EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPNYG00000013428 (Gene tree)
Gene ID: 102194051
Gene Symbol: cmss1
Alias: zgc:101814
Full Name: cms1 ribosomal small subunit homolog
Gene Type: protein_coding
Species: Pundamilia_nyererei
Status: putative
Strand: Minus strand
Length: 27426 bases
Position: chrJH419260.1:2064022-2091447
Accession: 102194051
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPNYP00000017751	CMS1	PF14617.6	2.5e-29	1	1
ENSPNYP00000017751	DEAD	PF00270.29	5.9e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPNYT00000018192	-	907	XM_005733852	ENSPNYP00000017751	272 (aa)	XP_005733909	-

Gene Model

Click here to download ENSPNYG00000013428's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPNYG00000013428's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPNYG00000013428	cmss1	97	49.281	ENSG00000184220	CMSS1	98	58.750	Homo_sapiens
ENSPNYG00000013428	cmss1	65	87.006	ENSAPOG00000010604	cmss1	85	72.766	Acanthochromis_polyacanthus
ENSPNYG00000013428	cmss1	79	56.682	ENSAMEG00000004092	CMSS1	68	62.712	Ailuropoda_melanoleuca
ENSPNYG00000013428	cmss1	87	81.780	ENSACIG00000021854	cmss1	88	82.051	Amphilophus_citrinellus
ENSPNYG00000013428	cmss1	97	78.491	ENSAOCG00000013361	cmss1	91	78.491	Amphiprion_ocellaris
ENSPNYG00000013428	cmss1	97	80.000	ENSAPEG00000005829	cmss1	91	79.245	Amphiprion_percula
ENSPNYG00000013428	cmss1	97	77.358	ENSATEG00000008209	cmss1	92	77.528	Anabas_testudineus
ENSPNYG00000013428	cmss1	65	65.909	ENSAPLG00000010542	CMSS1	77	65.909	Anas_platyrhynchos
ENSPNYG00000013428	cmss1	81	59.545	ENSACAG00000011065	CMSS1	64	66.477	Anolis_carolinensis
ENSPNYG00000013428	cmss1	97	49.057	ENSANAG00000023565	CMSS1	91	48.302	Aotus_nancymaae
ENSPNYG00000013428	cmss1	97	99.623	ENSACLG00000027294	cmss1	91	99.623	Astatotilapia_calliptera
ENSPNYG00000013428	cmss1	97	60.821	ENSAMXG00000002046	cmss1	93	60.073	Astyanax_mexicanus
ENSPNYG00000013428	cmss1	97	49.270	ENSBTAG00000013663	CMSS1	91	48.551	Bos_taurus
ENSPNYG00000013428	cmss1	97	51.698	ENSCJAG00000000610	CMSS1	91	51.321	Callithrix_jacchus
ENSPNYG00000013428	cmss1	79	56.944	ENSCAFG00000009230	CMSS1	64	63.636	Canis_familiaris
ENSPNYG00000013428	cmss1	65	63.636	ENSCAFG00020024156	-	55	63.636	Canis_lupus_dingo
ENSPNYG00000013428	cmss1	79	56.944	ENSCAFG00020009464	-	64	63.636	Canis_lupus_dingo
ENSPNYG00000013428	cmss1	65	61.932	ENSCHIG00000013003	CMSS1	64	61.932	Capra_hircus
ENSPNYG00000013428	cmss1	79	56.481	ENSTSYG00000009266	CMSS1	68	63.636	Carlito_syrichta
ENSPNYG00000013428	cmss1	59	54.375	ENSCAPG00000013584	CMSS1	75	54.375	Cavia_aperea
ENSPNYG00000013428	cmss1	97	52.830	ENSCPOG00000014680	CMSS1	91	51.698	Cavia_porcellus
ENSPNYG00000013428	cmss1	97	51.321	ENSCCAG00000034685	CMSS1	91	50.566	Cebus_capucinus
ENSPNYG00000013428	cmss1	97	50.360	ENSCATG00000031980	CMSS1	91	48.921	Cercocebus_atys
ENSPNYG00000013428	cmss1	64	62.644	ENSCLAG00000011241	CMSS1	76	63.068	Chinchilla_lanigera
ENSPNYG00000013428	cmss1	65	64.205	ENSCSAG00000006024	CMSS1	72	64.205	Chlorocebus_sabaeus
ENSPNYG00000013428	cmss1	97	37.358	ENSCHOG00000012098	CMSS1	91	36.226	Choloepus_hoffmanni
ENSPNYG00000013428	cmss1	59	44.172	ENSCING00000014848	-	85	44.375	Ciona_intestinalis
ENSPNYG00000013428	cmss1	97	50.000	ENSCANG00000031337	CMSS1	91	48.561	Colobus_angolensis_palliatus
ENSPNYG00000013428	cmss1	97	49.434	ENSCGRG00001014305	Cmss1	91	49.811	Cricetulus_griseus_chok1gshd
ENSPNYG00000013428	cmss1	65	62.500	ENSCGRG00000006722	Cmss1	68	62.500	Cricetulus_griseus_crigri
ENSPNYG00000013428	cmss1	97	68.750	ENSCSEG00000004958	cmss1	91	70.221	Cynoglossus_semilaevis
ENSPNYG00000013428	cmss1	97	72.932	ENSCVAG00000005039	cmss1	91	72.556	Cyprinodon_variegatus
ENSPNYG00000013428	cmss1	97	60.821	ENSDARG00000112579	cmss1	91	60.148	Danio_rerio
ENSPNYG00000013428	cmss1	65	62.500	ENSDNOG00000040418	CMSS1	64	62.500	Dasypus_novemcinctus
ENSPNYG00000013428	cmss1	97	52.075	ENSDORG00000010461	Cmss1	91	49.275	Dipodomys_ordii
ENSPNYG00000013428	cmss1	64	62.069	ENSEASG00005010966	CMSS1	80	62.500	Equus_asinus_asinus
ENSPNYG00000013428	cmss1	64	61.494	ENSECAG00000015662	CMSS1	78	61.932	Equus_caballus
ENSPNYG00000013428	cmss1	64	43.678	ENSEEUG00000007624	-	66	44.022	Erinaceus_europaeus
ENSPNYG00000013428	cmss1	97	60.507	ENSELUG00000019459	cmss1	91	60.289	Esox_lucius
ENSPNYG00000013428	cmss1	97	51.698	ENSFCAG00000044577	CMSS1	91	50.943	Felis_catus
ENSPNYG00000013428	cmss1	65	65.341	ENSFALG00000005816	CMSS1	74	65.341	Ficedula_albicollis
ENSPNYG00000013428	cmss1	65	63.636	ENSFDAG00000012577	CMSS1	77	63.636	Fukomys_damarensis
ENSPNYG00000013428	cmss1	75	78.155	ENSFHEG00000012008	cmss1	83	78.218	Fundulus_heteroclitus
ENSPNYG00000013428	cmss1	96	69.084	ENSGMOG00000016729	cmss1	91	68.321	Gadus_morhua
ENSPNYG00000013428	cmss1	65	67.045	ENSGALG00000015267	CMSS1	67	67.045	Gallus_gallus
ENSPNYG00000013428	cmss1	89	76.543	ENSGAFG00000021217	cmss1	89	76.667	Gambusia_affinis
ENSPNYG00000013428	cmss1	96	72.453	ENSGACG00000002798	cmss1	91	72.137	Gasterosteus_aculeatus
ENSPNYG00000013428	cmss1	80	60.829	ENSGAGG00000019861	CMSS1	68	65.909	Gopherus_agassizii
ENSPNYG00000013428	cmss1	65	63.636	ENSGGOG00000014125	CMSS1	67	63.636	Gorilla_gorilla
ENSPNYG00000013428	cmss1	97	98.491	ENSHBUG00000008431	cmss1	91	98.491	Haplochromis_burtoni
ENSPNYG00000013428	cmss1	64	63.218	ENSHGLG00000019481	CMSS1	72	63.636	Heterocephalus_glaber_female
ENSPNYG00000013428	cmss1	64	63.218	ENSHGLG00100010314	CMSS1	71	63.636	Heterocephalus_glaber_male
ENSPNYG00000013428	cmss1	97	68.889	ENSHCOG00000003222	cmss1	91	66.914	Hippocampus_comes
ENSPNYG00000013428	cmss1	97	64.045	ENSIPUG00000011591	cmss1	91	61.423	Ictalurus_punctatus
ENSPNYG00000013428	cmss1	97	51.111	ENSSTOG00000019366	CMSS1	91	48.718	Ictidomys_tridecemlineatus
ENSPNYG00000013428	cmss1	97	51.698	ENSJJAG00000014894	Cmss1	78	64.773	Jaculus_jaculus
ENSPNYG00000013428	cmss1	89	66.116	ENSKMAG00000002390	cmss1	88	64.435	Kryptolebias_marmoratus
ENSPNYG00000013428	cmss1	86	68.201	ENSLBEG00000006298	cmss1	81	76.000	Labrus_bergylta
ENSPNYG00000013428	cmss1	65	65.341	ENSLACG00000009293	CMSS1	77	65.341	Latimeria_chalumnae
ENSPNYG00000013428	cmss1	97	55.094	ENSLOCG00000009391	cmss1	91	54.717	Lepisosteus_oculatus
ENSPNYG00000013428	cmss1	64	64.943	ENSLAFG00000017509	CMSS1	77	65.341	Loxodonta_africana
ENSPNYG00000013428	cmss1	97	49.640	ENSMFAG00000045006	CMSS1	91	48.561	Macaca_fascicularis
ENSPNYG00000013428	cmss1	97	49.281	ENSMMUG00000002939	CMSS1	78	63.068	Macaca_mulatta
ENSPNYG00000013428	cmss1	97	49.640	ENSMNEG00000031315	CMSS1	91	48.561	Macaca_nemestrina
ENSPNYG00000013428	cmss1	97	49.640	ENSMLEG00000033660	CMSS1	91	48.561	Mandrillus_leucophaeus
ENSPNYG00000013428	cmss1	97	80.000	ENSMAMG00000017176	cmss1	91	79.623	Mastacembelus_armatus
ENSPNYG00000013428	cmss1	97	99.623	ENSMZEG00005021886	cmss1	91	99.623	Maylandia_zebra
ENSPNYG00000013428	cmss1	65	67.045	ENSMGAG00000014360	CMSS1	77	67.045	Meleagris_gallopavo
ENSPNYG00000013428	cmss1	97	36.604	ENSMAUG00000020609	Cmss1	88	36.226	Mesocricetus_auratus
ENSPNYG00000013428	cmss1	97	52.830	ENSMICG00000048977	CMSS1	91	51.698	Microcebus_murinus
ENSPNYG00000013428	cmss1	97	50.741	ENSMOCG00000021937	Cmss1	91	50.187	Microtus_ochrogaster
ENSPNYG00000013428	cmss1	75	75.962	ENSMMOG00000019794	cmss1	76	82.486	Mola_mola
ENSPNYG00000013428	cmss1	79	55.752	ENSMODG00000002275	CMSS1	73	62.371	Monodelphis_domestica
ENSPNYG00000013428	cmss1	97	79.401	ENSMALG00000004250	cmss1	91	78.195	Monopterus_albus
ENSPNYG00000013428	cmss1	97	53.184	MGP_CAROLIEiJ_G0020824	Cmss1	91	51.698	Mus_caroli
ENSPNYG00000013428	cmss1	97	52.434	ENSMUSG00000022748	Cmss1	91	50.943	Mus_musculus
ENSPNYG00000013428	cmss1	97	52.434	MGP_PahariEiJ_G0016524	Cmss1	91	51.311	Mus_pahari
ENSPNYG00000013428	cmss1	97	52.060	MGP_SPRETEiJ_G0021724	Cmss1	91	50.936	Mus_spretus
ENSPNYG00000013428	cmss1	79	56.944	ENSMPUG00000011324	CMSS1	68	64.205	Mustela_putorius_furo
ENSPNYG00000013428	cmss1	79	56.881	ENSMLUG00000001131	CMSS1	68	64.607	Myotis_lucifugus
ENSPNYG00000013428	cmss1	97	51.321	ENSNGAG00000020316	Cmss1	91	50.943	Nannospalax_galili
ENSPNYG00000013428	cmss1	97	99.245	ENSNBRG00000003095	cmss1	91	99.245	Neolamprologus_brichardi
ENSPNYG00000013428	cmss1	97	50.000	ENSNLEG00000034172	CMSS1	91	49.281	Nomascus_leucogenys
ENSPNYG00000013428	cmss1	63	61.628	ENSMEUG00000014505	CMSS1	64	66.207	Notamacropus_eugenii
ENSPNYG00000013428	cmss1	97	51.119	ENSOPRG00000002986	CMSS1	91	50.182	Ochotona_princeps
ENSPNYG00000013428	cmss1	97	49.811	ENSODEG00000003558	-	90	49.057	Octodon_degus
ENSPNYG00000013428	cmss1	97	46.067	ENSODEG00000001853	-	90	44.528	Octodon_degus
ENSPNYG00000013428	cmss1	97	53.208	ENSODEG00000005226	-	91	52.830	Octodon_degus
ENSPNYG00000013428	cmss1	98	41.729	ENSODEG00000009446	-	90	42.105	Octodon_degus
ENSPNYG00000013428	cmss1	86	97.447	ENSONIG00000006678	cmss1	90	97.447	Oreochromis_niloticus
ENSPNYG00000013428	cmss1	71	62.694	ENSOANG00000007529	CMSS1	76	64.773	Ornithorhynchus_anatinus
ENSPNYG00000013428	cmss1	79	56.481	ENSOCUG00000025366	CMSS1	64	63.068	Oryctolagus_cuniculus
ENSPNYG00000013428	cmss1	97	71.321	ENSORLG00000020340	cmss1	91	71.321	Oryzias_latipes
ENSPNYG00000013428	cmss1	86	61.702	ENSORLG00020012235	cmss1	74	73.446	Oryzias_latipes_hni
ENSPNYG00000013428	cmss1	88	62.241	ENSORLG00015015551	cmss1	66	72.881	Oryzias_latipes_hsok
ENSPNYG00000013428	cmss1	97	73.208	ENSOMEG00000012555	cmss1	91	72.830	Oryzias_melastigma
ENSPNYG00000013428	cmss1	74	58.209	ENSOGAG00000002045	CMSS1	77	63.068	Otolemur_garnettii
ENSPNYG00000013428	cmss1	65	61.582	ENSOARG00000017899	CMSS1	61	61.582	Ovis_aries
ENSPNYG00000013428	cmss1	65	63.636	ENSPPAG00000038515	CMSS1	65	63.636	Pan_paniscus
ENSPNYG00000013428	cmss1	97	51.698	ENSPPRG00000016767	CMSS1	91	50.943	Panthera_pardus
ENSPNYG00000013428	cmss1	97	51.321	ENSPTIG00000018274	CMSS1	91	50.566	Panthera_tigris_altaica
ENSPNYG00000013428	cmss1	97	49.640	ENSPTRG00000015157	CMSS1	91	48.921	Pan_troglodytes
ENSPNYG00000013428	cmss1	65	64.205	ENSPANG00000019980	CMSS1	70	64.205	Papio_anubis
ENSPNYG00000013428	cmss1	97	61.132	ENSPKIG00000012609	cmss1	97	61.423	Paramormyrops_kingsleyae
ENSPNYG00000013428	cmss1	65	67.614	ENSPSIG00000003849	CMSS1	77	67.614	Pelodiscus_sinensis
ENSPNYG00000013428	cmss1	65	80.899	ENSPMGG00000010286	cmss1	78	80.899	Periophthalmus_magnuspinnatus
ENSPNYG00000013428	cmss1	97	51.698	ENSPEMG00000016384	Cmss1	91	50.566	Peromyscus_maniculatus_bairdii
ENSPNYG00000013428	cmss1	65	52.809	ENSPMAG00000001146	cmss1	87	53.107	Petromyzon_marinus
ENSPNYG00000013428	cmss1	79	58.796	ENSPCIG00000015656	CMSS1	67	65.341	Phascolarctos_cinereus
ENSPNYG00000013428	cmss1	97	78.195	ENSPFOG00000016849	cmss1	91	75.940	Poecilia_formosa
ENSPNYG00000013428	cmss1	97	77.820	ENSPLAG00000008323	cmss1	91	75.564	Poecilia_latipinna
ENSPNYG00000013428	cmss1	97	78.195	ENSPMEG00000021020	cmss1	91	76.692	Poecilia_mexicana
ENSPNYG00000013428	cmss1	86	80.000	ENSPREG00000007618	cmss1	81	79.079	Poecilia_reticulata
ENSPNYG00000013428	cmss1	97	50.000	ENSPPYG00000013606	CMSS1	91	49.281	Pongo_abelii
ENSPNYG00000013428	cmss1	97	53.585	ENSPCOG00000020035	CMSS1	91	52.453	Propithecus_coquereli
ENSPNYG00000013428	cmss1	86	49.145	ENSPVAG00000017031	CMSS1	80	46.939	Pteropus_vampyrus
ENSPNYG00000013428	cmss1	97	60.821	ENSPNAG00000007912	cmss1	91	60.448	Pygocentrus_nattereri
ENSPNYG00000013428	cmss1	65	64.205	ENSRNOG00000027888	Cmss1	68	64.205	Rattus_norvegicus
ENSPNYG00000013428	cmss1	97	49.281	ENSRBIG00000037931	CMSS1	91	48.561	Rhinopithecus_bieti
ENSPNYG00000013428	cmss1	97	49.281	ENSRROG00000042910	CMSS1	91	48.561	Rhinopithecus_roxellana
ENSPNYG00000013428	cmss1	65	63.068	ENSSBOG00000030980	CMSS1	67	63.068	Saimiri_boliviensis_boliviensis
ENSPNYG00000013428	cmss1	65	65.341	ENSSHAG00000009321	CMSS1	70	65.341	Sarcophilus_harrisii
ENSPNYG00000013428	cmss1	97	63.670	ENSSFOG00015001509	cmss1	91	61.852	Scleropages_formosus
ENSPNYG00000013428	cmss1	97	75.188	ENSSMAG00000001653	cmss1	91	75.373	Scophthalmus_maximus
ENSPNYG00000013428	cmss1	97	81.579	ENSSDUG00000007719	cmss1	96	79.323	Seriola_dumerili
ENSPNYG00000013428	cmss1	87	75.203	ENSSLDG00000012300	cmss1	86	80.861	Seriola_lalandi_dorsalis
ENSPNYG00000013428	cmss1	86	50.000	ENSSARG00000003584	CMSS1	80	49.145	Sorex_araneus
ENSPNYG00000013428	cmss1	65	64.773	ENSSPUG00000003865	CMSS1	78	64.773	Sphenodon_punctatus
ENSPNYG00000013428	cmss1	92	77.108	ENSSPAG00000019182	cmss1	71	73.140	Stegastes_partitus
ENSPNYG00000013428	cmss1	97	51.698	ENSSSCG00000011970	CMSS1	91	49.275	Sus_scrofa
ENSPNYG00000013428	cmss1	65	65.909	ENSTGUG00000013635	CMSS1	77	65.909	Taeniopygia_guttata
ENSPNYG00000013428	cmss1	97	70.787	ENSTRUG00000015265	cmss1	91	65.568	Takifugu_rubripes
ENSPNYG00000013428	cmss1	65	75.141	ENSTNIG00000002880	cmss1	80	63.866	Tetraodon_nigroviridis
ENSPNYG00000013428	cmss1	65	42.614	ENSTBEG00000016722	CMSS1	63	42.614	Tupaia_belangeri
ENSPNYG00000013428	cmss1	97	50.943	ENSTTRG00000001562	CMSS1	91	49.811	Tursiops_truncatus
ENSPNYG00000013428	cmss1	65	63.636	ENSUAMG00000024209	CMSS1	79	63.636	Ursus_americanus
ENSPNYG00000013428	cmss1	65	63.068	ENSUMAG00000001983	CMSS1	68	63.068	Ursus_maritimus
ENSPNYG00000013428	cmss1	65	62.500	ENSVVUG00000007776	-	69	62.500	Vulpes_vulpes
ENSPNYG00000013428	cmss1	79	57.407	ENSVVUG00000021647	-	72	63.636	Vulpes_vulpes
ENSPNYG00000013428	cmss1	97	55.849	ENSXETG00000011858	cmss1	91	53.208	Xenopus_tropicalis
ENSPNYG00000013428	cmss1	92	74.803	ENSXCOG00000018724	cmss1	82	76.569	Xiphophorus_couchianus
ENSPNYG00000013428	cmss1	88	75.820	ENSXMAG00000011243	cmss1	90	76.569	Xiphophorus_maculatus