EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPNYG00000013589 (Gene tree)
Gene ID: 102208027
Gene Symbol: -
Alias: -
Full Name: PR domain zinc finger protein 12-like
Gene Type: protein_coding
Species: Pundamilia_nyererei
Status: putative
Strand: Minus strand
Length: 5209 bases
Position: chrJH419443.1:297470-302678
Accession: 102208027
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPNYP00000017977	zf-C2H2	PF00096.26	3.9e-12	1	2
ENSPNYP00000017977	zf-C2H2	PF00096.26	3.9e-12	2	2
ENSPNYP00000017977	zf-met	PF12874.7	8.5e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPNYT00000018422	-	1188	XM_005749160	ENSPNYP00000017977	395 (aa)	XP_005749217	UPI0003AFD758

Gene Model

Click here to download ENSPNYG00000013589's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPNYG00000013589's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPNYG00000013589	-	100	76.923	ENSPNYG00000009607	prdm12b	100	76.179
ENSPNYG00000013589	-	74	35.962	ENSPNYG00000001938	prdm14	55	38.662
ENSPNYG00000013589	-	72	42.105	ENSPNYG00000012194	prdm5	98	42.105

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPNYG00000013589	-	86	80.994	ENSG00000130711	PRDM12	88	80.994	Homo_sapiens
ENSPNYG00000013589	-	100	76.904	ENSAPOG00000016051	prdm12b	100	76.658	Acanthochromis_polyacanthus
ENSPNYG00000013589	-	100	69.077	ENSAPOG00000018234	-	100	69.077	Acanthochromis_polyacanthus
ENSPNYG00000013589	-	86	78.886	ENSAMEG00000016234	PRDM12	99	78.886	Ailuropoda_melanoleuca
ENSPNYG00000013589	-	100	88.750	ENSACIG00000005193	-	100	88.000	Amphilophus_citrinellus
ENSPNYG00000013589	-	100	77.475	ENSACIG00000019578	prdm12b	100	77.037	Amphilophus_citrinellus
ENSPNYG00000013589	-	100	77.419	ENSAOCG00000015040	prdm12b	100	77.171	Amphiprion_ocellaris
ENSPNYG00000013589	-	100	83.797	ENSAPEG00000022849	-	99	83.544	Amphiprion_percula
ENSPNYG00000013589	-	100	78.000	ENSAPEG00000015092	prdm12b	100	77.750	Amphiprion_percula
ENSPNYG00000013589	-	100	86.700	ENSATEG00000014595	-	100	86.700	Anabas_testudineus
ENSPNYG00000013589	-	86	80.994	ENSANAG00000020616	PRDM12	95	80.994	Aotus_nancymaae
ENSPNYG00000013589	-	100	99.494	ENSACLG00000007631	-	100	99.494	Astatotilapia_calliptera
ENSPNYG00000013589	-	100	75.758	ENSACLG00000011876	prdm12b	100	74.747	Astatotilapia_calliptera
ENSPNYG00000013589	-	100	77.778	ENSAMXG00000033665	prdm12b	100	78.535	Astyanax_mexicanus
ENSPNYG00000013589	-	100	74.747	ENSAMXG00000008540	PRDM12	100	72.980	Astyanax_mexicanus
ENSPNYG00000013589	-	86	81.871	ENSBTAG00000023797	PRDM12	90	81.871	Bos_taurus
ENSPNYG00000013589	-	86	80.994	ENSCJAG00000020540	PRDM12	90	80.994	Callithrix_jacchus
ENSPNYG00000013589	-	76	82.333	ENSCAFG00000023076	PRDM12	85	85.512	Canis_familiaris
ENSPNYG00000013589	-	86	81.579	ENSCAFG00020024046	PRDM12	89	81.579	Canis_lupus_dingo
ENSPNYG00000013589	-	86	81.579	ENSCHIG00000025005	PRDM12	90	81.579	Capra_hircus
ENSPNYG00000013589	-	88	77.714	ENSCPOG00000005901	PRDM12	95	80.909	Cavia_porcellus
ENSPNYG00000013589	-	86	80.994	ENSCCAG00000037485	PRDM12	89	80.994	Cebus_capucinus
ENSPNYG00000013589	-	86	80.994	ENSCATG00000020327	PRDM12	89	80.994	Cercocebus_atys
ENSPNYG00000013589	-	88	79.943	ENSCLAG00000005499	PRDM12	91	79.943	Chinchilla_lanigera
ENSPNYG00000013589	-	86	80.994	ENSCSAG00000014756	PRDM12	89	80.994	Chlorocebus_sabaeus
ENSPNYG00000013589	-	100	75.758	ENSCPBG00000022628	PRDM12	99	75.000	Chrysemys_picta_bellii
ENSPNYG00000013589	-	86	81.871	ENSCGRG00001015005	Prdm12	89	81.871	Cricetulus_griseus_chok1gshd
ENSPNYG00000013589	-	100	75.628	ENSCVAG00000017166	prdm12b	100	76.190	Cyprinodon_variegatus
ENSPNYG00000013589	-	100	82.963	ENSCVAG00000000944	-	100	82.469	Cyprinodon_variegatus
ENSPNYG00000013589	-	100	79.798	ENSDARG00000007430	prdm12b	100	78.030	Danio_rerio
ENSPNYG00000013589	-	86	81.341	ENSDNOG00000042302	PRDM12	90	81.341	Dasypus_novemcinctus
ENSPNYG00000013589	-	83	63.897	ENSEBUG00000016780	prdm12b	75	63.714	Eptatretus_burgeri
ENSPNYG00000013589	-	88	80.229	ENSEASG00005008472	PRDM12	99	73.485	Equus_asinus_asinus
ENSPNYG00000013589	-	88	80.229	ENSECAG00000005933	PRDM12	99	73.485	Equus_caballus
ENSPNYG00000013589	-	100	72.292	ENSELUG00000013674	PRDM12	100	72.346	Esox_lucius
ENSPNYG00000013589	-	100	79.494	ENSELUG00000009905	prdm12b	100	77.468	Esox_lucius
ENSPNYG00000013589	-	86	81.579	ENSFCAG00000043086	PRDM12	89	81.579	Felis_catus
ENSPNYG00000013589	-	100	77.020	ENSFALG00000001445	PRDM12	89	75.505	Ficedula_albicollis
ENSPNYG00000013589	-	100	75.377	ENSFHEG00000003944	prdm12b	100	75.622	Fundulus_heteroclitus
ENSPNYG00000013589	-	100	85.536	ENSFHEG00000007746	-	100	85.037	Fundulus_heteroclitus
ENSPNYG00000013589	-	100	77.273	ENSGMOG00000011797	prdm12b	100	77.020	Gadus_morhua
ENSPNYG00000013589	-	100	77.020	ENSGALG00000003895	PRDM12	99	75.505	Gallus_gallus
ENSPNYG00000013589	-	100	76.633	ENSGAFG00000010827	prdm12b	99	76.942	Gambusia_affinis
ENSPNYG00000013589	-	100	77.193	ENSGACG00000016713	prdm12b	99	76.190	Gasterosteus_aculeatus
ENSPNYG00000013589	-	100	75.758	ENSGAGG00000014083	PRDM12	99	75.000	Gopherus_agassizii
ENSPNYG00000013589	-	86	80.702	ENSGGOG00000010568	PRDM12	89	80.702	Gorilla_gorilla
ENSPNYG00000013589	-	100	99.494	ENSHBUG00000022537	-	93	99.494	Haplochromis_burtoni
ENSPNYG00000013589	-	100	77.057	ENSHBUG00000022878	prdm12b	100	76.309	Haplochromis_burtoni
ENSPNYG00000013589	-	88	80.229	ENSHGLG00000013939	PRDM12	91	80.516	Heterocephalus_glaber_female
ENSPNYG00000013589	-	86	79.830	ENSHCOG00000003663	prdm12b	100	71.921	Hippocampus_comes
ENSPNYG00000013589	-	100	73.383	ENSHCOG00000021167	-	100	70.896	Hippocampus_comes
ENSPNYG00000013589	-	100	79.545	ENSIPUG00000017053	prdm12b	100	78.535	Ictalurus_punctatus
ENSPNYG00000013589	-	100	72.475	ENSIPUG00000019544	PRDM12	100	72.475	Ictalurus_punctatus
ENSPNYG00000013589	-	86	81.579	ENSSTOG00000005986	PRDM12	85	81.579	Ictidomys_tridecemlineatus
ENSPNYG00000013589	-	86	81.579	ENSJJAG00000005424	Prdm12	98	81.579	Jaculus_jaculus
ENSPNYG00000013589	-	95	83.245	ENSKMAG00000021205	-	95	81.937	Kryptolebias_marmoratus
ENSPNYG00000013589	-	100	72.422	ENSKMAG00000016921	prdm12b	100	72.182	Kryptolebias_marmoratus
ENSPNYG00000013589	-	100	87.561	ENSLBEG00000007776	-	100	87.317	Labrus_bergylta
ENSPNYG00000013589	-	100	78.500	ENSLBEG00000017769	prdm12b	100	77.750	Labrus_bergylta
ENSPNYG00000013589	-	100	75.758	ENSLACG00000017560	PRDM12	99	74.747	Latimeria_chalumnae
ENSPNYG00000013589	-	100	78.030	ENSLOCG00000005429	prdm12b	99	77.778	Lepisosteus_oculatus
ENSPNYG00000013589	-	86	79.827	ENSLAFG00000006979	PRDM12	88	79.827	Loxodonta_africana
ENSPNYG00000013589	-	86	80.994	ENSMFAG00000040322	PRDM12	88	80.994	Macaca_fascicularis
ENSPNYG00000013589	-	86	80.994	ENSMNEG00000037234	PRDM12	89	80.994	Macaca_nemestrina
ENSPNYG00000013589	-	100	87.186	ENSMAMG00000018988	-	100	87.940	Mastacembelus_armatus
ENSPNYG00000013589	-	100	76.179	ENSMAMG00000013212	prdm12b	100	75.931	Mastacembelus_armatus
ENSPNYG00000013589	-	100	99.747	ENSMZEG00005000415	PRDM12	100	99.747	Maylandia_zebra
ENSPNYG00000013589	-	98	76.667	ENSMGAG00000005438	PRDM12	98	75.128	Meleagris_gallopavo
ENSPNYG00000013589	-	100	73.500	ENSMAUG00000013040	Prdm12	89	81.871	Mesocricetus_auratus
ENSPNYG00000013589	-	86	81.579	ENSMICG00000015480	PRDM12	90	81.579	Microcebus_murinus
ENSPNYG00000013589	-	86	82.164	ENSMOCG00000021026	Prdm12	89	82.164	Microtus_ochrogaster
ENSPNYG00000013589	-	100	75.315	ENSMODG00000012108	PRDM12	99	73.804	Monodelphis_domestica
ENSPNYG00000013589	-	85	75.964	ENSMALG00000021901	prdm12b	96	75.227	Monopterus_albus
ENSPNYG00000013589	-	86	81.871	MGP_CAROLIEiJ_G0023414	Prdm12	99	73.737	Mus_caroli
ENSPNYG00000013589	-	86	81.871	ENSMUSG00000079466	Prdm12	99	73.737	Mus_musculus
ENSPNYG00000013589	-	86	81.871	MGP_PahariEiJ_G0024871	Prdm12	99	73.737	Mus_pahari
ENSPNYG00000013589	-	86	81.871	MGP_SPRETEiJ_G0024331	Prdm12	99	73.737	Mus_spretus
ENSPNYG00000013589	-	86	81.579	ENSNGAG00000018480	Prdm12	99	72.727	Nannospalax_galili
ENSPNYG00000013589	-	100	85.823	ENSNBRG00000024312	-	100	85.823	Neolamprologus_brichardi
ENSPNYG00000013589	-	100	76.238	ENSNBRG00000006727	prdm12b	100	76.296	Neolamprologus_brichardi
ENSPNYG00000013589	-	100	67.758	ENSMEUG00000003828	PRDM12	99	66.247	Notamacropus_eugenii
ENSPNYG00000013589	-	86	81.287	ENSOPRG00000008680	PRDM12	98	80.994	Ochotona_princeps
ENSPNYG00000013589	-	86	81.871	ENSODEG00000016282	PRDM12	61	81.871	Octodon_degus
ENSPNYG00000013589	-	63	75.200	ENSOANG00000001043	PRDM12	100	73.600	Ornithorhynchus_anatinus
ENSPNYG00000013589	-	80	80.757	ENSOCUG00000008241	PRDM12	96	81.073	Oryctolagus_cuniculus
ENSPNYG00000013589	-	100	89.250	ENSORLG00000017558	-	100	88.000	Oryzias_latipes
ENSPNYG00000013589	-	100	75.743	ENSORLG00000007114	prdm12b	99	74.010	Oryzias_latipes
ENSPNYG00000013589	-	100	89.277	ENSORLG00020013167	-	100	87.781	Oryzias_latipes_hni
ENSPNYG00000013589	-	100	75.990	ENSORLG00020019565	prdm12b	99	75.000	Oryzias_latipes_hni
ENSPNYG00000013589	-	100	75.682	ENSORLG00015007621	prdm12b	99	74.938	Oryzias_latipes_hsok
ENSPNYG00000013589	-	100	89.000	ENSORLG00015003435	-	100	87.750	Oryzias_latipes_hsok
ENSPNYG00000013589	-	100	87.811	ENSOMEG00000007762	-	100	86.816	Oryzias_melastigma
ENSPNYG00000013589	-	100	73.399	ENSOMEG00000004134	prdm12b	99	73.399	Oryzias_melastigma
ENSPNYG00000013589	-	86	81.579	ENSOGAG00000007557	PRDM12	97	81.579	Otolemur_garnettii
ENSPNYG00000013589	-	77	78.289	ENSPPAG00000031506	-	99	77.097	Pan_paniscus
ENSPNYG00000013589	-	100	67.669	ENSPPRG00000023024	PRDM12	83	74.927	Panthera_pardus
ENSPNYG00000013589	-	86	80.994	ENSPTRG00000021475	PRDM12	89	80.994	Pan_troglodytes
ENSPNYG00000013589	-	86	80.994	ENSPTRG00000043324	-	89	80.994	Pan_troglodytes
ENSPNYG00000013589	-	86	80.994	ENSPANG00000025967	PRDM12	89	80.994	Papio_anubis
ENSPNYG00000013589	-	86	77.616	ENSPKIG00000004305	PRDM12	94	76.608	Paramormyrops_kingsleyae
ENSPNYG00000013589	-	100	78.947	ENSPKIG00000007228	prdm12b	100	78.195	Paramormyrops_kingsleyae
ENSPNYG00000013589	-	100	76.010	ENSPSIG00000006739	PRDM12	99	75.000	Pelodiscus_sinensis
ENSPNYG00000013589	-	100	74.747	ENSPMGG00000008867	prdm12b	99	74.559	Periophthalmus_magnuspinnatus
ENSPNYG00000013589	-	100	80.149	ENSPMGG00000002356	-	100	79.198	Periophthalmus_magnuspinnatus
ENSPNYG00000013589	-	88	80.571	ENSPEMG00000009969	Prdm12	91	80.516	Peromyscus_maniculatus_bairdii
ENSPNYG00000013589	-	100	75.567	ENSPCIG00000024119	PRDM12	99	74.055	Phascolarctos_cinereus
ENSPNYG00000013589	-	100	75.750	ENSPFOG00000019841	prdm12b	100	75.561	Poecilia_formosa
ENSPNYG00000013589	-	100	74.874	ENSPLAG00000016626	prdm12b	99	76.441	Poecilia_latipinna
ENSPNYG00000013589	-	97	75.584	ENSPMEG00000016698	prdm12b	99	76.943	Poecilia_mexicana
ENSPNYG00000013589	-	99	77.436	ENSPREG00000003211	-	97	77.436	Poecilia_reticulata
ENSPNYG00000013589	-	100	75.126	ENSPREG00000015073	prdm12b	99	76.441	Poecilia_reticulata
ENSPNYG00000013589	-	86	80.994	ENSPPYG00000019694	PRDM12	92	80.994	Pongo_abelii
ENSPNYG00000013589	-	86	81.579	ENSPCOG00000022255	PRDM12	89	81.579	Propithecus_coquereli
ENSPNYG00000013589	-	86	81.579	ENSPVAG00000001511	PRDM12	89	81.579	Pteropus_vampyrus
ENSPNYG00000013589	-	100	73.485	ENSPNAG00000013396	PRDM12	100	73.552	Pygocentrus_nattereri
ENSPNYG00000013589	-	100	78.283	ENSPNAG00000024532	prdm12b	100	79.545	Pygocentrus_nattereri
ENSPNYG00000013589	-	86	81.871	ENSRNOG00000009218	Prdm12	99	73.737	Rattus_norvegicus
ENSPNYG00000013589	-	84	80.539	ENSRBIG00000042712	PRDM12	90	78.736	Rhinopithecus_bieti
ENSPNYG00000013589	-	85	80.769	ENSRROG00000043554	PRDM12	99	80.769	Rhinopithecus_roxellana
ENSPNYG00000013589	-	100	75.377	ENSSHAG00000015972	PRDM12	99	73.618	Sarcophilus_harrisii
ENSPNYG00000013589	-	100	73.594	ENSSMAG00000003754	prdm12b	100	73.077	Scophthalmus_maximus
ENSPNYG00000013589	-	100	85.185	ENSSDUG00000019071	-	100	84.691	Seriola_dumerili
ENSPNYG00000013589	-	100	75.610	ENSSDUG00000023498	prdm12b	100	74.453	Seriola_dumerili
ENSPNYG00000013589	-	100	76.658	ENSSLDG00000009557	prdm12b	100	74.510	Seriola_lalandi_dorsalis
ENSPNYG00000013589	-	100	82.620	ENSSLDG00000013562	-	100	82.620	Seriola_lalandi_dorsalis
ENSPNYG00000013589	-	100	77.020	ENSSPUG00000013424	PRDM12	99	75.253	Sphenodon_punctatus
ENSPNYG00000013589	-	100	77.228	ENSSPAG00000018824	prdm12b	100	75.990	Stegastes_partitus
ENSPNYG00000013589	-	100	75.000	ENSSPAG00000022420	-	100	75.990	Stegastes_partitus
ENSPNYG00000013589	-	86	81.579	ENSSSCG00000005703	PRDM12	89	81.579	Sus_scrofa
ENSPNYG00000013589	-	100	76.131	ENSTRUG00000018659	prdm12b	100	75.628	Takifugu_rubripes
ENSPNYG00000013589	-	100	80.101	ENSTRUG00000013239	-	100	80.101	Takifugu_rubripes
ENSPNYG00000013589	-	100	76.382	ENSTNIG00000005859	-	99	75.628	Tetraodon_nigroviridis
ENSPNYG00000013589	-	100	74.874	ENSTNIG00000009020	prdm12b	99	73.684	Tetraodon_nigroviridis
ENSPNYG00000013589	-	86	81.579	ENSUAMG00000009653	PRDM12	90	81.579	Ursus_americanus
ENSPNYG00000013589	-	86	81.579	ENSVVUG00000027662	PRDM12	77	81.579	Vulpes_vulpes
ENSPNYG00000013589	-	100	75.126	ENSXCOG00000002836	prdm12b	99	76.692	Xiphophorus_couchianus
ENSPNYG00000013589	-	100	85.432	ENSXMAG00000028012	-	100	85.926	Xiphophorus_maculatus
ENSPNYG00000013589	-	100	75.126	ENSXMAG00000005537	prdm12b	100	76.692	Xiphophorus_maculatus