EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPNYG00000013690 (Gene tree)
Gene ID: 102201824
Gene Symbol: trmt13
Alias: ccdc76|fe24e02|wu:fe24e02|zgc:110839
Full Name: tRNA methyltransferase 13 homolog
Gene Type: protein_coding
Species: Pundamilia_nyererei
Status: putative
Strand: Plus strand
Length: 5394 bases
Position: chrJH419251.1:3458829-3464222
Accession: 102201824
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPNYP00000018144	TRM13	PF05206.14	7.5e-82	1	1
ENSPNYP00000018153	TRM13	PF05206.14	7.4e-65	1	1
ENSPNYP00000018153	zf-U11-48K	PF05253.12	6.2e-10	1	1
ENSPNYP00000018144	zf-U11-48K	PF05253.12	6.2e-10	1	1
ENSPNYP00000018153	zf-TRM13_CCCH	PF11722.8	5.4e-11	1	1
ENSPNYP00000018144	zf-TRM13_CCCH	PF11722.8	5.4e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPNYT00000018606	-	1284	-	ENSPNYP00000018153	427 (aa)	-	-
ENSPNYT00000018596	-	1287	XM_005732401	ENSPNYP00000018144	428 (aa)	XP_005732458	-

Gene Model

Click here to download ENSPNYG00000013690's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPNYG00000013690's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPNYG00000013690	trmt13	99	51.907	ENSG00000122435	TRMT13	96	51.907	Homo_sapiens
ENSPNYG00000013690	trmt13	99	70.370	ENSAPOG00000015131	trmt13	99	70.988	Acanthochromis_polyacanthus
ENSPNYG00000013690	trmt13	99	52.128	ENSAMEG00000008917	TRMT13	96	52.128	Ailuropoda_melanoleuca
ENSPNYG00000013690	trmt13	100	80.396	ENSACIG00000005804	trmt13	97	80.837	Amphilophus_citrinellus
ENSPNYG00000013690	trmt13	99	70.370	ENSAOCG00000023585	trmt13	99	70.370	Amphiprion_ocellaris
ENSPNYG00000013690	trmt13	99	70.988	ENSAPEG00000004025	trmt13	99	70.988	Amphiprion_percula
ENSPNYG00000013690	trmt13	99	71.584	ENSATEG00000006597	trmt13	97	71.584	Anabas_testudineus
ENSPNYG00000013690	trmt13	88	53.444	ENSAPLG00000014924	TRMT13	98	53.444	Anas_platyrhynchos
ENSPNYG00000013690	trmt13	98	52.802	ENSACAG00000003498	TRMT13	97	52.802	Anolis_carolinensis
ENSPNYG00000013690	trmt13	99	51.907	ENSANAG00000019525	TRMT13	96	51.907	Aotus_nancymaae
ENSPNYG00000013690	trmt13	100	94.420	ENSACLG00000020018	trmt13	100	94.420	Astatotilapia_calliptera
ENSPNYG00000013690	trmt13	99	53.503	ENSAMXG00000017963	trmt13	98	54.565	Astyanax_mexicanus
ENSPNYG00000013690	trmt13	99	52.119	ENSBTAG00000015781	TRMT13	96	52.119	Bos_taurus
ENSPNYG00000013690	trmt13	99	51.907	ENSCJAG00000000200	TRMT13	88	64.706	Callithrix_jacchus
ENSPNYG00000013690	trmt13	68	50.932	ENSCAFG00000020021	TRMT13	99	50.932	Canis_familiaris
ENSPNYG00000013690	trmt13	56	58.025	ENSCAFG00020011572	TRMT13	90	56.604	Canis_lupus_dingo
ENSPNYG00000013690	trmt13	99	52.321	ENSCHIG00000015395	TRMT13	96	52.321	Capra_hircus
ENSPNYG00000013690	trmt13	98	51.599	ENSTSYG00000010811	TRMT13	91	59.783	Carlito_syrichta
ENSPNYG00000013690	trmt13	74	43.881	ENSCAPG00000009085	TRMT13	96	43.931	Cavia_aperea
ENSPNYG00000013690	trmt13	100	51.483	ENSCPOG00000000694	TRMT13	97	51.483	Cavia_porcellus
ENSPNYG00000013690	trmt13	99	51.271	ENSCCAG00000023772	TRMT13	96	51.271	Cebus_capucinus
ENSPNYG00000013690	trmt13	99	52.119	ENSCATG00000033556	TRMT13	96	52.119	Cercocebus_atys
ENSPNYG00000013690	trmt13	90	51.544	ENSCLAG00000008220	TRMT13	99	52.009	Chinchilla_lanigera
ENSPNYG00000013690	trmt13	99	51.907	ENSCSAG00000001506	TRMT13	96	51.907	Chlorocebus_sabaeus
ENSPNYG00000013690	trmt13	99	52.043	ENSCPBG00000026671	TRMT13	96	52.043	Chrysemys_picta_bellii
ENSPNYG00000013690	trmt13	99	51.907	ENSCANG00000034659	TRMT13	96	51.907	Colobus_angolensis_palliatus
ENSPNYG00000013690	trmt13	98	51.717	ENSCGRG00001021601	Trmt13	95	51.717	Cricetulus_griseus_chok1gshd
ENSPNYG00000013690	trmt13	52	50.201	ENSCGRG00000000093	-	96	50.201	Cricetulus_griseus_crigri
ENSPNYG00000013690	trmt13	99	68.934	ENSCSEG00000000591	trmt13	98	68.934	Cynoglossus_semilaevis
ENSPNYG00000013690	trmt13	99	66.809	ENSCVAG00000017342	trmt13	94	66.809	Cyprinodon_variegatus
ENSPNYG00000013690	trmt13	99	55.482	ENSDARG00000102846	trmt13	97	55.482	Danio_rerio
ENSPNYG00000013690	trmt13	56	57.895	ENSDNOG00000001710	TRMT13	80	56.506	Dasypus_novemcinctus
ENSPNYG00000013690	trmt13	99	50.638	ENSDORG00000015808	Trmt13	96	50.638	Dipodomys_ordii
ENSPNYG00000013690	trmt13	99	33.333	FBgn0037435	CG18048	95	33.333	Drosophila_melanogaster
ENSPNYG00000013690	trmt13	99	45.283	ENSETEG00000005819	TRMT13	96	45.283	Echinops_telfairi
ENSPNYG00000013690	trmt13	97	43.833	ENSEBUG00000014444	trmt13	96	43.833	Eptatretus_burgeri
ENSPNYG00000013690	trmt13	99	51.695	ENSEASG00005015918	TRMT13	96	51.695	Equus_asinus_asinus
ENSPNYG00000013690	trmt13	99	51.483	ENSECAG00000022626	TRMT13	96	51.483	Equus_caballus
ENSPNYG00000013690	trmt13	77	58.333	ENSEEUG00000000294	TRMT13	73	58.333	Erinaceus_europaeus
ENSPNYG00000013690	trmt13	99	54.545	ENSELUG00000003803	trmt13	98	55.180	Esox_lucius
ENSPNYG00000013690	trmt13	99	50.636	ENSFCAG00000030618	TRMT13	98	52.113	Felis_catus
ENSPNYG00000013690	trmt13	98	54.031	ENSFALG00000002424	TRMT13	95	54.031	Ficedula_albicollis
ENSPNYG00000013690	trmt13	99	51.483	ENSFDAG00000006342	TRMT13	96	51.483	Fukomys_damarensis
ENSPNYG00000013690	trmt13	82	72.853	ENSFHEG00000022954	trmt13	100	72.494	Fundulus_heteroclitus
ENSPNYG00000013690	trmt13	97	55.634	ENSGMOG00000013223	trmt13	99	55.944	Gadus_morhua
ENSPNYG00000013690	trmt13	97	53.173	ENSGALG00000005290	TRMT13	96	53.145	Gallus_gallus
ENSPNYG00000013690	trmt13	82	66.223	ENSGAFG00000001577	trmt13	83	66.223	Gambusia_affinis
ENSPNYG00000013690	trmt13	99	72.506	ENSGACG00000013428	trmt13	98	73.009	Gasterosteus_aculeatus
ENSPNYG00000013690	trmt13	99	51.502	ENSGAGG00000023303	TRMT13	96	56.827	Gopherus_agassizii
ENSPNYG00000013690	trmt13	99	51.695	ENSGGOG00000005616	TRMT13	96	51.695	Gorilla_gorilla
ENSPNYG00000013690	trmt13	100	95.312	ENSHBUG00000007754	trmt13	100	95.312	Haplochromis_burtoni
ENSPNYG00000013690	trmt13	99	51.064	ENSHGLG00000002164	TRMT13	96	51.064	Heterocephalus_glaber_female
ENSPNYG00000013690	trmt13	99	51.064	ENSHGLG00100001618	TRMT13	96	51.064	Heterocephalus_glaber_male
ENSPNYG00000013690	trmt13	99	55.982	ENSHCOG00000020553	trmt13	99	55.982	Hippocampus_comes
ENSPNYG00000013690	trmt13	99	54.367	ENSIPUG00000024787	trmt13	98	55.895	Ictalurus_punctatus
ENSPNYG00000013690	trmt13	99	50.847	ENSSTOG00000013483	TRMT13	96	50.847	Ictidomys_tridecemlineatus
ENSPNYG00000013690	trmt13	99	51.064	ENSJJAG00000018012	Trmt13	97	51.064	Jaculus_jaculus
ENSPNYG00000013690	trmt13	68	70.903	ENSKMAG00000007639	trmt13	93	70.903	Kryptolebias_marmoratus
ENSPNYG00000013690	trmt13	99	69.397	ENSLBEG00000020238	trmt13	99	69.397	Labrus_bergylta
ENSPNYG00000013690	trmt13	98	53.680	ENSLACG00000013153	TRMT13	99	52.764	Latimeria_chalumnae
ENSPNYG00000013690	trmt13	99	54.409	ENSLOCG00000000418	trmt13	98	54.409	Lepisosteus_oculatus
ENSPNYG00000013690	trmt13	81	53.639	ENSLAFG00000002383	TRMT13	98	53.639	Loxodonta_africana
ENSPNYG00000013690	trmt13	99	51.695	ENSMFAG00000034681	TRMT13	96	51.695	Macaca_fascicularis
ENSPNYG00000013690	trmt13	99	51.695	ENSMMUG00000004243	TRMT13	96	51.695	Macaca_mulatta
ENSPNYG00000013690	trmt13	99	51.695	ENSMNEG00000036102	TRMT13	96	51.695	Macaca_nemestrina
ENSPNYG00000013690	trmt13	99	51.907	ENSMLEG00000034258	TRMT13	96	51.907	Mandrillus_leucophaeus
ENSPNYG00000013690	trmt13	98	76.566	ENSMAMG00000016597	trmt13	96	76.566	Mastacembelus_armatus
ENSPNYG00000013690	trmt13	100	94.196	ENSMZEG00005020959	trmt13	100	94.196	Maylandia_zebra
ENSPNYG00000013690	trmt13	89	53.810	ENSMGAG00000006970	TRMT13	98	53.810	Meleagris_gallopavo
ENSPNYG00000013690	trmt13	98	51.592	ENSMAUG00000010448	Trmt13	95	51.592	Mesocricetus_auratus
ENSPNYG00000013690	trmt13	99	51.907	ENSMICG00000005283	TRMT13	96	51.907	Microcebus_murinus
ENSPNYG00000013690	trmt13	99	52.743	ENSMOCG00000019914	Trmt13	97	52.743	Microtus_ochrogaster
ENSPNYG00000013690	trmt13	58	69.444	ENSMMOG00000007762	trmt13	90	69.444	Mola_mola
ENSPNYG00000013690	trmt13	100	50.104	ENSMODG00000003646	TRMT13	98	50.104	Monodelphis_domestica
ENSPNYG00000013690	trmt13	100	70.429	ENSMALG00000020965	trmt13	98	70.429	Monopterus_albus
ENSPNYG00000013690	trmt13	99	51.483	MGP_CAROLIEiJ_G0025568	Trmt13	100	55.556	Mus_caroli
ENSPNYG00000013690	trmt13	99	51.271	ENSMUSG00000033439	Trmt13	98	56.044	Mus_musculus
ENSPNYG00000013690	trmt13	99	51.483	MGP_PahariEiJ_G0027014	Trmt13	93	57.558	Mus_pahari
ENSPNYG00000013690	trmt13	99	51.820	MGP_SPRETEiJ_G0026518	Trmt13	98	56.044	Mus_spretus
ENSPNYG00000013690	trmt13	82	53.825	ENSMPUG00000002078	-	96	53.825	Mustela_putorius_furo
ENSPNYG00000013690	trmt13	98	52.137	ENSMLUG00000002124	TRMT13	95	52.137	Myotis_lucifugus
ENSPNYG00000013690	trmt13	100	97.892	ENSNBRG00000006783	trmt13	98	97.892	Neolamprologus_brichardi
ENSPNYG00000013690	trmt13	99	51.483	ENSNLEG00000035917	TRMT13	96	51.483	Nomascus_leucogenys
ENSPNYG00000013690	trmt13	55	50.000	ENSMEUG00000013346	-	94	50.000	Notamacropus_eugenii
ENSPNYG00000013690	trmt13	57	56.226	ENSOPRG00000012048	TRMT13	54	56.226	Ochotona_princeps
ENSPNYG00000013690	trmt13	100	93.304	ENSONIG00000004574	trmt13	100	93.304	Oreochromis_niloticus
ENSPNYG00000013690	trmt13	90	52.083	ENSOANG00000012057	TRMT13	97	52.083	Ornithorhynchus_anatinus
ENSPNYG00000013690	trmt13	99	50.851	ENSOCUG00000023095	TRMT13	96	50.851	Oryctolagus_cuniculus
ENSPNYG00000013690	trmt13	99	62.963	ENSORLG00000003320	trmt13	99	64.706	Oryzias_latipes
ENSPNYG00000013690	trmt13	98	65.217	ENSORLG00020005972	trmt13	97	65.217	Oryzias_latipes_hni
ENSPNYG00000013690	trmt13	99	68.122	ENSORLG00015002270	trmt13	99	68.122	Oryzias_latipes_hsok
ENSPNYG00000013690	trmt13	99	68.860	ENSOMEG00000006724	trmt13	94	69.737	Oryzias_melastigma
ENSPNYG00000013690	trmt13	98	51.923	ENSOGAG00000005618	TRMT13	94	51.899	Otolemur_garnettii
ENSPNYG00000013690	trmt13	99	52.321	ENSOARG00000017983	TRMT13	96	52.321	Ovis_aries
ENSPNYG00000013690	trmt13	99	52.119	ENSPPAG00000043736	TRMT13	96	52.119	Pan_paniscus
ENSPNYG00000013690	trmt13	99	50.636	ENSPPRG00000003424	TRMT13	98	52.113	Panthera_pardus
ENSPNYG00000013690	trmt13	99	50.636	ENSPTIG00000018598	TRMT13	98	52.113	Panthera_tigris_altaica
ENSPNYG00000013690	trmt13	98	51.931	ENSPTRG00000001001	TRMT13	95	51.931	Pan_troglodytes
ENSPNYG00000013690	trmt13	99	51.907	ENSPANG00000007598	TRMT13	96	51.907	Papio_anubis
ENSPNYG00000013690	trmt13	99	54.902	ENSPKIG00000001514	trmt13	99	54.902	Paramormyrops_kingsleyae
ENSPNYG00000013690	trmt13	88	50.939	ENSPSIG00000012703	TRMT13	99	50.939	Pelodiscus_sinensis
ENSPNYG00000013690	trmt13	99	61.745	ENSPMGG00000013298	trmt13	94	61.745	Periophthalmus_magnuspinnatus
ENSPNYG00000013690	trmt13	99	51.992	ENSPEMG00000000275	Trmt13	98	51.992	Peromyscus_maniculatus_bairdii
ENSPNYG00000013690	trmt13	98	46.234	ENSPMAG00000000823	trmt13	98	46.234	Petromyzon_marinus
ENSPNYG00000013690	trmt13	98	52.229	ENSPCIG00000007699	TRMT13	97	52.229	Phascolarctos_cinereus
ENSPNYG00000013690	trmt13	97	65.541	ENSPFOG00000008675	trmt13	94	65.541	Poecilia_formosa
ENSPNYG00000013690	trmt13	99	65.208	ENSPLAG00000009709	trmt13	99	65.208	Poecilia_latipinna
ENSPNYG00000013690	trmt13	98	65.132	ENSPMEG00000022954	trmt13	99	65.132	Poecilia_mexicana
ENSPNYG00000013690	trmt13	86	65.985	ENSPREG00000005645	trmt13	95	66.545	Poecilia_reticulata
ENSPNYG00000013690	trmt13	98	51.923	ENSPPYG00000001120	TRMT13	95	51.923	Pongo_abelii
ENSPNYG00000013690	trmt13	99	51.907	ENSPCAG00000002340	TRMT13	96	51.907	Procavia_capensis
ENSPNYG00000013690	trmt13	99	51.271	ENSPCOG00000017984	TRMT13	96	51.271	Propithecus_coquereli
ENSPNYG00000013690	trmt13	99	51.483	ENSPVAG00000017430	TRMT13	96	51.483	Pteropus_vampyrus
ENSPNYG00000013690	trmt13	99	53.030	ENSPNAG00000022130	trmt13	98	53.030	Pygocentrus_nattereri
ENSPNYG00000013690	trmt13	99	51.392	ENSRNOG00000015140	Trmt13	93	51.392	Rattus_norvegicus
ENSPNYG00000013690	trmt13	99	51.907	ENSRBIG00000037686	TRMT13	96	51.907	Rhinopithecus_bieti
ENSPNYG00000013690	trmt13	99	54.324	ENSRROG00000044057	TRMT13	96	54.324	Rhinopithecus_roxellana
ENSPNYG00000013690	trmt13	99	51.907	ENSSBOG00000026541	TRMT13	96	51.907	Saimiri_boliviensis_boliviensis
ENSPNYG00000013690	trmt13	92	50.905	ENSSHAG00000005213	TRMT13	97	50.905	Sarcophilus_harrisii
ENSPNYG00000013690	trmt13	99	54.701	ENSSFOG00015017560	trmt13	98	55.128	Scleropages_formosus
ENSPNYG00000013690	trmt13	99	67.974	ENSSMAG00000014592	trmt13	96	67.974	Scophthalmus_maximus
ENSPNYG00000013690	trmt13	99	71.552	ENSSDUG00000015508	trmt13	97	71.064	Seriola_dumerili
ENSPNYG00000013690	trmt13	100	71.702	ENSSLDG00000019060	trmt13	97	71.702	Seriola_lalandi_dorsalis
ENSPNYG00000013690	trmt13	100	47.071	ENSSARG00000010344	TRMT13	99	47.071	Sorex_araneus
ENSPNYG00000013690	trmt13	98	50.000	ENSSPUG00000016339	TRMT13	99	50.000	Sphenodon_punctatus
ENSPNYG00000013690	trmt13	99	74.670	ENSSPAG00000011922	trmt13	99	74.130	Stegastes_partitus
ENSPNYG00000013690	trmt13	99	54.425	ENSSSCG00000006869	TRMT13	96	54.425	Sus_scrofa
ENSPNYG00000013690	trmt13	99	53.996	ENSTGUG00000005253	TRMT13	98	53.996	Taeniopygia_guttata
ENSPNYG00000013690	trmt13	98	65.577	ENSTRUG00000008400	trmt13	97	65.577	Takifugu_rubripes
ENSPNYG00000013690	trmt13	87	42.469	ENSTBEG00000008911	TRMT13	99	42.469	Tupaia_belangeri
ENSPNYG00000013690	trmt13	98	52.125	ENSUAMG00000017251	TRMT13	95	52.125	Ursus_americanus
ENSPNYG00000013690	trmt13	99	52.340	ENSUMAG00000007901	TRMT13	99	52.403	Ursus_maritimus
ENSPNYG00000013690	trmt13	76	75.000	ENSVPAG00000001034	TRMT13	80	75.000	Vicugna_pacos
ENSPNYG00000013690	trmt13	99	51.579	ENSVVUG00000021996	TRMT13	97	51.579	Vulpes_vulpes
ENSPNYG00000013690	trmt13	99	50.218	ENSXETG00000013204	trmt13	97	50.218	Xenopus_tropicalis
ENSPNYG00000013690	trmt13	99	64.770	ENSXMAG00000010765	trmt13	99	64.770	Xiphophorus_maculatus