EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPNYG00000013552 (Gene tree)
Gene ID: 102196160
Gene Symbol: rnaseh2b
Alias: zgc:56602
Full Name: ribonuclease H2 subunit B
Gene Type: protein_coding
Species: Pundamilia_nyererei
Status: putative
Strand: Minus strand
Length: 8200 bases
Position: chrJH419260.1:2438007-2446206
Accession: 102196160
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPNYP00000017972	RNase_H2-Ydr279	PF09468.10	1.7e-15	1	1
ENSPNYP00000017955	RNase_H2-Ydr279	PF09468.10	1.7e-15	1	1
ENSPNYP00000017942	RNase_H2-Ydr279	PF09468.10	2e-15	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPNYT00000018387	-	2924	XM_005733860	ENSPNYP00000017942	306 (aa)	XP_005733917	UPI0003AF92C9
ENSPNYT00000018400	-	2846	XM_013911011	ENSPNYP00000017955	280 (aa)	XP_013766465	UPI0006AABDEC
ENSPNYT00000018417	-	864	-	ENSPNYP00000017972	287 (aa)	-	-

Gene Model

Click here to download ENSPNYG00000013552's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPNYG00000013552's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPNYG00000013552	rnaseh2b	89	52.529	ENSG00000136104	RNASEH2B	98	51.092	Homo_sapiens
ENSPNYG00000013552	rnaseh2b	100	85.621	ENSAPOG00000010496	rnaseh2b	100	85.621	Acanthochromis_polyacanthus
ENSPNYG00000013552	rnaseh2b	89	50.769	ENSAMEG00000012040	RNASEH2B	92	50.368	Ailuropoda_melanoleuca
ENSPNYG00000013552	rnaseh2b	100	85.366	ENSACIG00000021991	rnaseh2b	100	85.366	Amphilophus_citrinellus
ENSPNYG00000013552	rnaseh2b	100	85.621	ENSAOCG00000013398	rnaseh2b	100	85.621	Amphiprion_ocellaris
ENSPNYG00000013552	rnaseh2b	100	85.294	ENSAPEG00000006033	rnaseh2b	100	85.294	Amphiprion_percula
ENSPNYG00000013552	rnaseh2b	100	82.680	ENSATEG00000008370	rnaseh2b	100	82.680	Anabas_testudineus
ENSPNYG00000013552	rnaseh2b	85	63.008	ENSAPLG00000008955	RNASEH2B	100	63.004	Anas_platyrhynchos
ENSPNYG00000013552	rnaseh2b	93	55.517	ENSACAG00000011679	RNASEH2B	97	55.517	Anolis_carolinensis
ENSPNYG00000013552	rnaseh2b	91	51.724	ENSANAG00000020662	RNASEH2B	87	51.282	Aotus_nancymaae
ENSPNYG00000013552	rnaseh2b	100	99.673	ENSACLG00000000467	rnaseh2b	100	99.673	Astatotilapia_calliptera
ENSPNYG00000013552	rnaseh2b	99	67.974	ENSAMXG00000014351	rnaseh2b	99	67.974	Astyanax_mexicanus
ENSPNYG00000013552	rnaseh2b	90	49.104	ENSBTAG00000020149	RNASEH2B	90	49.104	Bos_taurus
ENSPNYG00000013552	rnaseh2b	89	51.172	ENSCJAG00000008585	-	95	48.780	Callithrix_jacchus
ENSPNYG00000013552	rnaseh2b	88	42.857	ENSCJAG00000003822	-	90	42.857	Callithrix_jacchus
ENSPNYG00000013552	rnaseh2b	98	46.078	ENSCAFG00000004295	RNASEH2B	93	46.078	Canis_familiaris
ENSPNYG00000013552	rnaseh2b	93	47.917	ENSCAFG00020000250	RNASEH2B	94	47.917	Canis_lupus_dingo
ENSPNYG00000013552	rnaseh2b	89	50.588	ENSCHIG00000018220	RNASEH2B	87	50.187	Capra_hircus
ENSPNYG00000013552	rnaseh2b	80	47.414	ENSCHIG00000012982	-	82	47.414	Capra_hircus
ENSPNYG00000013552	rnaseh2b	92	42.264	ENSTSYG00000031177	-	87	43.071	Carlito_syrichta
ENSPNYG00000013552	rnaseh2b	93	49.813	ENSTSYG00000009176	-	87	50.186	Carlito_syrichta
ENSPNYG00000013552	rnaseh2b	93	42.697	ENSCAPG00000009978	RNASEH2B	91	43.123	Cavia_aperea
ENSPNYG00000013552	rnaseh2b	89	49.225	ENSCPOG00000032527	RNASEH2B	87	48.519	Cavia_porcellus
ENSPNYG00000013552	rnaseh2b	89	51.751	ENSCCAG00000026979	RNASEH2B	100	41.985	Cebus_capucinus
ENSPNYG00000013552	rnaseh2b	91	49.822	ENSCATG00000031336	RNASEH2B	79	49.822	Cercocebus_atys
ENSPNYG00000013552	rnaseh2b	89	52.529	ENSCLAG00000003517	RNASEH2B	74	52.045	Chinchilla_lanigera
ENSPNYG00000013552	rnaseh2b	87	51.373	ENSCSAG00000017701	RNASEH2B	81	50.936	Chlorocebus_sabaeus
ENSPNYG00000013552	rnaseh2b	95	39.796	ENSCHOG00000013688	RNASEH2B	95	41.156	Choloepus_hoffmanni
ENSPNYG00000013552	rnaseh2b	99	57.792	ENSCPBG00000008684	RNASEH2B	95	57.792	Chrysemys_picta_bellii
ENSPNYG00000013552	rnaseh2b	95	33.557	ENSCING00000016454	-	96	33.557	Ciona_intestinalis
ENSPNYG00000013552	rnaseh2b	89	51.154	ENSCANG00000041511	-	87	50.735	Colobus_angolensis_palliatus
ENSPNYG00000013552	rnaseh2b	89	52.918	ENSCGRG00001000611	Rnaseh2b	87	52.788	Cricetulus_griseus_chok1gshd
ENSPNYG00000013552	rnaseh2b	89	52.918	ENSCGRG00000006077	Rnaseh2b	87	52.788	Cricetulus_griseus_crigri
ENSPNYG00000013552	rnaseh2b	100	80.836	ENSCSEG00000004910	rnaseh2b	100	80.836	Cynoglossus_semilaevis
ENSPNYG00000013552	rnaseh2b	100	79.085	ENSCVAG00000005212	rnaseh2b	100	79.085	Cyprinodon_variegatus
ENSPNYG00000013552	rnaseh2b	99	71.895	ENSDARG00000005128	rnaseh2b	99	71.895	Danio_rerio
ENSPNYG00000013552	rnaseh2b	89	49.225	ENSDNOG00000049666	-	87	48.519	Dasypus_novemcinctus
ENSPNYG00000013552	rnaseh2b	89	48.047	ENSDNOG00000034290	-	87	47.761	Dasypus_novemcinctus
ENSPNYG00000013552	rnaseh2b	99	48.026	ENSDORG00000010708	Rnaseh2b	98	48.026	Dipodomys_ordii
ENSPNYG00000013552	rnaseh2b	63	30.168	FBgn0030507	CG11164	52	30.168	Drosophila_melanogaster
ENSPNYG00000013552	rnaseh2b	92	36.842	ENSEBUG00000005965	rnaseh2b	100	36.842	Eptatretus_burgeri
ENSPNYG00000013552	rnaseh2b	89	52.140	ENSEASG00005017323	RNASEH2B	87	51.301	Equus_asinus_asinus
ENSPNYG00000013552	rnaseh2b	89	52.529	ENSECAG00000014262	RNASEH2B	87	51.673	Equus_caballus
ENSPNYG00000013552	rnaseh2b	100	73.616	ENSELUG00000019560	rnaseh2b	100	73.616	Esox_lucius
ENSPNYG00000013552	rnaseh2b	87	50.000	ENSFCAG00000014257	RNASEH2B	82	49.618	Felis_catus
ENSPNYG00000013552	rnaseh2b	93	60.279	ENSFALG00000008435	RNASEH2B	97	60.279	Ficedula_albicollis
ENSPNYG00000013552	rnaseh2b	89	51.362	ENSFDAG00000009920	RNASEH2B	93	50.558	Fukomys_damarensis
ENSPNYG00000013552	rnaseh2b	100	82.353	ENSFHEG00000012160	rnaseh2b	100	82.353	Fundulus_heteroclitus
ENSPNYG00000013552	rnaseh2b	100	69.283	ENSGMOG00000016830	rnaseh2b	100	69.283	Gadus_morhua
ENSPNYG00000013552	rnaseh2b	95	58.163	ENSGALG00000017015	RNASEH2B	100	58.576	Gallus_gallus
ENSPNYG00000013552	rnaseh2b	100	81.046	ENSGAFG00000021222	rnaseh2b	100	81.046	Gambusia_affinis
ENSPNYG00000013552	rnaseh2b	100	77.564	ENSGACG00000002821	rnaseh2b	100	77.564	Gasterosteus_aculeatus
ENSPNYG00000013552	rnaseh2b	91	60.573	ENSGAGG00000014722	RNASEH2B	99	60.573	Gopherus_agassizii
ENSPNYG00000013552	rnaseh2b	89	51.538	ENSGGOG00000001044	RNASEH2B	87	51.103	Gorilla_gorilla
ENSPNYG00000013552	rnaseh2b	100	99.673	ENSHBUG00000006049	rnaseh2b	100	99.673	Haplochromis_burtoni
ENSPNYG00000013552	rnaseh2b	89	51.751	ENSHGLG00100015953	RNASEH2B	91	50.929	Heterocephalus_glaber_male
ENSPNYG00000013552	rnaseh2b	100	76.471	ENSHCOG00000003318	rnaseh2b	100	76.471	Hippocampus_comes
ENSPNYG00000013552	rnaseh2b	100	71.987	ENSIPUG00000023815	rnaseh2b	100	71.987	Ictalurus_punctatus
ENSPNYG00000013552	rnaseh2b	89	52.157	ENSSTOG00000015126	RNASEH2B	91	51.685	Ictidomys_tridecemlineatus
ENSPNYG00000013552	rnaseh2b	89	52.157	ENSJJAG00000013335	Rnaseh2b	93	50.909	Jaculus_jaculus
ENSPNYG00000013552	rnaseh2b	100	82.353	ENSKMAG00000002198	rnaseh2b	100	82.353	Kryptolebias_marmoratus
ENSPNYG00000013552	rnaseh2b	100	81.373	ENSLBEG00000019331	rnaseh2b	100	81.373	Labrus_bergylta
ENSPNYG00000013552	rnaseh2b	73	61.792	ENSLACG00000010782	RNASEH2B	92	61.842	Latimeria_chalumnae
ENSPNYG00000013552	rnaseh2b	100	68.404	ENSLOCG00000009296	rnaseh2b	100	68.404	Lepisosteus_oculatus
ENSPNYG00000013552	rnaseh2b	93	48.315	ENSLAFG00000030158	RNASEH2B	87	48.699	Loxodonta_africana
ENSPNYG00000013552	rnaseh2b	89	52.140	ENSMFAG00000038464	-	87	51.673	Macaca_fascicularis
ENSPNYG00000013552	rnaseh2b	89	47.471	ENSMMUG00000021746	RNASEH2B	86	46.429	Macaca_mulatta
ENSPNYG00000013552	rnaseh2b	89	52.140	ENSMNEG00000030580	RNASEH2B	87	51.673	Macaca_nemestrina
ENSPNYG00000013552	rnaseh2b	89	51.538	ENSMLEG00000043911	-	87	51.103	Mandrillus_leucophaeus
ENSPNYG00000013552	rnaseh2b	100	83.333	ENSMAMG00000017109	rnaseh2b	100	83.333	Mastacembelus_armatus
ENSPNYG00000013552	rnaseh2b	100	94.040	ENSMZEG00005021926	rnaseh2b	100	94.040	Maylandia_zebra
ENSPNYG00000013552	rnaseh2b	85	61.538	ENSMGAG00000015025	RNASEH2B	97	61.151	Meleagris_gallopavo
ENSPNYG00000013552	rnaseh2b	89	52.529	ENSMAUG00000016520	Rnaseh2b	87	52.045	Mesocricetus_auratus
ENSPNYG00000013552	rnaseh2b	89	50.584	ENSMICG00000000528	RNASEH2B	87	50.186	Microcebus_murinus
ENSPNYG00000013552	rnaseh2b	99	79.181	ENSMMOG00000019799	rnaseh2b	99	84.507	Mola_mola
ENSPNYG00000013552	rnaseh2b	98	53.465	ENSMODG00000010775	RNASEH2B	99	53.465	Monodelphis_domestica
ENSPNYG00000013552	rnaseh2b	99	82.295	ENSMALG00000004463	rnaseh2b	100	82.295	Monopterus_albus
ENSPNYG00000013552	rnaseh2b	77	54.955	MGP_CAROLIEiJ_G0019389	Rnaseh2b	85	55.172	Mus_caroli
ENSPNYG00000013552	rnaseh2b	89	53.307	ENSMUSG00000021932	Rnaseh2b	90	51.761	Mus_musculus
ENSPNYG00000013552	rnaseh2b	95	41.018	MGP_PahariEiJ_G0030407	-	95	41.018	Mus_pahari
ENSPNYG00000013552	rnaseh2b	79	45.909	ENSMPUG00000018010	RNASEH2B	90	45.909	Mustela_putorius_furo
ENSPNYG00000013552	rnaseh2b	89	53.282	ENSMLUG00000004065	-	87	52.768	Myotis_lucifugus
ENSPNYG00000013552	rnaseh2b	100	97.712	ENSNBRG00000003253	rnaseh2b	100	97.712	Neolamprologus_brichardi
ENSPNYG00000013552	rnaseh2b	99	48.208	ENSNLEG00000003804	RNASEH2B	98	48.208	Nomascus_leucogenys
ENSPNYG00000013552	rnaseh2b	91	56.061	ENSMEUG00000003665	RNASEH2B	97	55.674	Notamacropus_eugenii
ENSPNYG00000013552	rnaseh2b	56	48.148	ENSOPRG00000003695	-	51	50.617	Ochotona_princeps
ENSPNYG00000013552	rnaseh2b	93	49.306	ENSODEG00000006793	-	93	49.306	Octodon_degus
ENSPNYG00000013552	rnaseh2b	79	45.815	ENSODEG00000005412	-	93	45.815	Octodon_degus
ENSPNYG00000013552	rnaseh2b	100	97.059	ENSONIG00000006657	rnaseh2b	100	97.059	Oreochromis_niloticus
ENSPNYG00000013552	rnaseh2b	90	56.738	ENSOANG00000015537	RNASEH2B	97	56.738	Ornithorhynchus_anatinus
ENSPNYG00000013552	rnaseh2b	94	48.148	ENSOCUG00000008904	RNASEH2B	91	47.423	Oryctolagus_cuniculus
ENSPNYG00000013552	rnaseh2b	99	79.139	ENSORLG00000011850	rnaseh2b	100	79.139	Oryzias_latipes
ENSPNYG00000013552	rnaseh2b	99	79.470	ENSORLG00020012081	rnaseh2b	100	79.470	Oryzias_latipes_hni
ENSPNYG00000013552	rnaseh2b	99	78.808	ENSORLG00015015468	rnaseh2b	100	78.808	Oryzias_latipes_hsok
ENSPNYG00000013552	rnaseh2b	99	79.801	ENSOMEG00000012441	rnaseh2b	100	79.801	Oryzias_melastigma
ENSPNYG00000013552	rnaseh2b	89	51.923	ENSOGAG00000016486	RNASEH2B	91	51.471	Otolemur_garnettii
ENSPNYG00000013552	rnaseh2b	91	50.382	ENSOARG00000008701	RNASEH2B	92	50.365	Ovis_aries
ENSPNYG00000013552	rnaseh2b	89	51.923	ENSPPAG00000026374	RNASEH2B	98	46.256	Pan_paniscus
ENSPNYG00000013552	rnaseh2b	89	49.425	ENSPPRG00000012450	RNASEH2B	89	49.084	Panthera_pardus
ENSPNYG00000013552	rnaseh2b	89	49.808	ENSPTIG00000013918	RNASEH2B	97	49.451	Panthera_tigris_altaica
ENSPNYG00000013552	rnaseh2b	89	51.923	ENSPTRG00000005886	RNASEH2B	95	54.032	Pan_troglodytes
ENSPNYG00000013552	rnaseh2b	89	51.538	ENSPANG00000022424	-	100	42.366	Papio_anubis
ENSPNYG00000013552	rnaseh2b	100	67.427	ENSPKIG00000013386	rnaseh2b	100	67.427	Paramormyrops_kingsleyae
ENSPNYG00000013552	rnaseh2b	66	55.135	ENSPSIG00000002224	RNASEH2B	86	55.135	Pelodiscus_sinensis
ENSPNYG00000013552	rnaseh2b	69	75.758	ENSPMGG00000010299	rnaseh2b	96	75.758	Periophthalmus_magnuspinnatus
ENSPNYG00000013552	rnaseh2b	89	53.307	ENSPEMG00000019721	Rnaseh2b	87	53.137	Peromyscus_maniculatus_bairdii
ENSPNYG00000013552	rnaseh2b	88	54.779	ENSPCIG00000014535	-	92	54.779	Phascolarctos_cinereus
ENSPNYG00000013552	rnaseh2b	100	79.870	ENSPFOG00000016722	rnaseh2b	100	79.870	Poecilia_formosa
ENSPNYG00000013552	rnaseh2b	100	80.065	ENSPLAG00000011755	rnaseh2b	100	80.065	Poecilia_latipinna
ENSPNYG00000013552	rnaseh2b	100	80.392	ENSPMEG00000002721	rnaseh2b	100	80.392	Poecilia_mexicana
ENSPNYG00000013552	rnaseh2b	100	80.719	ENSPREG00000007737	rnaseh2b	100	80.719	Poecilia_reticulata
ENSPNYG00000013552	rnaseh2b	89	51.923	ENSPPYG00000005378	RNASEH2B	87	51.471	Pongo_abelii
ENSPNYG00000013552	rnaseh2b	89	50.388	ENSPCOG00000026623	RNASEH2B	87	50.000	Propithecus_coquereli
ENSPNYG00000013552	rnaseh2b	77	49.107	ENSPVAG00000000508	RNASEH2B	89	48.729	Pteropus_vampyrus
ENSPNYG00000013552	rnaseh2b	99	68.627	ENSPNAG00000024825	rnaseh2b	99	68.627	Pygocentrus_nattereri
ENSPNYG00000013552	rnaseh2b	93	51.311	ENSRNOG00000009192	Rnaseh2b	87	51.673	Rattus_norvegicus
ENSPNYG00000013552	rnaseh2b	89	51.751	ENSRBIG00000028928	-	87	51.301	Rhinopithecus_bieti
ENSPNYG00000013552	rnaseh2b	91	44.275	ENSRBIG00000036017	-	86	44.697	Rhinopithecus_bieti
ENSPNYG00000013552	rnaseh2b	75	39.524	ENSRROG00000044915	-	79	39.810	Rhinopithecus_roxellana
ENSPNYG00000013552	rnaseh2b	89	51.751	ENSRROG00000018808	-	87	51.301	Rhinopithecus_roxellana
ENSPNYG00000013552	rnaseh2b	89	51.751	ENSSBOG00000008081	RNASEH2B	96	51.301	Saimiri_boliviensis_boliviensis
ENSPNYG00000013552	rnaseh2b	100	53.548	ENSSHAG00000016190	RNASEH2B	100	54.221	Sarcophilus_harrisii
ENSPNYG00000013552	rnaseh2b	99	69.608	ENSSFOG00015010190	rnaseh2b	100	69.608	Scleropages_formosus
ENSPNYG00000013552	rnaseh2b	100	81.046	ENSSMAG00000001546	rnaseh2b	100	81.046	Scophthalmus_maximus
ENSPNYG00000013552	rnaseh2b	100	84.641	ENSSDUG00000007567	rnaseh2b	100	84.641	Seriola_dumerili
ENSPNYG00000013552	rnaseh2b	100	81.759	ENSSLDG00000012485	rnaseh2b	100	81.759	Seriola_lalandi_dorsalis
ENSPNYG00000013552	rnaseh2b	90	56.322	ENSSPUG00000006745	-	94	56.322	Sphenodon_punctatus
ENSPNYG00000013552	rnaseh2b	100	84.967	ENSSPAG00000020926	rnaseh2b	100	84.967	Stegastes_partitus
ENSPNYG00000013552	rnaseh2b	89	51.163	ENSSSCG00000024385	RNASEH2B	95	53.252	Sus_scrofa
ENSPNYG00000013552	rnaseh2b	90	62.452	ENSTGUG00000012104	RNASEH2B	100	62.271	Taeniopygia_guttata
ENSPNYG00000013552	rnaseh2b	100	78.105	ENSTRUG00000015098	rnaseh2b	100	78.105	Takifugu_rubripes
ENSPNYG00000013552	rnaseh2b	100	76.623	ENSTNIG00000013861	rnaseh2b	100	76.623	Tetraodon_nigroviridis
ENSPNYG00000013552	rnaseh2b	89	43.411	ENSTTRG00000010761	RNASEH2B	87	44.074	Tursiops_truncatus
ENSPNYG00000013552	rnaseh2b	89	51.362	ENSUAMG00000022849	RNASEH2B	96	50.929	Ursus_americanus
ENSPNYG00000013552	rnaseh2b	89	50.584	ENSUMAG00000018556	RNASEH2B	96	50.186	Ursus_maritimus
ENSPNYG00000013552	rnaseh2b	89	51.562	ENSVPAG00000005679	RNASEH2B	93	51.119	Vicugna_pacos
ENSPNYG00000013552	rnaseh2b	89	50.584	ENSVVUG00000024015	RNASEH2B	80	50.929	Vulpes_vulpes
ENSPNYG00000013552	rnaseh2b	99	54.545	ENSXETG00000020720	rnaseh2b	100	54.545	Xenopus_tropicalis
ENSPNYG00000013552	rnaseh2b	100	79.932	ENSXCOG00000018732	rnaseh2b	100	79.932	Xiphophorus_couchianus
ENSPNYG00000013552	rnaseh2b	100	81.046	ENSXMAG00000022554	rnaseh2b	100	81.046	Xiphophorus_maculatus