EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPNYG00000012922 (Gene tree)
Gene ID: 102213100
Gene Symbol: zgc:101559
Alias: -
Full Name: ras-related protein Rab-33B-like
Gene Type: protein_coding
Species: Pundamilia_nyererei
Status: putative
Strand: Plus strand
Length: 3290 bases
Position: chrJH419260.1:1707126-1710415
Accession: 102213100
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPNYP00000017056	MMR_HSR1	PF01926.23	8.3e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPNYT00000017479	-	1177	XM_005733833	ENSPNYP00000017056	234 (aa)	XP_005733890	UPI00022B3F53

Gene Model

Click here to download ENSPNYG00000012922's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPNYG00000012922's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPNYG00000012922	zgc:101559	77	39.560	ENSPNYG00000023905	rab12	73	39.560
ENSPNYG00000012922	zgc:101559	71	34.940	ENSPNYG00000019639	rab23	71	35.811
ENSPNYG00000012922	zgc:101559	67	36.306	ENSPNYG00000013814	KRAS	87	37.059
ENSPNYG00000012922	zgc:101559	73	39.766	ENSPNYG00000010615	rab5c	75	39.766
ENSPNYG00000012922	zgc:101559	73	40.936	ENSPNYG00000010612	rab5aa	77	40.936
ENSPNYG00000012922	zgc:101559	63	35.135	ENSPNYG00000001744	rhebl1	79	35.135
ENSPNYG00000012922	zgc:101559	95	56.054	ENSPNYG00000000044	rab33a	93	56.054
ENSPNYG00000012922	zgc:101559	68	39.634	ENSPNYG00000000233	rab9b	72	39.634
ENSPNYG00000012922	zgc:101559	54	44.444	ENSPNYG00000017153	rab34b	70	44.444
ENSPNYG00000012922	zgc:101559	77	40.884	ENSPNYG00000004098	rab11bb	80	40.884
ENSPNYG00000012922	zgc:101559	79	43.478	ENSPNYG00000009490	si:dkey-16l2.16	88	42.929
ENSPNYG00000012922	zgc:101559	75	47.727	ENSPNYG00000015841	-	83	47.727
ENSPNYG00000012922	zgc:101559	79	38.710	ENSPNYG00000002252	rab11a	86	38.710
ENSPNYG00000012922	zgc:101559	71	41.317	ENSPNYG00000012426	rab2a	76	41.317
ENSPNYG00000012922	zgc:101559	73	40.000	ENSPNYG00000005326	-	77	40.000
ENSPNYG00000012922	zgc:101559	72	41.071	ENSPNYG00000020556	rab6a	78	41.071
ENSPNYG00000012922	zgc:101559	76	34.807	ENSPNYG00000023810	-	77	34.807
ENSPNYG00000012922	zgc:101559	71	30.539	ENSPNYG00000000881	nkiras1	85	30.539
ENSPNYG00000012922	zgc:101559	85	35.749	ENSPNYG00000005809	-	97	35.749
ENSPNYG00000012922	zgc:101559	78	63.874	ENSPNYG00000013054	rab33ba	80	63.874
ENSPNYG00000012922	zgc:101559	70	44.512	ENSPNYG00000004681	-	80	44.512
ENSPNYG00000012922	zgc:101559	64	35.714	ENSPNYG00000011286	rasl11b	73	33.696
ENSPNYG00000012922	zgc:101559	66	43.871	ENSPNYG00000019276	-	72	43.871
ENSPNYG00000012922	zgc:101559	85	36.715	ENSPNYG00000020409	RAB7A	97	36.715
ENSPNYG00000012922	zgc:101559	75	37.143	ENSPNYG00000019963	rab6ba	89	37.143
ENSPNYG00000012922	zgc:101559	74	33.714	ENSPNYG00000015328	RAB9A	78	33.714
ENSPNYG00000012922	zgc:101559	80	37.766	ENSPNYG00000018244	rab11al	84	37.766
ENSPNYG00000012922	zgc:101559	71	40.361	ENSPNYG00000001751	rab18b	79	40.361
ENSPNYG00000012922	zgc:101559	50	30.508	ENSPNYG00000001516	arl4d	58	30.508
ENSPNYG00000012922	zgc:101559	69	43.558	ENSPNYG00000015774	RAB39B	75	43.558
ENSPNYG00000012922	zgc:101559	73	31.765	ENSPNYG00000011135	RAB17	73	31.765
ENSPNYG00000012922	zgc:101559	79	33.333	ENSPNYG00000015124	hrasb	97	33.838
ENSPNYG00000012922	zgc:101559	85	36.946	ENSPNYG00000018613	si:dkey-13a21.4	95	36.946
ENSPNYG00000012922	zgc:101559	73	43.023	ENSPNYG00000022091	RAB15	79	43.023
ENSPNYG00000012922	zgc:101559	63	35.811	ENSPNYG00000006192	rheb	79	35.811
ENSPNYG00000012922	zgc:101559	75	47.727	ENSPNYG00000010377	rab1ba	83	47.727
ENSPNYG00000012922	zgc:101559	73	39.181	ENSPNYG00000015851	-	75	39.181
ENSPNYG00000012922	zgc:101559	78	37.705	ENSPNYG00000018214	rab25b	85	37.705
ENSPNYG00000012922	zgc:101559	68	49.375	ENSPNYG00000007156	rab35b	97	41.117
ENSPNYG00000012922	zgc:101559	81	44.211	ENSPNYG00000008498	-	82	44.211
ENSPNYG00000012922	zgc:101559	75	48.295	ENSPNYG00000009172	rab1ab	82	48.295
ENSPNYG00000012922	zgc:101559	73	40.000	ENSPNYG00000007314	-	77	40.000
ENSPNYG00000012922	zgc:101559	74	41.379	ENSPNYG00000010325	rab42a	64	41.379
ENSPNYG00000012922	zgc:101559	71	39.157	ENSPNYG00000010491	rab25a	77	39.157
ENSPNYG00000012922	zgc:101559	77	36.413	ENSPNYG00000010861	rab6bb	90	36.413
ENSPNYG00000012922	zgc:101559	76	48.315	ENSPNYG00000009728	rab30	77	48.315
ENSPNYG00000012922	zgc:101559	63	40.816	ENSPNYG00000007064	rab18a	71	40.816
ENSPNYG00000012922	zgc:101559	77	40.331	ENSPNYG00000019611	-	80	40.331
ENSPNYG00000012922	zgc:101559	69	36.310	ENSPNYG00000008014	rab32b	76	36.310
ENSPNYG00000012922	zgc:101559	76	39.665	ENSPNYG00000019644	rab11ba	81	39.665
ENSPNYG00000012922	zgc:101559	64	38.961	ENSPNYG00000015355	RAB29	73	38.961
ENSPNYG00000012922	zgc:101559	82	32.057	ENSPNYG00000017665	rasl11a	81	32.057
ENSPNYG00000012922	zgc:101559	67	60.248	ENSPNYG00000003511	-	92	49.550
ENSPNYG00000012922	zgc:101559	84	38.119	ENSPNYG00000000512	rab15	91	38.119
ENSPNYG00000012922	zgc:101559	70	30.539	ENSPNYG00000023681	dnajc27	61	30.539
ENSPNYG00000012922	zgc:101559	77	39.560	ENSPNYG00000005654	rab12	73	39.560
ENSPNYG00000012922	zgc:101559	72	42.262	ENSPNYG00000013288	rab41	77	42.262
ENSPNYG00000012922	zgc:101559	69	35.404	ENSPNYG00000005416	si:ch73-116o1.2	90	34.359
ENSPNYG00000012922	zgc:101559	77	46.961	ENSPNYG00000007520	-	80	46.961

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPNYG00000012922	zgc:101559	100	89.744	ENSAPOG00000007503	zgc:101559	100	89.744	Acanthochromis_polyacanthus
ENSPNYG00000012922	zgc:101559	90	95.238	ENSACIG00000021459	zgc:101559	92	95.238	Amphilophus_citrinellus
ENSPNYG00000012922	zgc:101559	100	89.744	ENSAOCG00000024675	zgc:101559	100	89.744	Amphiprion_ocellaris
ENSPNYG00000012922	zgc:101559	100	89.744	ENSAPEG00000005176	zgc:101559	100	89.744	Amphiprion_percula
ENSPNYG00000012922	zgc:101559	100	88.034	ENSATEG00000007761	zgc:101559	100	88.034	Anabas_testudineus
ENSPNYG00000012922	zgc:101559	98	99.130	ENSACLG00000027006	zgc:101559	97	99.130	Astatotilapia_calliptera
ENSPNYG00000012922	zgc:101559	92	77.828	ENSAMXG00000040460	zgc:101559	88	77.828	Astyanax_mexicanus
ENSPNYG00000012922	zgc:101559	100	81.197	ENSCSEG00000006243	zgc:101559	100	81.197	Cynoglossus_semilaevis
ENSPNYG00000012922	zgc:101559	100	85.043	ENSCVAG00000019227	zgc:101559	100	85.043	Cyprinodon_variegatus
ENSPNYG00000012922	zgc:101559	100	76.596	ENSDARG00000003257	zgc:101559	100	76.596	Danio_rerio
ENSPNYG00000012922	zgc:101559	100	84.615	ENSFHEG00000011483	zgc:101559	100	84.615	Fundulus_heteroclitus
ENSPNYG00000012922	zgc:101559	91	83.099	ENSGMOG00000011665	zgc:101559	100	83.099	Gadus_morhua
ENSPNYG00000012922	zgc:101559	100	82.906	ENSGAFG00000021202	zgc:101559	100	82.906	Gambusia_affinis
ENSPNYG00000012922	zgc:101559	91	85.915	ENSGACG00000001725	zgc:101559	91	85.915	Gasterosteus_aculeatus
ENSPNYG00000012922	zgc:101559	100	100.000	ENSHBUG00000007827	zgc:101559	100	100.000	Haplochromis_burtoni
ENSPNYG00000012922	zgc:101559	100	76.695	ENSHCOG00000009133	zgc:101559	100	78.151	Hippocampus_comes
ENSPNYG00000012922	zgc:101559	100	70.085	ENSIPUG00000022394	zgc:101559	100	70.085	Ictalurus_punctatus
ENSPNYG00000012922	zgc:101559	100	82.553	ENSKMAG00000002862	zgc:101559	100	82.553	Kryptolebias_marmoratus
ENSPNYG00000012922	zgc:101559	100	89.316	ENSLBEG00000025798	zgc:101559	100	89.316	Labrus_bergylta
ENSPNYG00000012922	zgc:101559	86	67.164	ENSLACG00000011557	zgc:101559	87	67.164	Latimeria_chalumnae
ENSPNYG00000012922	zgc:101559	100	70.513	ENSLOCG00000005904	zgc:101559	99	70.513	Lepisosteus_oculatus
ENSPNYG00000012922	zgc:101559	100	89.744	ENSMAMG00000017431	zgc:101559	100	89.744	Mastacembelus_armatus
ENSPNYG00000012922	zgc:101559	100	100.000	ENSMZEG00005021778	zgc:101559	100	100.000	Maylandia_zebra
ENSPNYG00000012922	zgc:101559	100	84.188	ENSMMOG00000019779	zgc:101559	100	84.188	Mola_mola
ENSPNYG00000012922	zgc:101559	100	84.615	ENSMALG00000003712	zgc:101559	100	84.615	Monopterus_albus
ENSPNYG00000012922	zgc:101559	100	99.145	ENSNBRG00000002684	zgc:101559	100	99.145	Neolamprologus_brichardi
ENSPNYG00000012922	zgc:101559	100	100.000	ENSONIG00000006715	-	100	100.000	Oreochromis_niloticus
ENSPNYG00000012922	zgc:101559	100	83.333	ENSORLG00000030642	zgc:101559	100	83.333	Oryzias_latipes
ENSPNYG00000012922	zgc:101559	100	82.479	ENSORLG00020012685	zgc:101559	100	82.479	Oryzias_latipes_hni
ENSPNYG00000012922	zgc:101559	100	82.906	ENSORLG00015016047	zgc:101559	100	82.906	Oryzias_latipes_hsok
ENSPNYG00000012922	zgc:101559	100	85.043	ENSOMEG00000013128	zgc:101559	100	85.043	Oryzias_melastigma
ENSPNYG00000012922	zgc:101559	96	71.429	ENSPKIG00000013397	zgc:101559	94	71.429	Paramormyrops_kingsleyae
ENSPNYG00000012922	zgc:101559	100	85.043	ENSPFOG00000009101	-	100	85.043	Poecilia_formosa
ENSPNYG00000012922	zgc:101559	100	85.043	ENSPLAG00000020627	zgc:101559	100	85.043	Poecilia_latipinna
ENSPNYG00000012922	zgc:101559	100	85.043	ENSPMEG00000010152	zgc:101559	100	85.043	Poecilia_mexicana
ENSPNYG00000012922	zgc:101559	100	84.615	ENSPREG00000007017	zgc:101559	100	84.615	Poecilia_reticulata
ENSPNYG00000012922	zgc:101559	99	75.536	ENSPNAG00000017856	zgc:101559	100	75.536	Pygocentrus_nattereri
ENSPNYG00000012922	zgc:101559	99	69.528	ENSSFOG00015006175	zgc:101559	100	69.528	Scleropages_formosus
ENSPNYG00000012922	zgc:101559	99	83.691	ENSSMAG00000002229	zgc:101559	99	83.691	Scophthalmus_maximus
ENSPNYG00000012922	zgc:101559	100	90.598	ENSSDUG00000008151	zgc:101559	100	90.598	Seriola_dumerili
ENSPNYG00000012922	zgc:101559	100	90.598	ENSSLDG00000019214	zgc:101559	100	90.598	Seriola_lalandi_dorsalis
ENSPNYG00000012922	zgc:101559	100	91.453	ENSSPAG00000006404	zgc:101559	100	91.453	Stegastes_partitus
ENSPNYG00000012922	zgc:101559	100	81.624	ENSTRUG00000009903	zgc:101559	100	81.624	Takifugu_rubripes
ENSPNYG00000012922	zgc:101559	93	82.028	ENSTNIG00000015000	zgc:101559	92	82.028	Tetraodon_nigroviridis
ENSPNYG00000012922	zgc:101559	100	84.615	ENSXCOG00000018683	zgc:101559	100	84.615	Xiphophorus_couchianus
ENSPNYG00000012922	zgc:101559	100	84.615	ENSXMAG00000011171	zgc:101559	100	84.615	Xiphophorus_maculatus