EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPNYG00000012720 (Gene tree)
Gene ID: 102202641
Gene Symbol: arl5c
Alias: zgc:77751
Full Name: ADP-ribosylation factor-like protein 5C
Gene Type: protein_coding
Species: Pundamilia_nyererei
Status: putative
Strand: Plus strand
Length: 2883 bases
Position: chrJH419223.1:3084412-3087294
Accession: 102202641
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPNYP00000016786	MMR_HSR1	PF01926.23	5.8e-08	1	1
ENSPNYP00000016799	MMR_HSR1	PF01926.23	7.4e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPNYT00000017206	-	1596	-	ENSPNYP00000016786	164 (aa)	-	-
ENSPNYT00000017219	-	540	XM_005726153	ENSPNYP00000016799	179 (aa)	XP_005726210	UPI000329D6A9

Gene Model

Click here to download ENSPNYG00000012720's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPNYG00000012720's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPNYG00000012720	arl5c	89	43.506	ENSPNYG00000012693	arl4cb	82	43.125
ENSPNYG00000012720	arl5c	100	48.780	ENSPNYG00000009472	-	98	48.295
ENSPNYG00000012720	arl5c	100	44.848	ENSPNYG00000001663	arf5	98	44.068
ENSPNYG00000012720	arl5c	99	44.785	ENSPNYG00000011671	arl1	98	43.820
ENSPNYG00000012720	arl5c	92	43.046	ENSPNYG00000003962	arl3	87	41.509
ENSPNYG00000012720	arl5c	68	30.172	ENSPNYG00000009490	si:dkey-16l2.16	55	30.172
ENSPNYG00000012720	arl5c	86	30.496	ENSPNYG00000012440	sar1b	71	30.496
ENSPNYG00000012720	arl5c	100	43.636	ENSPNYG00000004931	-	100	42.778
ENSPNYG00000012720	arl5c	89	43.791	ENSPNYG00000019193	-	79	43.396
ENSPNYG00000012720	arl5c	100	47.273	ENSPNYG00000020555	arf2b	98	46.328
ENSPNYG00000012720	arl5c	87	30.128	ENSPNYG00000015445	arl8bb	82	30.128
ENSPNYG00000012720	arl5c	52	73.256	ENSPNYG00000000635	ARL5B	80	73.256
ENSPNYG00000012720	arl5c	100	46.667	ENSPNYG00000019094	-	98	45.763
ENSPNYG00000012720	arl5c	89	44.737	ENSPNYG00000013877	arl4aa	79	44.937
ENSPNYG00000012720	arl5c	100	38.798	ENSPNYG00000016273	-	97	38.462
ENSPNYG00000012720	arl5c	100	46.667	ENSPNYG00000001873	arf3b	98	45.763
ENSPNYG00000012720	arl5c	92	41.818	ENSPNYG00000018550	arl2	93	43.590
ENSPNYG00000012720	arl5c	95	41.358	ENSPNYG00000006844	-	85	41.718
ENSPNYG00000012720	arl5c	92	38.411	ENSPNYG00000000364	arl3l2	88	37.195
ENSPNYG00000012720	arl5c	76	32.061	ENSPNYG00000007064	rab18a	64	32.061
ENSPNYG00000012720	arl5c	100	47.561	ENSPNYG00000015827	-	98	46.591
ENSPNYG00000012720	arl5c	92	42.384	ENSPNYG00000009889	-	85	40.881
ENSPNYG00000012720	arl5c	89	42.208	ENSPNYG00000002408	-	83	40.719
ENSPNYG00000012720	arl5c	92	37.821	ENSPNYG00000004054	ARL6	92	37.821
ENSPNYG00000012720	arl5c	89	42.763	ENSPNYG00000001516	arl4d	79	42.405
ENSPNYG00000012720	arl5c	85	33.571	ENSPNYG00000021357	-	71	33.571
ENSPNYG00000012720	arl5c	100	71.951	ENSPNYG00000011933	arl5a	98	70.455
ENSPNYG00000012720	arl5c	82	34.074	ENSPNYG00000011603	sar1ab	68	34.074
ENSPNYG00000012720	arl5c	89	41.176	ENSPNYG00000021646	-	84	39.759

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPNYG00000012720	arl5c	100	89.944	ENSAPOG00000005821	arl5c	100	89.944	Acanthochromis_polyacanthus
ENSPNYG00000012720	arl5c	92	97.561	ENSACIG00000008975	arl5c	91	97.561	Amphilophus_citrinellus
ENSPNYG00000012720	arl5c	100	89.944	ENSAOCG00000010448	arl5c	100	89.944	Amphiprion_ocellaris
ENSPNYG00000012720	arl5c	100	89.944	ENSAPEG00000002699	arl5c	100	89.944	Amphiprion_percula
ENSPNYG00000012720	arl5c	100	87.805	ENSATEG00000000181	arl5c	100	87.151	Anabas_testudineus
ENSPNYG00000012720	arl5c	100	100.000	ENSACLG00000000922	arl5c	100	100.000	Astatotilapia_calliptera
ENSPNYG00000012720	arl5c	100	84.358	ENSAMXG00000031771	arl5c	100	84.358	Astyanax_mexicanus
ENSPNYG00000012720	arl5c	100	84.146	ENSCSEG00000009845	arl5c	100	83.240	Cynoglossus_semilaevis
ENSPNYG00000012720	arl5c	100	91.463	ENSCVAG00000012706	arl5c	99	91.011	Cyprinodon_variegatus
ENSPNYG00000012720	arl5c	100	84.358	ENSDARG00000035719	arl5c	100	84.358	Danio_rerio
ENSPNYG00000012720	arl5c	100	87.805	ENSELUG00000016864	arl5c	100	87.151	Esox_lucius
ENSPNYG00000012720	arl5c	100	91.463	ENSFHEG00000013677	arl5c	100	91.061	Fundulus_heteroclitus
ENSPNYG00000012720	arl5c	100	92.073	ENSGAFG00000002547	arl5c	100	91.620	Gambusia_affinis
ENSPNYG00000012720	arl5c	100	92.073	ENSGACG00000009321	arl5c	100	91.061	Gasterosteus_aculeatus
ENSPNYG00000012720	arl5c	100	100.000	ENSHBUG00000007301	arl5c	100	100.000	Haplochromis_burtoni
ENSPNYG00000012720	arl5c	100	83.537	ENSHCOG00000017576	-	100	82.682	Hippocampus_comes
ENSPNYG00000012720	arl5c	100	84.916	ENSIPUG00000023232	arl5c	100	84.916	Ictalurus_punctatus
ENSPNYG00000012720	arl5c	100	91.463	ENSKMAG00000011323	arl5c	100	90.503	Kryptolebias_marmoratus
ENSPNYG00000012720	arl5c	100	89.944	ENSLBEG00000006177	arl5c	86	89.944	Labrus_bergylta
ENSPNYG00000012720	arl5c	100	89.024	ENSMAMG00000022157	arl5c	100	88.268	Mastacembelus_armatus
ENSPNYG00000012720	arl5c	100	100.000	ENSMZEG00005022925	arl5c	100	100.000	Maylandia_zebra
ENSPNYG00000012720	arl5c	92	95.122	ENSMMOG00000020851	arl5c	96	95.122	Mola_mola
ENSPNYG00000012720	arl5c	92	90.244	ENSMALG00000009306	arl5c	93	90.244	Monopterus_albus
ENSPNYG00000012720	arl5c	100	99.441	ENSNBRG00000020245	arl5c	100	99.441	Neolamprologus_brichardi
ENSPNYG00000012720	arl5c	100	99.441	ENSONIG00000000890	arl5c	99	99.441	Oreochromis_niloticus
ENSPNYG00000012720	arl5c	100	84.756	ENSORLG00000002960	arl5c	100	84.756	Oryzias_latipes
ENSPNYG00000012720	arl5c	100	84.756	ENSORLG00020010074	arl5c	100	84.756	Oryzias_latipes_hni
ENSPNYG00000012720	arl5c	100	84.756	ENSORLG00015002752	arl5c	100	84.756	Oryzias_latipes_hsok
ENSPNYG00000012720	arl5c	97	86.127	ENSOMEG00000021718	arl5c	98	86.127	Oryzias_melastigma
ENSPNYG00000012720	arl5c	100	87.195	ENSPKIG00000021727	arl5c	100	86.592	Paramormyrops_kingsleyae
ENSPNYG00000012720	arl5c	100	92.737	ENSPFOG00000007842	arl5c	99	92.737	Poecilia_formosa
ENSPNYG00000012720	arl5c	100	92.683	ENSPLAG00000002394	arl5c	100	92.179	Poecilia_latipinna
ENSPNYG00000012720	arl5c	91	93.252	ENSPMEG00000000631	arl5c	94	93.252	Poecilia_mexicana
ENSPNYG00000012720	arl5c	100	93.296	ENSPREG00000008730	arl5c	100	93.296	Poecilia_reticulata
ENSPNYG00000012720	arl5c	100	83.799	ENSPNAG00000002310	arl5c	100	83.799	Pygocentrus_nattereri
ENSPNYG00000012720	arl5c	100	85.976	ENSSFOG00015023529	arl5c	100	85.475	Scleropages_formosus
ENSPNYG00000012720	arl5c	100	89.944	ENSSMAG00000010552	arl5c	100	89.944	Scophthalmus_maximus
ENSPNYG00000012720	arl5c	100	87.709	ENSSDUG00000022640	arl5c	100	87.709	Seriola_dumerili
ENSPNYG00000012720	arl5c	100	87.709	ENSSLDG00000000728	arl5c	100	87.709	Seriola_lalandi_dorsalis
ENSPNYG00000012720	arl5c	100	89.634	ENSSPAG00000007687	arl5c	100	89.385	Stegastes_partitus
ENSPNYG00000012720	arl5c	100	91.061	ENSTRUG00000022814	arl5c	100	91.061	Takifugu_rubripes
ENSPNYG00000012720	arl5c	100	89.024	ENSTNIG00000003015	arl5c	99	88.827	Tetraodon_nigroviridis
ENSPNYG00000012720	arl5c	100	93.293	ENSXCOG00000017380	arl5c	99	93.258	Xiphophorus_couchianus
ENSPNYG00000012720	arl5c	100	92.683	ENSXMAG00000008447	arl5c	99	92.697	Xiphophorus_maculatus