EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPNYG00000013542 (Gene tree)
Gene ID: 102195164
Gene Symbol: patz1
Alias: -
Full Name: POZ/BTB and AT hook containing zinc finger 1
Gene Type: protein_coding
Species: Pundamilia_nyererei
Status: putative
Strand: Plus strand
Length: 12663 bases
Position: chrJH419217.1:2756562-2769224
Accession: 102195164
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPNYP00000017923	zf-C2H2	PF00096.26	3.1e-30	1	5
ENSPNYP00000017923	zf-C2H2	PF00096.26	3.1e-30	2	5
ENSPNYP00000017923	zf-C2H2	PF00096.26	3.1e-30	3	5
ENSPNYP00000017923	zf-C2H2	PF00096.26	3.1e-30	4	5
ENSPNYP00000017923	zf-C2H2	PF00096.26	3.1e-30	5	5
ENSPNYP00000017913	zf-C2H2	PF00096.26	8.4e-23	1	4
ENSPNYP00000017913	zf-C2H2	PF00096.26	8.4e-23	2	4
ENSPNYP00000017913	zf-C2H2	PF00096.26	8.4e-23	3	4
ENSPNYP00000017913	zf-C2H2	PF00096.26	8.4e-23	4	4
ENSPNYP00000017923	zf-met	PF12874.7	5.6e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPNYT00000018368	-	2043	-	ENSPNYP00000017923	680 (aa)	-	-
ENSPNYT00000018357	-	5561	XM_005724451	ENSPNYP00000017913	652 (aa)	XP_005724508	UPI0003AF4374

Gene Model

Click here to download ENSPNYG00000013542's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPNYG00000013542's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPNYG00000013542	patz1	61	42.105	ENSPNYG00000003152	ZBTB14	88	42.105
ENSPNYG00000013542	patz1	50	31.579	ENSPNYG00000007756	-	73	33.906
ENSPNYG00000013542	patz1	60	34.016	ENSPNYG00000007972	-	90	32.759
ENSPNYG00000013542	patz1	52	39.881	ENSPNYG00000023736	-	59	37.968
ENSPNYG00000013542	patz1	52	38.739	ENSPNYG00000005671	-	79	32.800
ENSPNYG00000013542	patz1	54	34.641	ENSPNYG00000003392	-	97	33.333
ENSPNYG00000013542	patz1	51	32.212	ENSPNYG00000024244	-	85	32.212
ENSPNYG00000013542	patz1	53	40.719	ENSPNYG00000008731	-	93	40.719
ENSPNYG00000013542	patz1	54	33.005	ENSPNYG00000019368	-	79	35.135
ENSPNYG00000013542	patz1	51	36.691	ENSPNYG00000018779	-	89	36.691
ENSPNYG00000013542	patz1	50	32.886	ENSPNYG00000023088	-	81	36.552
ENSPNYG00000013542	patz1	54	30.070	ENSPNYG00000019343	-	81	35.829
ENSPNYG00000013542	patz1	56	31.855	ENSPNYG00000021795	-	66	31.855
ENSPNYG00000013542	patz1	54	35.961	ENSPNYG00000018920	-	84	35.217
ENSPNYG00000013542	patz1	51	36.184	ENSPNYG00000018422	gfi1b	61	36.184
ENSPNYG00000013542	patz1	73	30.000	ENSPNYG00000019166	zbtb34	86	30.000
ENSPNYG00000013542	patz1	61	33.516	ENSPNYG00000009786	-	52	33.516
ENSPNYG00000013542	patz1	57	36.145	ENSPNYG00000000726	-	69	33.566
ENSPNYG00000013542	patz1	59	32.258	ENSPNYG00000017692	znf646	71	32.258
ENSPNYG00000013542	patz1	64	30.072	ENSPNYG00000005296	-	86	43.373
ENSPNYG00000013542	patz1	54	31.527	ENSPNYG00000001524	ZNF319	82	31.527
ENSPNYG00000013542	patz1	63	36.328	ENSPNYG00000019396	-	97	36.328
ENSPNYG00000013542	patz1	50	32.386	ENSPNYG00000019565	-	93	35.897
ENSPNYG00000013542	patz1	52	31.293	ENSPNYG00000011987	-	68	37.895
ENSPNYG00000013542	patz1	71	31.818	ENSPNYG00000008183	zbtb24	60	31.818
ENSPNYG00000013542	patz1	51	35.172	ENSPNYG00000018616	-	67	34.591
ENSPNYG00000013542	patz1	52	35.965	ENSPNYG00000002699	-	98	36.283
ENSPNYG00000013542	patz1	50	40.116	ENSPNYG00000018372	-	61	40.116
ENSPNYG00000013542	patz1	54	40.952	ENSPNYG00000000343	bcl6ab	51	40.952
ENSPNYG00000013542	patz1	50	37.059	ENSPNYG00000019187	-	90	37.059
ENSPNYG00000013542	patz1	50	30.901	ENSPNYG00000005945	-	70	38.926
ENSPNYG00000013542	patz1	50	31.176	ENSPNYG00000009360	-	58	31.343
ENSPNYG00000013542	patz1	55	40.237	ENSPNYG00000011973	-	85	40.237
ENSPNYG00000013542	patz1	52	30.000	ENSPNYG00000016563	-	94	30.620
ENSPNYG00000013542	patz1	54	31.844	ENSPNYG00000016610	-	81	31.527
ENSPNYG00000013542	patz1	72	31.551	ENSPNYG00000010616	zbtb16a	61	31.551
ENSPNYG00000013542	patz1	58	35.714	ENSPNYG00000012877	znf236	69	35.714
ENSPNYG00000013542	patz1	57	33.803	ENSPNYG00000019820	-	72	33.803
ENSPNYG00000013542	patz1	52	33.190	ENSPNYG00000019503	-	98	31.276
ENSPNYG00000013542	patz1	62	33.051	ENSPNYG00000015803	-	99	31.188
ENSPNYG00000013542	patz1	50	32.857	ENSPNYG00000020245	-	88	31.915
ENSPNYG00000013542	patz1	55	38.012	ENSPNYG00000002684	-	90	38.012
ENSPNYG00000013542	patz1	51	33.143	ENSPNYG00000020737	-	81	33.143
ENSPNYG00000013542	patz1	73	34.247	ENSPNYG00000012572	zbtb17	83	33.333
ENSPNYG00000013542	patz1	60	33.696	ENSPNYG00000019549	-	97	33.696
ENSPNYG00000013542	patz1	59	32.971	ENSPNYG00000022104	-	97	34.524
ENSPNYG00000013542	patz1	52	31.140	ENSPNYG00000022227	-	75	34.454
ENSPNYG00000013542	patz1	65	37.584	ENSPNYG00000002658	zbtb49	62	37.584
ENSPNYG00000013542	patz1	62	35.429	ENSPNYG00000003684	-	95	38.356
ENSPNYG00000013542	patz1	60	32.031	ENSPNYG00000010637	-	76	32.031
ENSPNYG00000013542	patz1	87	32.353	ENSPNYG00000015514	zbtb16b	85	32.353
ENSPNYG00000013542	patz1	50	31.163	ENSPNYG00000005777	-	84	31.841
ENSPNYG00000013542	patz1	56	38.760	ENSPNYG00000022345	znf526	63	38.760
ENSPNYG00000013542	patz1	51	31.731	ENSPNYG00000018597	-	83	39.205
ENSPNYG00000013542	patz1	54	32.143	ENSPNYG00000007814	-	88	32.143
ENSPNYG00000013542	patz1	52	30.603	ENSPNYG00000007781	-	99	34.682
ENSPNYG00000013542	patz1	53	34.337	ENSPNYG00000007597	-	83	34.337
ENSPNYG00000013542	patz1	89	30.120	ENSPNYG00000002412	zbtb41	77	30.120
ENSPNYG00000013542	patz1	52	32.558	ENSPNYG00000019270	znf384l	54	32.558
ENSPNYG00000013542	patz1	51	37.500	ENSPNYG00000007402	hic2	50	44.186
ENSPNYG00000013542	patz1	52	37.778	ENSPNYG00000005202	-	98	37.778
ENSPNYG00000013542	patz1	54	32.075	ENSPNYG00000022271	znf319b	84	32.075
ENSPNYG00000013542	patz1	63	33.557	ENSPNYG00000022279	PRDM15	56	33.557

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPNYG00000013542	patz1	100	58.906	ENSG00000100105	PATZ1	100	59.244	Homo_sapiens
ENSPNYG00000013542	patz1	100	93.725	ENSAPOG00000018447	patz1	100	93.725	Acanthochromis_polyacanthus
ENSPNYG00000013542	patz1	100	59.244	ENSAMEG00000007074	PATZ1	100	59.244	Ailuropoda_melanoleuca
ENSPNYG00000013542	patz1	100	90.789	ENSACIG00000016779	patz1	100	90.789	Amphilophus_citrinellus
ENSPNYG00000013542	patz1	100	92.669	ENSAPEG00000013354	patz1	100	92.669	Amphiprion_percula
ENSPNYG00000013542	patz1	100	91.132	ENSATEG00000011260	patz1	100	89.676	Anabas_testudineus
ENSPNYG00000013542	patz1	88	59.247	ENSAPLG00000003934	PATZ1	99	59.247	Anas_platyrhynchos
ENSPNYG00000013542	patz1	100	58.906	ENSANAG00000029603	PATZ1	100	59.244	Aotus_nancymaae
ENSPNYG00000013542	patz1	100	68.400	ENSAMXG00000002273	patz1	100	65.661	Astyanax_mexicanus
ENSPNYG00000013542	patz1	100	59.046	ENSBTAG00000005478	PATZ1	100	59.244	Bos_taurus
ENSPNYG00000013542	patz1	100	58.906	ENSCJAG00000010978	PATZ1	100	59.244	Callithrix_jacchus
ENSPNYG00000013542	patz1	100	59.046	ENSCAFG00000013087	PATZ1	100	59.244	Canis_familiaris
ENSPNYG00000013542	patz1	100	59.046	ENSCHIG00000020203	PATZ1	100	59.244	Capra_hircus
ENSPNYG00000013542	patz1	100	59.187	ENSTSYG00000033183	PATZ1	100	59.524	Carlito_syrichta
ENSPNYG00000013542	patz1	100	58.906	ENSCCAG00000028772	PATZ1	100	59.244	Cebus_capucinus
ENSPNYG00000013542	patz1	100	58.906	ENSCATG00000006101	PATZ1	100	59.046	Cercocebus_atys
ENSPNYG00000013542	patz1	100	58.391	ENSCPBG00000011277	PATZ1	100	58.391	Chrysemys_picta_bellii
ENSPNYG00000013542	patz1	100	58.906	ENSCANG00000024972	PATZ1	100	59.046	Colobus_angolensis_palliatus
ENSPNYG00000013542	patz1	100	57.622	ENSCGRG00001004071	Patz1	100	57.622	Cricetulus_griseus_chok1gshd
ENSPNYG00000013542	patz1	93	57.824	ENSCGRG00000004814	Patz1	100	57.824	Cricetulus_griseus_crigri
ENSPNYG00000013542	patz1	100	79.023	ENSCSEG00000001385	patz1	100	79.310	Cynoglossus_semilaevis
ENSPNYG00000013542	patz1	100	85.976	ENSCVAG00000007684	patz1	100	86.128	Cyprinodon_variegatus
ENSPNYG00000013542	patz1	100	67.481	ENSDARG00000076584	patz1	100	67.481	Danio_rerio
ENSPNYG00000013542	patz1	89	58.594	ENSDNOG00000003183	PATZ1	100	58.594	Dasypus_novemcinctus
ENSPNYG00000013542	patz1	100	59.187	ENSDORG00000023834	Patz1	100	59.384	Dipodomys_ordii
ENSPNYG00000013542	patz1	100	59.046	ENSECAG00000025030	PATZ1	100	59.384	Equus_caballus
ENSPNYG00000013542	patz1	100	77.030	ENSELUG00000002333	patz1	100	77.030	Esox_lucius
ENSPNYG00000013542	patz1	100	59.046	ENSFCAG00000030253	PATZ1	100	59.244	Felis_catus
ENSPNYG00000013542	patz1	89	59.157	ENSFALG00000007450	PATZ1	100	59.157	Ficedula_albicollis
ENSPNYG00000013542	patz1	97	56.186	ENSFDAG00000005614	PATZ1	100	56.332	Fukomys_damarensis
ENSPNYG00000013542	patz1	100	84.275	ENSFHEG00000014755	patz1	100	84.275	Fundulus_heteroclitus
ENSPNYG00000013542	patz1	100	69.972	ENSGMOG00000001062	patz1	100	70.255	Gadus_morhua
ENSPNYG00000013542	patz1	100	58.310	ENSGALG00000006934	PATZ1	100	58.783	Gallus_gallus
ENSPNYG00000013542	patz1	100	87.768	ENSGAFG00000010053	patz1	100	87.768	Gambusia_affinis
ENSPNYG00000013542	patz1	88	59.187	ENSGAGG00000003214	PATZ1	100	59.187	Gopherus_agassizii
ENSPNYG00000013542	patz1	100	58.906	ENSGGOG00000017171	PATZ1	100	59.244	Gorilla_gorilla
ENSPNYG00000013542	patz1	100	79.573	ENSHCOG00000017644	patz1	93	79.878	Hippocampus_comes
ENSPNYG00000013542	patz1	100	68.283	ENSIPUG00000017653	patz1	99	68.283	Ictalurus_punctatus
ENSPNYG00000013542	patz1	100	58.766	ENSSTOG00000020707	PATZ1	100	58.964	Ictidomys_tridecemlineatus
ENSPNYG00000013542	patz1	100	58.509	ENSJJAG00000015259	Patz1	99	59.659	Jaculus_jaculus
ENSPNYG00000013542	patz1	100	82.698	ENSKMAG00000008157	patz1	100	82.723	Kryptolebias_marmoratus
ENSPNYG00000013542	patz1	100	60.000	ENSLAFG00000002317	PATZ1	100	60.000	Loxodonta_africana
ENSPNYG00000013542	patz1	100	59.046	ENSMFAG00000040968	PATZ1	100	59.187	Macaca_fascicularis
ENSPNYG00000013542	patz1	100	59.046	ENSMNEG00000037588	PATZ1	100	59.187	Macaca_nemestrina
ENSPNYG00000013542	patz1	100	58.906	ENSMLEG00000030938	PATZ1	100	59.046	Mandrillus_leucophaeus
ENSPNYG00000013542	patz1	100	89.587	ENSMAMG00000023652	patz1	100	89.587	Mastacembelus_armatus
ENSPNYG00000013542	patz1	88	56.373	ENSMGAG00000008439	PATZ1	100	56.373	Meleagris_gallopavo
ENSPNYG00000013542	patz1	100	58.766	ENSMAUG00000004129	Patz1	100	58.766	Mesocricetus_auratus
ENSPNYG00000013542	patz1	100	59.187	ENSMICG00000005430	PATZ1	100	59.384	Microcebus_murinus
ENSPNYG00000013542	patz1	100	58.906	ENSMOCG00000014488	Patz1	100	58.906	Microtus_ochrogaster
ENSPNYG00000013542	patz1	100	78.702	ENSMMOG00000021679	patz1	100	78.918	Mola_mola
ENSPNYG00000013542	patz1	100	87.577	ENSMALG00000021172	patz1	100	87.577	Monopterus_albus
ENSPNYG00000013542	patz1	100	59.187	MGP_CAROLIEiJ_G0016007	Patz1	100	59.384	Mus_caroli
ENSPNYG00000013542	patz1	100	59.187	ENSMUSG00000020453	Patz1	100	59.384	Mus_musculus
ENSPNYG00000013542	patz1	100	59.187	MGP_PahariEiJ_G0016884	Patz1	100	59.384	Mus_pahari
ENSPNYG00000013542	patz1	100	59.187	MGP_SPRETEiJ_G0016846	Patz1	100	59.384	Mus_spretus
ENSPNYG00000013542	patz1	100	59.244	ENSMLUG00000009942	PATZ1	100	59.187	Myotis_lucifugus
ENSPNYG00000013542	patz1	100	58.766	ENSNGAG00000010268	Patz1	100	58.964	Nannospalax_galili
ENSPNYG00000013542	patz1	100	96.765	ENSNBRG00000016032	patz1	100	96.765	Neolamprologus_brichardi
ENSPNYG00000013542	patz1	70	58.282	ENSMEUG00000016293	PATZ1	100	58.282	Notamacropus_eugenii
ENSPNYG00000013542	patz1	100	58.906	ENSODEG00000003589	PATZ1	100	59.104	Octodon_degus
ENSPNYG00000013542	patz1	100	99.235	ENSONIG00000004248	patz1	100	99.235	Oreochromis_niloticus
ENSPNYG00000013542	patz1	100	59.661	ENSOANG00000014654	PATZ1	100	59.944	Ornithorhynchus_anatinus
ENSPNYG00000013542	patz1	100	83.537	ENSORLG00020010937	patz1	100	83.537	Oryzias_latipes_hni
ENSPNYG00000013542	patz1	100	83.792	ENSORLG00015007396	patz1	100	83.792	Oryzias_latipes_hsok
ENSPNYG00000013542	patz1	100	85.299	ENSOMEG00000006636	patz1	100	85.299	Oryzias_melastigma
ENSPNYG00000013542	patz1	100	59.187	ENSOGAG00000027905	PATZ1	100	59.524	Otolemur_garnettii
ENSPNYG00000013542	patz1	100	58.906	ENSPPAG00000033227	PATZ1	100	59.244	Pan_paniscus
ENSPNYG00000013542	patz1	100	59.046	ENSPPRG00000001573	PATZ1	100	59.244	Panthera_pardus
ENSPNYG00000013542	patz1	89	59.217	ENSPTIG00000007937	PATZ1	91	59.157	Panthera_tigris_altaica
ENSPNYG00000013542	patz1	100	58.906	ENSPTRG00000014268	PATZ1	100	59.244	Pan_troglodytes
ENSPNYG00000013542	patz1	100	58.906	ENSPANG00000006821	PATZ1	100	59.046	Papio_anubis
ENSPNYG00000013542	patz1	100	72.320	ENSPKIG00000019584	patz1	100	72.320	Paramormyrops_kingsleyae
ENSPNYG00000013542	patz1	64	63.896	ENSPSIG00000011562	-	100	64.029	Pelodiscus_sinensis
ENSPNYG00000013542	patz1	71	58.575	ENSPSIG00000016553	-	85	61.954	Pelodiscus_sinensis
ENSPNYG00000013542	patz1	100	79.009	ENSPMGG00000010196	patz1	100	79.009	Periophthalmus_magnuspinnatus
ENSPNYG00000013542	patz1	100	58.906	ENSPEMG00000005321	Patz1	100	58.906	Peromyscus_maniculatus_bairdii
ENSPNYG00000013542	patz1	100	87.634	ENSPLAG00000010425	patz1	100	87.634	Poecilia_latipinna
ENSPNYG00000013542	patz1	100	87.768	ENSPMEG00000000255	patz1	100	87.768	Poecilia_mexicana
ENSPNYG00000013542	patz1	100	84.241	ENSPREG00000002440	patz1	100	84.670	Poecilia_reticulata
ENSPNYG00000013542	patz1	100	58.906	ENSPPYG00000011732	PATZ1	100	59.244	Pongo_abelii
ENSPNYG00000013542	patz1	100	59.187	ENSPCOG00000019729	PATZ1	100	59.384	Propithecus_coquereli
ENSPNYG00000013542	patz1	100	59.046	ENSPVAG00000001749	PATZ1	100	59.244	Pteropus_vampyrus
ENSPNYG00000013542	patz1	88	64.455	ENSPNAG00000017222	patz1	100	64.455	Pygocentrus_nattereri
ENSPNYG00000013542	patz1	100	58.906	ENSRBIG00000044231	PATZ1	100	59.046	Rhinopithecus_bieti
ENSPNYG00000013542	patz1	100	58.906	ENSRROG00000037155	PATZ1	100	59.046	Rhinopithecus_roxellana
ENSPNYG00000013542	patz1	100	58.906	ENSSBOG00000003894	PATZ1	100	59.244	Saimiri_boliviensis_boliviensis
ENSPNYG00000013542	patz1	82	96.154	ENSSFOG00015013244	patz1	78	96.154	Scleropages_formosus
ENSPNYG00000013542	patz1	99	58.205	ENSSPUG00000015298	PATZ1	97	58.766	Sphenodon_punctatus
ENSPNYG00000013542	patz1	88	59.508	ENSSSCG00000010027	PATZ1	100	59.508	Sus_scrofa
ENSPNYG00000013542	patz1	100	85.755	ENSTRUG00000015366	patz1	100	85.755	Takifugu_rubripes
ENSPNYG00000013542	patz1	100	58.906	ENSTTRG00000010279	PATZ1	100	59.104	Tursiops_truncatus
ENSPNYG00000013542	patz1	100	58.443	ENSUAMG00000015014	PATZ1	100	58.651	Ursus_americanus
ENSPNYG00000013542	patz1	100	56.503	ENSXETG00000004190	patz1	100	57.536	Xenopus_tropicalis
ENSPNYG00000013542	patz1	100	88.379	ENSXMAG00000015531	patz1	100	88.379	Xiphophorus_maculatus