EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPNYG00000013205 (Gene tree)
Gene ID: 102213007
Gene Symbol: -
Alias: -
Full Name: poly(rC) binding protein 3
Gene Type: protein_coding
Species: Pundamilia_nyererei
Status: putative
Strand: Minus strand
Length: 21759 bases
Position: chrJH419276.1:2039292-2061050
Accession: 102213007
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPNYP00000017456	KH_1	PF00013.29	1.2e-50	1	3
ENSPNYP00000017456	KH_1	PF00013.29	1.2e-50	2	3
ENSPNYP00000017456	KH_1	PF00013.29	1.2e-50	3	3
ENSPNYP00000017456	KH_2	PF07650.17	7.4e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPNYT00000017889	-	942	XM_005736875	ENSPNYP00000017456	313 (aa)	XP_005736932	-

Gene Model

Click here to download ENSPNYG00000013205's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPNYG00000013205's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPNYG00000013205	-	88	59.667	ENSPNYG00000019234	pcbp4	67	59.667
ENSPNYG00000013205	-	70	40.741	ENSPNYG00000004552	fubp1	53	40.741
ENSPNYG00000013205	-	97	57.784	ENSPNYG00000003098	-	75	57.784
ENSPNYG00000013205	-	96	75.161	ENSPNYG00000014206	PCBP2	97	75.161
ENSPNYG00000013205	-	82	33.673	ENSPNYG00000001374	khsrp	61	33.673
ENSPNYG00000013205	-	96	94.194	ENSPNYG00000012326	pcbp3	95	94.194
ENSPNYG00000013205	-	90	31.496	ENSPNYG00000022740	igf2bp1	54	30.328
ENSPNYG00000013205	-	76	41.176	ENSPNYG00000014008	KHSRP	50	41.176
ENSPNYG00000013205	-	96	76.206	ENSPNYG00000018792	pcbp2	97	76.206
ENSPNYG00000013205	-	88	39.062	ENSPNYG00000009567	fubp3	73	39.062
ENSPNYG00000013205	-	96	34.646	ENSPNYG00000020180	igf2bp3	59	34.646
ENSPNYG00000013205	-	64	39.683	ENSPNYG00000013607	-	56	39.683
ENSPNYG00000013205	-	83	76.238	ENSPNYG00000004637	zgc:110045	95	76.238
ENSPNYG00000013205	-	90	40.845	ENSPNYG00000015521	nova1	58	40.845
ENSPNYG00000013205	-	74	52.857	ENSPNYG00000005907	hnrpkl	50	52.857

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPNYG00000013205	-	99	95.161	ENSAPOG00000020003	pcbp3	89	95.161	Acanthochromis_polyacanthus
ENSPNYG00000013205	-	100	95.988	ENSAPOG00000016582	-	100	95.988	Acanthochromis_polyacanthus
ENSPNYG00000013205	-	98	88.889	ENSAMEG00000001697	-	99	84.770	Ailuropoda_melanoleuca
ENSPNYG00000013205	-	99	87.537	ENSACIG00000010933	pcbp3	98	87.537	Amphilophus_citrinellus
ENSPNYG00000013205	-	100	96.000	ENSACIG00000002739	-	100	96.000	Amphilophus_citrinellus
ENSPNYG00000013205	-	90	94.539	ENSAOCG00000007806	-	100	94.539	Amphiprion_ocellaris
ENSPNYG00000013205	-	96	94.516	ENSAOCG00000008592	-	98	94.516	Amphiprion_ocellaris
ENSPNYG00000013205	-	100	97.179	ENSAPEG00000005209	-	100	97.179	Amphiprion_percula
ENSPNYG00000013205	-	97	87.202	ENSAPEG00000008011	pcbp3	95	87.202	Amphiprion_percula
ENSPNYG00000013205	-	96	90.154	ENSATEG00000015787	-	100	90.154	Anabas_testudineus
ENSPNYG00000013205	-	100	98.418	ENSATEG00000009833	-	100	98.418	Anabas_testudineus
ENSPNYG00000013205	-	98	90.244	ENSAPLG00000002975	-	98	90.244	Anas_platyrhynchos
ENSPNYG00000013205	-	95	75.000	ENSAPLG00000008951	-	79	75.000	Anas_platyrhynchos
ENSPNYG00000013205	-	98	83.193	ENSACAG00000004607	-	99	83.193	Anolis_carolinensis
ENSPNYG00000013205	-	99	80.938	ENSACAG00000009819	-	99	80.938	Anolis_carolinensis
ENSPNYG00000013205	-	93	79.457	ENSANAG00000030702	-	100	96.218	Aotus_nancymaae
ENSPNYG00000013205	-	99	85.507	ENSACLG00000011835	pcbp3	98	85.507	Astatotilapia_calliptera
ENSPNYG00000013205	-	100	100.000	ENSACLG00000003801	-	100	100.000	Astatotilapia_calliptera
ENSPNYG00000013205	-	95	70.186	ENSAMXG00000001760	zgc:110045	72	70.186	Astyanax_mexicanus
ENSPNYG00000013205	-	96	94.702	ENSAMXG00000013588	-	100	94.702	Astyanax_mexicanus
ENSPNYG00000013205	-	97	88.922	ENSAMXG00000003440	pcbp3	95	88.922	Astyanax_mexicanus
ENSPNYG00000013205	-	90	93.013	ENSCAFG00020019472	-	81	93.013	Canis_lupus_dingo
ENSPNYG00000013205	-	98	94.586	ENSCSAG00000007440	-	89	94.586	Chlorocebus_sabaeus
ENSPNYG00000013205	-	95	94.737	ENSCPBG00000012151	-	99	88.922	Chrysemys_picta_bellii
ENSPNYG00000013205	-	96	80.665	ENSCPBG00000000733	-	73	80.665	Chrysemys_picta_bellii
ENSPNYG00000013205	-	96	95.364	ENSCSEG00000000822	pcbp3	99	95.364	Cynoglossus_semilaevis
ENSPNYG00000013205	-	100	80.531	ENSCSEG00000016984	-	100	80.531	Cynoglossus_semilaevis
ENSPNYG00000013205	-	97	86.905	ENSCVAG00000014482	pcbp3	95	86.905	Cyprinodon_variegatus
ENSPNYG00000013205	-	100	96.552	ENSCVAG00000005262	-	100	96.552	Cyprinodon_variegatus
ENSPNYG00000013205	-	100	89.826	ENSDARG00000054378	pcbp3	100	89.826	Danio_rerio
ENSPNYG00000013205	-	98	82.803	ENSETEG00000015988	-	98	82.803	Echinops_telfairi
ENSPNYG00000013205	-	89	74.286	ENSEBUG00000016192	pcbp3	99	74.721	Eptatretus_burgeri
ENSPNYG00000013205	-	91	68.421	ENSEBUG00000005495	pcbp3	74	68.421	Eptatretus_burgeri
ENSPNYG00000013205	-	97	78.864	ENSEBUG00000007485	-	92	78.539	Eptatretus_burgeri
ENSPNYG00000013205	-	97	95.177	ENSELUG00000001560	-	99	85.920	Esox_lucius
ENSPNYG00000013205	-	98	90.645	ENSELUG00000003521	pcbp3	98	90.645	Esox_lucius
ENSPNYG00000013205	-	95	75.284	ENSFALG00000004411	-	74	75.284	Ficedula_albicollis
ENSPNYG00000013205	-	98	93.631	ENSFALG00000003949	-	98	93.631	Ficedula_albicollis
ENSPNYG00000013205	-	97	96.393	ENSFHEG00000016615	pcbp3	96	96.393	Fundulus_heteroclitus
ENSPNYG00000013205	-	100	96.865	ENSFHEG00000006539	-	100	96.865	Fundulus_heteroclitus
ENSPNYG00000013205	-	97	78.507	ENSGMOG00000011992	pcbp3	97	78.507	Gadus_morhua
ENSPNYG00000013205	-	96	70.393	ENSGMOG00000008611	-	100	70.393	Gadus_morhua
ENSPNYG00000013205	-	97	81.902	ENSGALG00000013155	-	99	81.902	Gallus_gallus
ENSPNYG00000013205	-	98	83.099	ENSGALG00000004394	-	98	88.587	Gallus_gallus
ENSPNYG00000013205	-	97	95.820	ENSGAFG00000010274	-	95	95.820	Gambusia_affinis
ENSPNYG00000013205	-	100	85.630	ENSGAFG00000011430	pcbp3	99	85.630	Gambusia_affinis
ENSPNYG00000013205	-	100	77.198	ENSGACG00000014955	-	100	77.198	Gasterosteus_aculeatus
ENSPNYG00000013205	-	100	89.474	ENSGACG00000002266	-	100	89.474	Gasterosteus_aculeatus
ENSPNYG00000013205	-	85	88.764	ENSGAGG00000000271	-	100	88.764	Gopherus_agassizii
ENSPNYG00000013205	-	77	89.130	ENSGAGG00000006956	-	76	89.130	Gopherus_agassizii
ENSPNYG00000013205	-	96	93.871	ENSHBUG00000010697	pcbp3	98	93.871	Haplochromis_burtoni
ENSPNYG00000013205	-	100	100.000	ENSHBUG00000021782	-	100	100.000	Haplochromis_burtoni
ENSPNYG00000013205	-	100	90.654	ENSHCOG00000006067	-	100	90.654	Hippocampus_comes
ENSPNYG00000013205	-	97	87.164	ENSHCOG00000017868	pcbp3	95	87.164	Hippocampus_comes
ENSPNYG00000013205	-	100	97.764	ENSIPUG00000006238	pcbp3	100	97.764	Ictalurus_punctatus
ENSPNYG00000013205	-	97	87.202	ENSKMAG00000003046	pcbp3	95	87.202	Kryptolebias_marmoratus
ENSPNYG00000013205	-	97	94.855	ENSKMAG00000018530	-	100	89.877	Kryptolebias_marmoratus
ENSPNYG00000013205	-	99	94.249	ENSLBEG00000006201	pcbp3	98	94.249	Labrus_bergylta
ENSPNYG00000013205	-	100	83.282	ENSLBEG00000006542	-	100	83.282	Labrus_bergylta
ENSPNYG00000013205	-	96	75.071	ENSLACG00000010804	zgc:110045	74	75.071	Latimeria_chalumnae
ENSPNYG00000013205	-	95	81.143	ENSLACG00000010386	pcbp3	74	81.143	Latimeria_chalumnae
ENSPNYG00000013205	-	95	80.734	ENSLOCG00000005058	zgc:110045	80	80.734	Lepisosteus_oculatus
ENSPNYG00000013205	-	98	89.222	ENSLOCG00000009369	pcbp3	99	89.222	Lepisosteus_oculatus
ENSPNYG00000013205	-	100	97.152	ENSMAMG00000011620	-	100	97.152	Mastacembelus_armatus
ENSPNYG00000013205	-	97	96.066	ENSMAMG00000022336	pcbp3	94	96.066	Mastacembelus_armatus
ENSPNYG00000013205	-	97	91.720	ENSMZEG00005014882	-	100	88.012	Maylandia_zebra
ENSPNYG00000013205	-	99	86.006	ENSMZEG00005008993	pcbp3	98	86.826	Maylandia_zebra
ENSPNYG00000013205	-	95	75.284	ENSMGAG00000006794	-	74	75.284	Meleagris_gallopavo
ENSPNYG00000013205	-	94	78.841	ENSMGAG00000001883	-	95	79.130	Meleagris_gallopavo
ENSPNYG00000013205	-	100	98.403	ENSMMOG00000005216	-	100	98.403	Mola_mola
ENSPNYG00000013205	-	96	91.987	ENSMMOG00000000730	pcbp3	88	91.987	Mola_mola
ENSPNYG00000013205	-	73	77.103	ENSMODG00000027884	-	93	77.103	Monodelphis_domestica
ENSPNYG00000013205	-	96	89.846	ENSMALG00000000691	pcbp3	95	89.846	Monopterus_albus
ENSPNYG00000013205	-	98	85.886	ENSMPUG00000001779	-	90	85.886	Mustela_putorius_furo
ENSPNYG00000013205	-	99	87.761	ENSNBRG00000016409	-	98	87.761	Neolamprologus_brichardi
ENSPNYG00000013205	-	97	92.357	ENSNBRG00000016714	-	99	90.712	Neolamprologus_brichardi
ENSPNYG00000013205	-	95	82.849	ENSOPRG00000003431	-	99	82.849	Ochotona_princeps
ENSPNYG00000013205	-	96	82.436	ENSONIG00000012122	-	98	82.436	Oreochromis_niloticus
ENSPNYG00000013205	-	100	97.508	ENSONIG00000004611	-	100	97.508	Oreochromis_niloticus
ENSPNYG00000013205	-	98	93.631	ENSOCUG00000002696	-	89	93.631	Oryctolagus_cuniculus
ENSPNYG00000013205	-	100	96.262	ENSORLG00000022739	-	100	96.262	Oryzias_latipes
ENSPNYG00000013205	-	96	94.516	ENSORLG00000000059	pcbp3	100	94.516	Oryzias_latipes
ENSPNYG00000013205	-	100	98.403	ENSORLG00020006124	-	100	98.403	Oryzias_latipes_hni
ENSPNYG00000013205	-	96	94.516	ENSORLG00020012671	pcbp3	97	94.516	Oryzias_latipes_hni
ENSPNYG00000013205	-	96	94.516	ENSORLG00015000429	pcbp3	97	94.516	Oryzias_latipes_hsok
ENSPNYG00000013205	-	99	94.375	ENSORLG00015008051	-	98	94.375	Oryzias_latipes_hsok
ENSPNYG00000013205	-	100	98.083	ENSOMEG00000020162	-	100	98.083	Oryzias_melastigma
ENSPNYG00000013205	-	92	95.122	ENSOMEG00000020811	pcbp3	98	95.122	Oryzias_melastigma
ENSPNYG00000013205	-	98	81.389	ENSOGAG00000008044	-	99	81.389	Otolemur_garnettii
ENSPNYG00000013205	-	78	87.912	ENSPKIG00000020913	-	82	87.912	Paramormyrops_kingsleyae
ENSPNYG00000013205	-	100	96.825	ENSPKIG00000019329	pcbp3	100	96.825	Paramormyrops_kingsleyae
ENSPNYG00000013205	-	98	80.967	ENSPSIG00000014970	-	98	81.571	Pelodiscus_sinensis
ENSPNYG00000013205	-	71	80.488	ENSPSIG00000008350	-	68	80.488	Pelodiscus_sinensis
ENSPNYG00000013205	-	96	87.651	ENSPMGG00000022383	pcbp3	95	87.651	Periophthalmus_magnuspinnatus
ENSPNYG00000013205	-	77	84.043	ENSPMAG00000004637	-	97	84.043	Petromyzon_marinus
ENSPNYG00000013205	-	97	72.013	ENSPMAG00000004551	pcbp3	91	72.013	Petromyzon_marinus
ENSPNYG00000013205	-	98	87.834	ENSPCIG00000028092	-	99	87.834	Phascolarctos_cinereus
ENSPNYG00000013205	-	100	81.461	ENSPLAG00000011449	pcbp3	91	81.461	Poecilia_latipinna
ENSPNYG00000013205	-	99	94.410	ENSPLAG00000004074	-	92	94.410	Poecilia_latipinna
ENSPNYG00000013205	-	99	91.045	ENSPMEG00000006653	-	99	91.045	Poecilia_mexicana
ENSPNYG00000013205	-	100	85.294	ENSPMEG00000021239	pcbp3	95	86.905	Poecilia_mexicana
ENSPNYG00000013205	-	96	94.737	ENSPREG00000015736	pcbp3	99	94.737	Poecilia_reticulata
ENSPNYG00000013205	-	100	98.403	ENSPREG00000020585	-	100	98.403	Poecilia_reticulata
ENSPNYG00000013205	-	96	95.333	ENSPNAG00000008541	-	98	95.333	Pygocentrus_nattereri
ENSPNYG00000013205	-	100	95.950	ENSPNAG00000015104	pcbp3	100	95.950	Pygocentrus_nattereri
ENSPNYG00000013205	-	98	94.268	ENSRNOG00000001245	Pcbp3	98	94.268	Rattus_norvegicus
ENSPNYG00000013205	-	98	84.969	ENSRBIG00000028177	-	90	84.969	Rhinopithecus_bieti
ENSPNYG00000013205	-	98	88.323	ENSSHAG00000007890	-	99	88.323	Sarcophilus_harrisii
ENSPNYG00000013205	-	97	95.498	ENSSFOG00015010205	pcbp3	95	95.498	Scleropages_formosus
ENSPNYG00000013205	-	97	83.654	ENSSFOG00015007118	-	95	83.654	Scleropages_formosus
ENSPNYG00000013205	-	97	86.826	ENSSFOG00015014706	pcbp3	95	86.826	Scleropages_formosus
ENSPNYG00000013205	-	96	97.020	ENSSMAG00000011929	pcbp3	97	97.020	Scophthalmus_maximus
ENSPNYG00000013205	-	100	96.855	ENSSMAG00000003135	-	100	96.855	Scophthalmus_maximus
ENSPNYG00000013205	-	97	92.605	ENSSDUG00000008502	-	95	92.605	Seriola_dumerili
ENSPNYG00000013205	-	96	89.297	ENSSDUG00000011608	pcbp3	99	89.297	Seriola_dumerili
ENSPNYG00000013205	-	96	89.297	ENSSLDG00000008518	pcbp3	99	89.297	Seriola_lalandi_dorsalis
ENSPNYG00000013205	-	97	96.463	ENSSLDG00000020161	-	95	96.463	Seriola_lalandi_dorsalis
ENSPNYG00000013205	-	95	76.453	ENSSPUG00000013214	-	88	85.340	Sphenodon_punctatus
ENSPNYG00000013205	-	90	94.881	ENSSPAG00000004190	-	100	94.881	Stegastes_partitus
ENSPNYG00000013205	-	97	77.341	ENSSPAG00000023341	-	95	77.341	Stegastes_partitus
ENSPNYG00000013205	-	98	86.228	ENSTGUG00000003316	-	99	86.228	Taeniopygia_guttata
ENSPNYG00000013205	-	98	86.943	ENSTGUG00000008158	-	99	86.943	Taeniopygia_guttata
ENSPNYG00000013205	-	97	91.022	ENSTRUG00000013604	pcbp3	95	91.022	Takifugu_rubripes
ENSPNYG00000013205	-	99	92.628	ENSTRUG00000006280	-	99	92.628	Takifugu_rubripes
ENSPNYG00000013205	-	98	81.793	ENSTTRG00000015075	-	99	81.793	Tursiops_truncatus
ENSPNYG00000013205	-	98	86.826	ENSXETG00000011483	pcbp1	99	86.826	Xenopus_tropicalis
ENSPNYG00000013205	-	89	75.610	ENSXETG00000010491	pcbp2	72	75.610	Xenopus_tropicalis
ENSPNYG00000013205	-	96	86.905	ENSXCOG00000020481	pcbp3	95	86.905	Xiphophorus_couchianus
ENSPNYG00000013205	-	97	87.202	ENSXMAG00000008175	pcbp3	95	87.202	Xiphophorus_maculatus
ENSPNYG00000013205	-	97	96.141	ENSXMAG00000028711	-	100	91.940	Xiphophorus_maculatus