYP00000016720	RRM_1	PF00076.22	4.2e-31	1	2
ENSPNYP00000016720	RRM_1	PF00076.22	4.2e-31	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPNYT00000017140	-	2415	XM_005740713	ENSPNYP00000016720	495 (aa)	XP_005740770	-
ENSPNYT00000017166	-	2302	-	ENSPNYP00000016747	450 (aa)	-	-
ENSPNYT00000017191	-	1371	-	ENSPNYP00000016771	456 (aa)	-	-
ENSPNYT00000017199	-	2100	XM_005740715	ENSPNYP00000016779	415 (aa)	XP_005740772	UPI0003BCF6B2

Gene Model

Click here to download ENSPNYG00000012624's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPNYG00000012624's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPNYG00000012624	-	87	74.247	ENSPNYG00000020829	rbms2a	89	73.475
ENSPNYG00000012624	-	99	81.797	ENSPNYG00000010546	rbms3	99	82.033
ENSPNYG00000012624	-	88	68.194	ENSPNYG00000002643	RBMS1	93	69.733
ENSPNYG00000012624	-	94	68.828	ENSPNYG00000017656	rbms2b	87	71.314

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPNYG00000012624	-	99	88.571	ENSG00000144642	RBMS3	100	90.152	Homo_sapiens
ENSPNYG00000012624	-	100	99.038	ENSAPOG00000003432	-	100	99.038	Acanthochromis_polyacanthus
ENSPNYG00000012624	-	99	73.961	ENSAPOG00000007266	rbms3	93	81.818	Acanthochromis_polyacanthus
ENSPNYG00000012624	-	69	84.488	ENSAMEG00000005947	RBMS3	99	84.488	Ailuropoda_melanoleuca
ENSPNYG00000012624	-	78	96.626	ENSACIG00000006987	-	89	96.626	Amphilophus_citrinellus
ENSPNYG00000012624	-	87	74.521	ENSACIG00000021113	RBMS3	95	74.795	Amphilophus_citrinellus
ENSPNYG00000012624	-	99	82.160	ENSAOCG00000021274	rbms3	99	82.160	Amphiprion_ocellaris
ENSPNYG00000012624	-	100	96.896	ENSAOCG00000024104	-	100	93.197	Amphiprion_ocellaris
ENSPNYG00000012624	-	100	90.843	ENSAPEG00000009481	-	100	90.843	Amphiprion_percula
ENSPNYG00000012624	-	82	83.239	ENSAPEG00000016299	rbms3	87	86.446	Amphiprion_percula
ENSPNYG00000012624	-	100	98.798	ENSATEG00000008433	-	100	98.798	Anabas_testudineus
ENSPNYG00000012624	-	99	82.783	ENSATEG00000024295	rbms3	99	83.019	Anabas_testudineus
ENSPNYG00000012624	-	99	85.417	ENSAPLG00000012270	RBMS3	99	84.722	Anas_platyrhynchos
ENSPNYG00000012624	-	99	87.828	ENSACAG00000028664	RBMS3	99	87.828	Anolis_carolinensis
ENSPNYG00000012624	-	99	85.912	ENSANAG00000021899	RBMS3	99	85.912	Aotus_nancymaae
ENSPNYG00000012624	-	100	100.000	ENSACLG00000008976	-	94	100.000	Astatotilapia_calliptera
ENSPNYG00000012624	-	99	82.033	ENSACLG00000018506	rbms3	99	82.270	Astatotilapia_calliptera
ENSPNYG00000012624	-	99	90.580	ENSAMXG00000020388	rbms3	99	90.580	Astyanax_mexicanus
ENSPNYG00000012624	-	62	87.597	ENSAMXG00000043770	-	100	87.597	Astyanax_mexicanus
ENSPNYG00000012624	-	99	88.571	ENSBTAG00000044062	RBMS3	99	88.571	Bos_taurus
ENSPNYG00000012624	-	99	85.912	ENSCJAG00000004312	RBMS3	99	85.912	Callithrix_jacchus
ENSPNYG00000012624	-	99	85.321	ENSCAFG00000005464	RBMS3	99	85.321	Canis_familiaris
ENSPNYG00000012624	-	99	85.321	ENSCAFG00020024980	RBMS3	99	85.321	Canis_lupus_dingo
ENSPNYG00000012624	-	99	88.571	ENSCHIG00000009144	RBMS3	99	88.571	Capra_hircus
ENSPNYG00000012624	-	76	86.061	ENSTSYG00000002615	RBMS3	99	86.061	Carlito_syrichta
ENSPNYG00000012624	-	88	83.562	ENSCAPG00000017783	RBMS3	95	82.842	Cavia_aperea
ENSPNYG00000012624	-	99	88.916	ENSCPOG00000006457	RBMS3	99	88.916	Cavia_porcellus
ENSPNYG00000012624	-	99	85.912	ENSCCAG00000008671	RBMS3	99	85.912	Cebus_capucinus
ENSPNYG00000012624	-	100	85.550	ENSCATG00000013222	RBMS3	100	85.550	Cercocebus_atys
ENSPNYG00000012624	-	99	88.095	ENSCLAG00000005866	RBMS3	99	88.095	Chinchilla_lanigera
ENSPNYG00000012624	-	65	88.148	ENSCSAG00000009655	RBMS3	99	88.148	Chlorocebus_sabaeus
ENSPNYG00000012624	-	87	88.000	ENSCHOG00000000758	RBMS3	87	88.000	Choloepus_hoffmanni
ENSPNYG00000012624	-	99	88.067	ENSCPBG00000022678	RBMS3	99	88.067	Chrysemys_picta_bellii
ENSPNYG00000012624	-	99	85.681	ENSCANG00000032137	RBMS3	99	85.681	Colobus_angolensis_palliatus
ENSPNYG00000012624	-	99	86.747	ENSCGRG00001007243	Rbms3	99	86.747	Cricetulus_griseus_chok1gshd
ENSPNYG00000012624	-	99	86.747	ENSCGRG00000004599	Rbms3	99	86.747	Cricetulus_griseus_crigri
ENSPNYG00000012624	-	100	96.875	ENSCSEG00000014677	-	95	99.184	Cynoglossus_semilaevis
ENSPNYG00000012624	-	99	81.882	ENSCSEG00000010011	RBMS3	99	82.118	Cynoglossus_semilaevis
ENSPNYG00000012624	-	100	98.321	ENSCVAG00000022814	-	100	98.433	Cyprinodon_variegatus
ENSPNYG00000012624	-	99	83.333	ENSCVAG00000022354	rbms3	99	83.333	Cyprinodon_variegatus
ENSPNYG00000012624	-	99	90.097	ENSDARG00000044574	rbms3	95	94.891	Danio_rerio
ENSPNYG00000012624	-	99	88.095	ENSDNOG00000016645	RBMS3	96	88.095	Dasypus_novemcinctus
ENSPNYG00000012624	-	99	87.381	ENSDORG00000007220	Rbms3	99	87.381	Dipodomys_ordii
ENSPNYG00000012624	-	87	83.333	ENSETEG00000009485	-	80	70.571	Echinops_telfairi
ENSPNYG00000012624	-	67	54.317	ENSEBUG00000005830	rbms3	86	55.472	Eptatretus_burgeri
ENSPNYG00000012624	-	99	88.333	ENSEASG00005006152	RBMS3	99	88.333	Equus_asinus_asinus
ENSPNYG00000012624	-	99	88.333	ENSECAG00000017871	RBMS3	99	88.333	Equus_caballus
ENSPNYG00000012624	-	90	79.545	ENSEEUG00000014337	RBMS3	100	79.545	Erinaceus_europaeus
ENSPNYG00000012624	-	99	80.142	ENSELUG00000002862	rbms3	99	80.142	Esox_lucius
ENSPNYG00000012624	-	92	95.550	ENSELUG00000006905	-	98	97.942	Esox_lucius
ENSPNYG00000012624	-	99	88.095	ENSFCAG00000002130	RBMS3	99	88.095	Felis_catus
ENSPNYG00000012624	-	99	88.305	ENSFALG00000009165	RBMS3	99	88.305	Ficedula_albicollis
ENSPNYG00000012624	-	99	87.619	ENSFDAG00000008278	RBMS3	99	87.619	Fukomys_damarensis
ENSPNYG00000012624	-	95	69.383	ENSFHEG00000004787	RBMS3	94	75.749	Fundulus_heteroclitus
ENSPNYG00000012624	-	90	88.917	ENSGMOG00000002600	-	96	88.917	Gadus_morhua
ENSPNYG00000012624	-	99	88.305	ENSGALG00000011439	RBMS3	99	88.305	Gallus_gallus
ENSPNYG00000012624	-	99	82.898	ENSGAFG00000000168	rbms3	99	82.898	Gambusia_affinis
ENSPNYG00000012624	-	100	98.561	ENSGAFG00000003329	-	100	98.561	Gambusia_affinis
ENSPNYG00000012624	-	65	87.085	ENSGAGG00000004039	RBMS3	99	87.085	Gopherus_agassizii
ENSPNYG00000012624	-	99	85.912	ENSGGOG00000007228	RBMS3	99	85.912	Gorilla_gorilla
ENSPNYG00000012624	-	63	85.874	ENSHBUG00000021196	rbms3	94	85.874	Haplochromis_burtoni
ENSPNYG00000012624	-	100	99.798	ENSHBUG00000019785	-	100	95.614	Haplochromis_burtoni
ENSPNYG00000012624	-	99	88.095	ENSHGLG00000002170	RBMS3	99	88.095	Heterocephalus_glaber_female
ENSPNYG00000012624	-	99	88.095	ENSHGLG00100014278	RBMS3	99	88.095	Heterocephalus_glaber_male
ENSPNYG00000012624	-	100	96.882	ENSHCOG00000007894	-	100	96.882	Hippocampus_comes
ENSPNYG00000012624	-	99	90.580	ENSIPUG00000017680	rbms3	99	90.580	Ictalurus_punctatus
ENSPNYG00000012624	-	99	88.571	ENSSTOG00000006324	RBMS3	99	88.571	Ictidomys_tridecemlineatus
ENSPNYG00000012624	-	99	84.524	ENSJJAG00000014708	Rbms3	99	84.762	Jaculus_jaculus
ENSPNYG00000012624	-	100	98.317	ENSKMAG00000012586	-	100	98.317	Kryptolebias_marmoratus
ENSPNYG00000012624	-	99	81.265	ENSKMAG00000020500	rbms3	99	81.265	Kryptolebias_marmoratus
ENSPNYG00000012624	-	100	97.356	ENSLBEG00000027388	-	100	97.356	Labrus_bergylta
ENSPNYG00000012624	-	60	74.242	ENSLBEG00000006677	rbms3	97	74.242	Labrus_bergylta
ENSPNYG00000012624	-	99	90.191	ENSLACG00000010581	RBMS3	99	90.191	Latimeria_chalumnae
ENSPNYG00000012624	-	69	91.003	ENSLOCG00000002328	rbms3	99	91.003	Lepisosteus_oculatus
ENSPNYG00000012624	-	99	85.092	ENSLAFG00000000354	RBMS3	99	85.092	Loxodonta_africana
ENSPNYG00000012624	-	99	88.333	ENSMFAG00000033300	RBMS3	99	88.333	Macaca_fascicularis
ENSPNYG00000012624	-	99	88.333	ENSMMUG00000004404	RBMS3	99	88.333	Macaca_mulatta
ENSPNYG00000012624	-	99	85.681	ENSMNEG00000035839	RBMS3	99	85.681	Macaca_nemestrina
ENSPNYG00000012624	-	100	85.550	ENSMLEG00000029464	RBMS3	100	85.550	Mandrillus_leucophaeus
ENSPNYG00000012624	-	99	83.059	ENSMAMG00000024043	rbms3	99	84.000	Mastacembelus_armatus
ENSPNYG00000012624	-	100	94.235	ENSMAMG00000002176	-	88	98.214	Mastacembelus_armatus
ENSPNYG00000012624	-	100	100.000	ENSMZEG00005026469	-	94	100.000	Maylandia_zebra
ENSPNYG00000012624	-	99	82.033	ENSMZEG00005006308	rbms3	99	82.270	Maylandia_zebra
ENSPNYG00000012624	-	99	86.747	ENSMAUG00000016436	Rbms3	99	86.747	Mesocricetus_auratus
ENSPNYG00000012624	-	99	85.912	ENSMICG00000049249	RBMS3	99	85.912	Microcebus_murinus
ENSPNYG00000012624	-	99	86.506	ENSMOCG00000006997	Rbms3	99	86.506	Microtus_ochrogaster
ENSPNYG00000012624	-	82	84.000	ENSMMOG00000008471	RBMS3	89	87.234	Mola_mola
ENSPNYG00000012624	-	100	96.875	ENSMMOG00000015071	-	100	96.875	Mola_mola
ENSPNYG00000012624	-	99	80.134	ENSMODG00000015125	RBMS3	99	79.464	Monodelphis_domestica
ENSPNYG00000012624	-	100	98.077	ENSMALG00000009155	-	100	98.077	Monopterus_albus
ENSPNYG00000012624	-	99	82.588	ENSMALG00000019536	RBMS3	99	80.660	Monopterus_albus
ENSPNYG00000012624	-	99	85.783	MGP_CAROLIEiJ_G0032783	Rbms3	100	90.338	Mus_caroli
ENSPNYG00000012624	-	99	86.506	ENSMUSG00000039607	Rbms3	100	91.787	Mus_musculus
ENSPNYG00000012624	-	99	86.298	MGP_PahariEiJ_G0015650	Rbms3	100	91.787	Mus_pahari
ENSPNYG00000012624	-	99	86.506	MGP_SPRETEiJ_G0033930	Rbms3	100	91.787	Mus_spretus
ENSPNYG00000012624	-	99	85.321	ENSMPUG00000011956	RBMS3	99	85.321	Mustela_putorius_furo
ENSPNYG00000012624	-	99	88.333	ENSMLUG00000000659	RBMS3	99	88.333	Myotis_lucifugus
ENSPNYG00000012624	-	99	88.434	ENSNGAG00000014039	Rbms3	99	88.434	Nannospalax_galili
ENSPNYG00000012624	-	100	99.759	ENSNBRG00000018065	-	100	99.759	Neolamprologus_brichardi
ENSPNYG00000012624	-	99	85.912	ENSNLEG00000004129	RBMS3	99	85.912	Nomascus_leucogenys
ENSPNYG00000012624	-	99	78.032	ENSMEUG00000004772	RBMS3	99	78.032	Notamacropus_eugenii
ENSPNYG00000012624	-	99	85.219	ENSOPRG00000006808	RBMS3	85	85.219	Ochotona_princeps
ENSPNYG00000012624	-	99	88.571	ENSODEG00000003651	RBMS3	99	88.571	Octodon_degus
ENSPNYG00000012624	-	99	77.143	ENSONIG00000007172	rbms3	99	77.381	Oreochromis_niloticus
ENSPNYG00000012624	-	99	85.321	ENSOANG00000010529	RBMS3	99	85.321	Ornithorhynchus_anatinus
ENSPNYG00000012624	-	99	84.633	ENSOCUG00000004840	RBMS3	99	84.633	Oryctolagus_cuniculus
ENSPNYG00000012624	-	99	81.235	ENSORLG00000005370	RBMS3	99	81.235	Oryzias_latipes
ENSPNYG00000012624	-	100	97.356	ENSORLG00000002306	-	100	97.356	Oryzias_latipes
ENSPNYG00000012624	-	99	80.998	ENSORLG00020022674	RBMS3	99	80.998	Oryzias_latipes_hni
ENSPNYG00000012624	-	100	97.596	ENSORLG00020008496	-	100	97.596	Oryzias_latipes_hni
ENSPNYG00000012624	-	100	97.596	ENSORLG00015015719	-	100	97.596	Oryzias_latipes_hsok
ENSPNYG00000012624	-	99	81.473	ENSORLG00015005509	rbms3	99	81.473	Oryzias_latipes_hsok
ENSPNYG00000012624	-	99	90.562	ENSOMEG00000007677	-	100	97.120	Oryzias_melastigma
ENSPNYG00000012624	-	99	81.948	ENSOMEG00000014805	RBMS3	99	81.948	Oryzias_melastigma
ENSPNYG00000012624	-	99	84.862	ENSOARG00000014684	RBMS3	99	84.862	Ovis_aries
ENSPNYG00000012624	-	99	85.912	ENSPPAG00000036519	RBMS3	99	85.912	Pan_paniscus
ENSPNYG00000012624	-	99	85.219	ENSPPRG00000002761	RBMS3	99	85.219	Panthera_pardus
ENSPNYG00000012624	-	99	87.857	ENSPTIG00000011568	RBMS3	99	87.857	Panthera_tigris_altaica
ENSPNYG00000012624	-	99	88.571	ENSPTRG00000014709	RBMS3	99	88.571	Pan_troglodytes
ENSPNYG00000012624	-	100	85.550	ENSPANG00000010234	RBMS3	100	85.550	Papio_anubis
ENSPNYG00000012624	-	50	93.269	ENSPKIG00000016025	-	86	80.632	Paramormyrops_kingsleyae
ENSPNYG00000012624	-	62	92.636	ENSPKIG00000007989	-	100	92.636	Paramormyrops_kingsleyae
ENSPNYG00000012624	-	99	87.589	ENSPSIG00000005269	RBMS3	99	87.589	Pelodiscus_sinensis
ENSPNYG00000012624	-	82	83.333	ENSPMGG00000021544	rbms3	86	85.542	Periophthalmus_magnuspinnatus
ENSPNYG00000012624	-	92	97.906	ENSPMGG00000021683	-	100	97.906	Periophthalmus_magnuspinnatus
ENSPNYG00000012624	-	99	83.816	ENSPEMG00000001117	Rbms3	99	83.816	Peromyscus_maniculatus_bairdii
ENSPNYG00000012624	-	83	89.459	ENSPCIG00000006106	RBMS3	89	89.720	Phascolarctos_cinereus
ENSPNYG00000012624	-	99	83.373	ENSPFOG00000017887	rbms3	99	83.373	Poecilia_formosa
ENSPNYG00000012624	-	77	81.308	ENSPLAG00000016866	-	82	81.308	Poecilia_latipinna
ENSPNYG00000012624	-	100	98.561	ENSPMEG00000002993	-	100	98.561	Poecilia_mexicana
ENSPNYG00000012624	-	97	96.535	ENSPREG00000018221	-	97	97.222	Poecilia_reticulata
ENSPNYG00000012624	-	100	81.517	ENSPREG00000011880	rbms3	100	81.517	Poecilia_reticulata
ENSPNYG00000012624	-	99	72.248	ENSPPYG00000014050	RBMS3	82	72.248	Pongo_abelii
ENSPNYG00000012624	-	99	66.055	ENSPCAG00000006307	RBMS3	99	66.055	Procavia_capensis
ENSPNYG00000012624	-	99	86.143	ENSPCOG00000017136	RBMS3	99	86.143	Propithecus_coquereli
ENSPNYG00000012624	-	89	88.000	ENSPVAG00000014037	RBMS3	99	76.147	Pteropus_vampyrus
ENSPNYG00000012624	-	99	90.580	ENSPNAG00000001800	rbms3	99	90.580	Pygocentrus_nattereri
ENSPNYG00000012624	-	99	86.747	ENSRNOG00000025881	Rbms3	99	86.747	Rattus_norvegicus
ENSPNYG00000012624	-	99	85.450	ENSRBIG00000035863	RBMS3	99	85.450	Rhinopithecus_bieti
ENSPNYG00000012624	-	88	87.071	ENSRROG00000027512	RBMS3	94	86.010	Rhinopithecus_roxellana
ENSPNYG00000012624	-	99	85.912	ENSSBOG00000020232	RBMS3	99	85.912	Saimiri_boliviensis_boliviensis
ENSPNYG00000012624	-	88	82.787	ENSSHAG00000002411	RBMS3	95	81.720	Sarcophilus_harrisii
ENSPNYG00000012624	-	100	94.471	ENSSFOG00015008578	rbms3	100	94.471	Scleropages_formosus
ENSPNYG00000012624	-	99	79.343	ENSSMAG00000004997	rbms3	99	83.333	Scophthalmus_maximus
ENSPNYG00000012624	-	97	93.284	ENSSMAG00000020065	-	97	93.284	Scophthalmus_maximus
ENSPNYG00000012624	-	100	99.038	ENSSDUG00000019287	-	100	99.038	Seriola_dumerili
ENSPNYG00000012624	-	99	82.824	ENSSDUG00000013656	RBMS3	99	83.059	Seriola_dumerili
ENSPNYG00000012624	-	99	82.477	ENSSLDG00000020276	RBMS3	99	82.710	Seriola_lalandi_dorsalis
ENSPNYG00000012624	-	100	99.038	ENSSLDG00000013224	-	100	99.038	Seriola_lalandi_dorsalis
ENSPNYG00000012624	-	61	95.361	ENSSARG00000000695	RBMS3	77	92.574	Sorex_araneus
ENSPNYG00000012624	-	69	86.301	ENSSPUG00000017197	RBMS3	97	85.185	Sphenodon_punctatus
ENSPNYG00000012624	-	100	96.696	ENSSPAG00000003983	-	100	91.014	Stegastes_partitus
ENSPNYG00000012624	-	99	82.160	ENSSPAG00000020693	rbms3	99	82.394	Stegastes_partitus
ENSPNYG00000012624	-	99	88.095	ENSSSCG00000036381	RBMS3	99	88.095	Sus_scrofa
ENSPNYG00000012624	-	76	84.685	ENSTGUG00000003572	RBMS3	99	84.685	Taeniopygia_guttata
ENSPNYG00000012624	-	99	80.706	ENSTRUG00000021719	RBMS3	99	80.706	Takifugu_rubripes
ENSPNYG00000012624	-	100	85.748	ENSTRUG00000007482	-	100	85.919	Takifugu_rubripes
ENSPNYG00000012624	-	78	88.304	ENSTBEG00000005362	RBMS3	94	87.106	Tupaia_belangeri
ENSPNYG00000012624	-	99	84.633	ENSTTRG00000006202	RBMS3	99	84.633	Tursiops_truncatus
ENSPNYG00000012624	-	99	85.321	ENSUMAG00000000263	RBMS3	99	85.321	Ursus_maritimus
ENSPNYG00000012624	-	88	76.440	ENSVPAG00000003842	RBMS3	94	75.578	Vicugna_pacos
ENSPNYG00000012624	-	88	86.911	ENSVVUG00000004660	RBMS3	94	92.202	Vulpes_vulpes
ENSPNYG00000012624	-	70	81.759	ENSXETG00000032055	RBMS3	98	81.759	Xenopus_tropicalis
ENSPNYG00000012624	-	92	82.776	ENSXCOG00000019600	-	100	82.776	Xiphophorus_couchianus
ENSPNYG00000012624	-	100	98.801	ENSXMAG00000014382	-	100	98.801	Xiphophorus_maculatus
ENSPNYG00000012624	-	99	81.043	ENSXMAG00000021783	rbms3	99	81.043	Xiphophorus_maculatus