EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Orthologs
Description
Ensembl ID
ENSPNYG00000013745 (Gene tree)
Gene ID
102202859
Gene Symbol
csde1
Alias
fa92c07|si:ch211-261n11.2|wu:fa92c07|wu:fa97c10|wu:fb53f07|wu:fb78d03
Full Name
cold shock domain containing E1
Gene Type
protein_coding
Species
Pundamilia_nyererei
Status
putative
Strand
Plus strand
Length
12074 bases
Position
chrJH419244.1:2973088-2985161
Accession
102202859
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSPNYP00000018296CSDPF00313.223.2e-8315
ENSPNYP00000018296CSDPF00313.223.2e-8325
ENSPNYP00000018296CSDPF00313.223.2e-8335
ENSPNYP00000018296CSDPF00313.223.2e-8345
ENSPNYP00000018296CSDPF00313.223.2e-8355
ENSPNYP00000018225CSDPF00313.227e-8315
ENSPNYP00000018225CSDPF00313.227e-8325
ENSPNYP00000018225CSDPF00313.227e-8335
ENSPNYP00000018225CSDPF00313.227e-8345
ENSPNYP00000018225CSDPF00313.227e-8355
ENSPNYP00000018244CSDPF00313.221.1e-8215
ENSPNYP00000018244CSDPF00313.221.1e-8225
ENSPNYP00000018244CSDPF00313.221.1e-8235
ENSPNYP00000018244CSDPF00313.221.1e-8245
ENSPNYP00000018244CSDPF00313.221.1e-8255
ENSPNYP00000018270CSDPF00313.226.3e-8215
ENSPNYP00000018270CSDPF00313.226.3e-8225
ENSPNYP00000018270CSDPF00313.226.3e-8235
ENSPNYP00000018270CSDPF00313.226.3e-8245
ENSPNYP00000018270CSDPF00313.226.3e-8255
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSPNYT00000018752-2310-ENSPNYP00000018296769 (aa)--
ENSPNYT00000018697-4188XM_005730793ENSPNYP00000018244855 (aa)XP_005730850-
ENSPNYT00000018679-4206XM_005730789ENSPNYP00000018225861 (aa)XP_005730846-
ENSPNYT00000018724-4074XM_005730790ENSPNYP00000018270827 (aa)XP_005730847-
Gene Model
Click here to download ENSPNYG00000013745's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSPNYG00000013745's network
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSPNYG00000013745csde110077.373ENSG00000009307CSDE110085.294Homo_sapiens
ENSPNYG00000013745csde110093.628ENSAPOG00000015538csde110093.628Acanthochromis_polyacanthus
ENSPNYG00000013745csde110076.593ENSAMEG00000017129CSDE19476.593Ailuropoda_melanoleuca
ENSPNYG00000013745csde19095.676ENSACIG00000015175csde110095.676Amphilophus_citrinellus
ENSPNYG00000013745csde110093.368ENSAOCG00000011510csde110093.368Amphiprion_ocellaris
ENSPNYG00000013745csde110093.498ENSAPEG00000007194csde110093.498Amphiprion_percula
ENSPNYG00000013745csde110092.718ENSATEG00000003864csde110092.718Anabas_testudineus
ENSPNYG00000013745csde110079.454ENSAPLG00000008797CSDE110079.064Anas_platyrhynchos
ENSPNYG00000013745csde110076.500ENSACAG00000003120CSDE110078.358Anolis_carolinensis
ENSPNYG00000013745csde19361.433ENSANAG00000028396-9362.500Aotus_nancymaae
ENSPNYG00000013745csde110077.243ENSANAG00000024665CSDE19974.911Aotus_nancymaae
ENSPNYG00000013745csde1100100.000ENSACLG00000013296csde1100100.000Astatotilapia_calliptera
ENSPNYG00000013745csde110085.084ENSAMXG00000007436csde110084.565Astyanax_mexicanus
ENSPNYG00000013745csde110077.113ENSBTAG00000000678CSDE110077.113Bos_taurus
ENSPNYG00000013745csde110077.243ENSCJAG00000012565CSDE19975.030Callithrix_jacchus
ENSPNYG00000013745csde19877.822ENSCAFG00000009618CSDE19477.822Canis_familiaris
ENSPNYG00000013745csde110077.633ENSCAFG00020000481CSDE110077.633Canis_lupus_dingo
ENSPNYG00000013745csde110077.113ENSCHIG00000017250CSDE110077.113Capra_hircus
ENSPNYG00000013745csde110077.373ENSTSYG00000003747CSDE110077.373Carlito_syrichta
ENSPNYG00000013745csde19476.687ENSCAPG00000015128CSDE110076.687Cavia_aperea
ENSPNYG00000013745csde110071.808ENSCPOG00000040388CSDE110072.693Cavia_porcellus
ENSPNYG00000013745csde110077.243ENSCCAG00000036794CSDE110076.244Cebus_capucinus
ENSPNYG00000013745csde19556.872ENSCCAG00000033677-9955.924Cebus_capucinus
ENSPNYG00000013745csde19754.130ENSCCAG00000030878-9154.889Cebus_capucinus
ENSPNYG00000013745csde110077.373ENSCATG00000036962CSDE19777.373Cercocebus_atys
ENSPNYG00000013745csde110077.503ENSCLAG00000006618CSDE110077.503Chinchilla_lanigera
ENSPNYG00000013745csde110074.375ENSCSAG00000001658CSDE19975.149Chlorocebus_sabaeus
ENSPNYG00000013745csde110082.524ENSCHOG00000000918CSDE18979.456Choloepus_hoffmanni
ENSPNYG00000013745csde110079.584ENSCPBG00000016547CSDE110079.194Chrysemys_picta_bellii
ENSPNYG00000013745csde19842.280ENSCING00000014465-9642.043Ciona_intestinalis
ENSPNYG00000013745csde19741.408ENSCSAVG00000008100-10041.038Ciona_savignyi
ENSPNYG00000013745csde19079.924ENSCANG00000031069-9479.259Colobus_angolensis_palliatus
ENSPNYG00000013745csde110077.373ENSCANG00000035096CSDE19777.373Colobus_angolensis_palliatus
ENSPNYG00000013745csde110076.723ENSCGRG00001016833-10076.723Cricetulus_griseus_chok1gshd
ENSPNYG00000013745csde110063.069ENSCGRG00001014011-10063.069Cricetulus_griseus_chok1gshd
ENSPNYG00000013745csde19673.111ENSCGRG00000002225-10073.111Cricetulus_griseus_crigri
ENSPNYG00000013745csde110073.913ENSCGRG00000005831-10073.913Cricetulus_griseus_crigri
ENSPNYG00000013745csde110091.157ENSCSEG00000002620csde110091.157Cynoglossus_semilaevis
ENSPNYG00000013745csde110091.678ENSCVAG00000001344csde110091.678Cyprinodon_variegatus
ENSPNYG00000013745csde110084.541ENSDARG00000074758csde110089.568Danio_rerio
ENSPNYG00000013745csde16250.951ENSDNOG00000034464-9964.762Dasypus_novemcinctus
ENSPNYG00000013745csde110077.792ENSDNOG00000010287-9377.792Dasypus_novemcinctus
ENSPNYG00000013745csde19976.119ENSDORG00000011609Csde110076.119Dipodomys_ordii
ENSPNYG00000013745csde19747.481FBgn0263352Unr8647.431Drosophila_melanogaster
ENSPNYG00000013745csde17953.465ENSETEG00000007109-9953.465Echinops_telfairi
ENSPNYG00000013745csde19068.671ENSETEG00000006280-9968.671Echinops_telfairi
ENSPNYG00000013745csde19960.156ENSETEG00000013678-9960.156Echinops_telfairi
ENSPNYG00000013745csde18881.148ENSETEG00000002491-8671.470Echinops_telfairi
ENSPNYG00000013745csde19953.202ENSEBUG00000008647csde19952.745Eptatretus_burgeri
ENSPNYG00000013745csde110077.763ENSEASG00005006284CSDE110076.741Equus_asinus_asinus
ENSPNYG00000013745csde110077.763ENSECAG00000020885CSDE110076.741Equus_caballus
ENSPNYG00000013745csde19381.562ENSEEUG00000006286CSDE16881.562Erinaceus_europaeus
ENSPNYG00000013745csde110085.885ENSELUG00000015507csde110084.864Esox_lucius
ENSPNYG00000013745csde110077.633ENSFCAG00000029266CSDE110077.633Felis_catus
ENSPNYG00000013745csde110075.875ENSFALG00000003407CSDE110077.861Ficedula_albicollis
ENSPNYG00000013745csde19975.970ENSFDAG00000007882CSDE110075.970Fukomys_damarensis
ENSPNYG00000013745csde110091.057ENSFHEG00000010799csde110091.022Fundulus_heteroclitus
ENSPNYG00000013745csde19985.369ENSGMOG00000012731csde110087.656Gadus_morhua
ENSPNYG00000013745csde19876.306ENSGALG00000002139CSDE19878.327Gallus_gallus
ENSPNYG00000013745csde19492.214ENSGAFG00000005241csde19592.214Gambusia_affinis
ENSPNYG00000013745csde19988.862ENSGACG00000004544csde110091.511Gasterosteus_aculeatus
ENSPNYG00000013745csde110079.454ENSGAGG00000017685CSDE110078.234Gopherus_agassizii
ENSPNYG00000013745csde110077.373ENSGGOG00000002164CSDE110077.373Gorilla_gorilla
ENSPNYG00000013745csde1100100.000ENSHBUG00000020315csde1100100.000Haplochromis_burtoni
ENSPNYG00000013745csde19967.463ENSHGLG00000008555-10067.463Heterocephalus_glaber_female
ENSPNYG00000013745csde19960.145ENSHGLG00000000650-9961.893Heterocephalus_glaber_female
ENSPNYG00000013745csde110063.476ENSHGLG00000019549-10064.339Heterocephalus_glaber_female
ENSPNYG00000013745csde110070.351ENSHGLG00000009620-10070.741Heterocephalus_glaber_female
ENSPNYG00000013745csde110069.571ENSHGLG00000003829-10069.571Heterocephalus_glaber_female
ENSPNYG00000013745csde19966.841ENSHGLG00000007471-9866.841Heterocephalus_glaber_female
ENSPNYG00000013745csde19666.000ENSHGLG00000010039-10066.000Heterocephalus_glaber_female
ENSPNYG00000013745csde19660.444ENSHGLG00100004833-10060.444Heterocephalus_glaber_male
ENSPNYG00000013745csde110063.636ENSHGLG00100001846-10063.377Heterocephalus_glaber_male
ENSPNYG00000013745csde110065.150ENSHGLG00100012072-10065.150Heterocephalus_glaber_male
ENSPNYG00000013745csde19965.531ENSHGLG00100007287-9865.531Heterocephalus_glaber_male
ENSPNYG00000013745csde19963.253ENSHGLG00100002245-9965.093Heterocephalus_glaber_male
ENSPNYG00000013745csde19365.229ENSHGLG00100004195-10064.951Heterocephalus_glaber_male
ENSPNYG00000013745csde110077.113ENSHGLG00100019438-10077.113Heterocephalus_glaber_male
ENSPNYG00000013745csde19665.778ENSHGLG00100006910-10065.778Heterocephalus_glaber_male
ENSPNYG00000013745csde110090.897ENSHCOG00000004158csde110090.897Hippocampus_comes
ENSPNYG00000013745csde110084.565ENSIPUG00000000355csde110083.917Ictalurus_punctatus
ENSPNYG00000013745csde19065.503ENSSTOG00000032722-9865.503Ictidomys_tridecemlineatus
ENSPNYG00000013745csde110063.520ENSSTOG00000030994-10063.393Ictidomys_tridecemlineatus
ENSPNYG00000013745csde19976.119ENSJJAG00000019571Csde110076.119Jaculus_jaculus
ENSPNYG00000013745csde110091.502ENSKMAG00000005685csde110091.811Kryptolebias_marmoratus
ENSPNYG00000013745csde110092.588ENSLBEG00000014770csde110092.588Labrus_bergylta
ENSPNYG00000013745csde110073.580ENSLACG00000018452CSDE19973.372Latimeria_chalumnae
ENSPNYG00000013745csde110082.456ENSLOCG00000010413csde110082.497Lepisosteus_oculatus
ENSPNYG00000013745csde110077.243ENSLAFG00000007150CSDE19677.243Loxodonta_africana
ENSPNYG00000013745csde110077.373ENSMFAG00000003674CSDE110077.373Macaca_fascicularis
ENSPNYG00000013745csde110077.373ENSMMUG00000001974CSDE110077.373Macaca_mulatta
ENSPNYG00000013745csde110077.373ENSMNEG00000045247CSDE19777.373Macaca_nemestrina
ENSPNYG00000013745csde110077.113ENSMLEG00000038673CSDE19974.911Mandrillus_leucophaeus
ENSPNYG00000013745csde110093.628ENSMAMG00000008821csde110093.628Mastacembelus_armatus
ENSPNYG00000013745csde1100100.000ENSMZEG00005021675csde1100100.000Maylandia_zebra
ENSPNYG00000013745csde110079.351ENSMGAG00000016381CSDE110078.961Meleagris_gallopavo
ENSPNYG00000013745csde19975.821ENSMAUG00000014031Csde110075.821Mesocricetus_auratus
ENSPNYG00000013745csde110077.503ENSMICG00000002050CSDE19677.445Microcebus_murinus
ENSPNYG00000013745csde110076.723ENSMOCG00000018960Csde110076.723Microtus_ochrogaster
ENSPNYG00000013745csde110093.238ENSMMOG00000015075csde110093.238Mola_mola
ENSPNYG00000013745csde110077.821ENSMODG00000004685CSDE110077.488Monodelphis_domestica
ENSPNYG00000013745csde110093.238ENSMALG00000007132csde110093.238Monopterus_albus
ENSPNYG00000013745csde110076.853MGP_CAROLIEiJ_G0025444Csde110084.106Mus_caroli
ENSPNYG00000013745csde110076.853ENSMUSG00000068823Csde110084.106Mus_musculus
ENSPNYG00000013745csde110076.853MGP_PahariEiJ_G0026888Csde110084.106Mus_pahari
ENSPNYG00000013745csde110076.853MGP_SPRETEiJ_G0026394Csde110084.106Mus_spretus
ENSPNYG00000013745csde19874.745ENSMPUG00000005753CSDE19976.777Mustela_putorius_furo
ENSPNYG00000013745csde110077.113ENSMLUG00000005681CSDE19477.113Myotis_lucifugus
ENSPNYG00000013745csde19652.000ENSNGAG00000012599-10052.000Nannospalax_galili
ENSPNYG00000013745csde19975.672ENSNGAG00000021929Csde110075.672Nannospalax_galili
ENSPNYG00000013745csde1100100.000ENSNBRG00000020808csde1100100.000Neolamprologus_brichardi
ENSPNYG00000013745csde110077.373ENSNLEG00000004842CSDE19777.373Nomascus_leucogenys
ENSPNYG00000013745csde19884.466ENSMEUG00000002677CSDE19584.466Notamacropus_eugenii
ENSPNYG00000013745csde19882.524ENSOPRG00000005002CSDE17682.524Ochotona_princeps
ENSPNYG00000013745csde19975.970ENSODEG00000007383-10075.970Octodon_degus
ENSPNYG00000013745csde19652.097ENSODEG00000005979-9852.097Octodon_degus
ENSPNYG00000013745csde110098.549ENSONIG00000009309csde110098.549Oreochromis_niloticus
ENSPNYG00000013745csde110081.356ENSOANG00000003346-8281.356Ornithorhynchus_anatinus
ENSPNYG00000013745csde110076.983ENSOCUG00000016438CSDE19974.528Oryctolagus_cuniculus
ENSPNYG00000013745csde110091.678ENSORLG00000000707csde110091.678Oryzias_latipes
ENSPNYG00000013745csde110090.994ENSORLG00020005148csde110090.810Oryzias_latipes_hni
ENSPNYG00000013745csde110091.547ENSORLG00015019415csde110091.547Oryzias_latipes_hsok
ENSPNYG00000013745csde110090.897ENSOMEG00000015656csde110091.678Oryzias_melastigma
ENSPNYG00000013745csde110077.503ENSOGAG00000012127CSDE19477.503Otolemur_garnettii
ENSPNYG00000013745csde110077.113ENSOARG00000020034CSDE19477.113Ovis_aries
ENSPNYG00000013745csde110077.373ENSPPAG00000025861CSDE110077.373Pan_paniscus
ENSPNYG00000013745csde110077.633ENSPPRG00000006747CSDE19875.357Panthera_pardus
ENSPNYG00000013745csde110077.633ENSPTIG00000015468CSDE110076.617Panthera_tigris_altaica
ENSPNYG00000013745csde110077.373ENSPTRG00000033721CSDE110076.368Pan_troglodytes
ENSPNYG00000013745csde110077.373ENSPANG00000018873CSDE110077.373Papio_anubis
ENSPNYG00000013745csde110084.785ENSPKIG00000009459csde110084.785Paramormyrops_kingsleyae
ENSPNYG00000013745csde19677.042ENSPSIG00000003823CSDE19483.217Pelodiscus_sinensis
ENSPNYG00000013745csde110090.260ENSPMGG00000000772csde110089.610Periophthalmus_magnuspinnatus
ENSPNYG00000013745csde19976.119ENSPEMG00000020357-10076.119Peromyscus_maniculatus_bairdii
ENSPNYG00000013745csde110075.625ENSPCIG00000022587CSDE110077.612Phascolarctos_cinereus
ENSPNYG00000013745csde19790.447ENSPFOG00000012664csde110090.824Poecilia_formosa
ENSPNYG00000013745csde19584.946ENSPLAG00000017680csde19384.946Poecilia_latipinna
ENSPNYG00000013745csde19585.253ENSPMEG00000005094csde19585.253Poecilia_mexicana
ENSPNYG00000013745csde110091.579ENSPREG00000011631csde110091.456Poecilia_reticulata
ENSPNYG00000013745csde110074.250ENSPPYG00000000996CSDE110076.244Pongo_abelii
ENSPNYG00000013745csde110083.495ENSPCAG00000014368CSDE19083.495Procavia_capensis
ENSPNYG00000013745csde19170.301ENSPCOG00000008223-9270.301Propithecus_coquereli
ENSPNYG00000013745csde110077.633ENSPCOG00000017893CSDE110077.633Propithecus_coquereli
ENSPNYG00000013745csde110072.172ENSPVAG00000008225CSDE19572.172Pteropus_vampyrus
ENSPNYG00000013745csde110086.252ENSPNAG00000001958csde110085.603Pygocentrus_nattereri
ENSPNYG00000013745csde110073.750ENSRNOG00000061058Csde110075.746Rattus_norvegicus
ENSPNYG00000013745csde110072.987ENSRBIG00000038966-9970.379Rhinopithecus_bieti
ENSPNYG00000013745csde110074.416ENSRBIG00000038088-10074.416Rhinopithecus_bieti
ENSPNYG00000013745csde110077.373ENSRROG00000043101CSDE19777.373Rhinopithecus_roxellana
ENSPNYG00000013745csde110077.243ENSSBOG00000035592CSDE19975.030Saimiri_boliviensis_boliviensis
ENSPNYG00000013745csde110078.674ENSSHAG00000009831CSDE110078.674Sarcophilus_harrisii
ENSPNYG00000013745csde110084.805ENSSFOG00015007498csde110084.807Scleropages_formosus
ENSPNYG00000013745csde110093.117ENSSMAG00000007203csde110092.848Scophthalmus_maximus
ENSPNYG00000013745csde110094.408ENSSDUG00000015380csde110094.408Seriola_dumerili
ENSPNYG00000013745csde110094.408ENSSLDG00000008819csde110094.408Seriola_lalandi_dorsalis
ENSPNYG00000013745csde110076.983ENSSARG00000000738CSDE19972.057Sorex_araneus
ENSPNYG00000013745csde110079.714ENSSPUG00000008714CSDE110079.324Sphenodon_punctatus
ENSPNYG00000013745csde110093.368ENSSPAG00000000716csde110093.368Stegastes_partitus
ENSPNYG00000013745csde110077.763ENSSSCG00000006752CSDE110077.763Sus_scrofa
ENSPNYG00000013745csde110075.187ENSTGUG00000000972CSDE110077.171Taeniopygia_guttata
ENSPNYG00000013745csde110086.216ENSTRUG00000007996csde110086.216Takifugu_rubripes
ENSPNYG00000013745csde18795.019ENSTNIG00000010878csde110095.019Tetraodon_nigroviridis
ENSPNYG00000013745csde19375.949ENSTBEG00000011880-6080.368Tupaia_belangeri
ENSPNYG00000013745csde110076.853ENSTTRG00000015583CSDE19476.853Tursiops_truncatus
ENSPNYG00000013745csde18973.034ENSUAMG00000024289-9973.034Ursus_americanus
ENSPNYG00000013745csde19282.353ENSUAMG00000021779-9882.609Ursus_americanus
ENSPNYG00000013745csde19771.065ENSUMAG00000011714-9972.749Ursus_maritimus
ENSPNYG00000013745csde110071.001ENSUMAG00000009720-9771.001Ursus_maritimus
ENSPNYG00000013745csde110080.420ENSVPAG00000000749CSDE17980.420Vicugna_pacos
ENSPNYG00000013745csde19372.886ENSVVUG00000009890CSDE19475.217Vulpes_vulpes
ENSPNYG00000013745csde110075.218ENSXETG00000021448csde110076.952Xenopus_tropicalis
ENSPNYG00000013745csde19494.553ENSXCOG00000000035csde18994.553Xiphophorus_couchianus
ENSPNYG00000013745csde110091.462ENSXMAG00000009080csde110091.462Xiphophorus_maculatus

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