EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPNYG00000013988 (Gene tree)
Gene ID: -
Gene Symbol: tomm20a
Alias: arid4b|ch1073-321c8.1|wu:fk47b11
Full Name: AT-rich interaction domain 4B
Gene Type: protein_coding
Species: Pundamilia_nyererei
Status: putative
Strand: Plus strand
Length: 21975 bases
Position: chrJH419325.1:1706689-1728663
Accession: 102195336
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPNYP00000018544	Tudor-knot	PF11717.8	1.3e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPNYT00000019007	-	3627	XM_005742443	ENSPNYP00000018544	1208 (aa)	XP_005742500	-

Gene Model

Click here to download ENSPNYG00000013988's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPNYG00000013988's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPNYG00000013988	tomm20a	92	69.756	ENSG00000054267	ARID4B	85	69.324	Homo_sapiens
ENSPNYG00000013988	tomm20a	100	82.632	ENSAPOG00000010823	tomm20a	99	82.862	Acanthochromis_polyacanthus
ENSPNYG00000013988	tomm20a	94	90.331	ENSACIG00000006313	tomm20a	100	90.728	Amphilophus_citrinellus
ENSPNYG00000013988	tomm20a	100	82.479	ENSAOCG00000003330	tomm20a	99	82.708	Amphiprion_ocellaris
ENSPNYG00000013988	tomm20a	100	82.402	ENSAPEG00000024018	tomm20a	99	82.632	Amphiprion_percula
ENSPNYG00000013988	tomm20a	100	79.112	ENSATEG00000014930	tomm20a	99	79.878	Anabas_testudineus
ENSPNYG00000013988	tomm20a	51	57.571	ENSACAG00000001289	ARID4B	99	50.038	Anolis_carolinensis
ENSPNYG00000013988	tomm20a	94	99.597	ENSACLG00000023521	tomm20a	100	99.597	Astatotilapia_calliptera
ENSPNYG00000013988	tomm20a	95	59.983	ENSAMXG00000003657	tomm20a	96	64.482	Astyanax_mexicanus
ENSPNYG00000013988	tomm20a	92	69.756	ENSCATG00000042166	ARID4B	99	50.635	Cercocebus_atys
ENSPNYG00000013988	tomm20a	92	69.756	ENSCSAG00000010069	ARID4B	99	50.524	Chlorocebus_sabaeus
ENSPNYG00000013988	tomm20a	92	65.037	ENSCANG00000027498	ARID4B	99	48.839	Colobus_angolensis_palliatus
ENSPNYG00000013988	tomm20a	99	75.699	ENSCSEG00000012928	tomm20a	98	75.155	Cynoglossus_semilaevis
ENSPNYG00000013988	tomm20a	100	75.597	ENSCVAG00000003244	tomm20a	99	75.212	Cyprinodon_variegatus
ENSPNYG00000013988	tomm20a	100	62.605	ENSDARG00000090656	tomm20a	99	62.908	Danio_rerio
ENSPNYG00000013988	tomm20a	99	50.444	ENSDORG00000006422	Arid4b	99	50.486	Dipodomys_ordii
ENSPNYG00000013988	tomm20a	89	60.340	ENSETEG00000005596	ARID4B	87	60.340	Echinops_telfairi
ENSPNYG00000013988	tomm20a	71	50.111	ENSELUG00000018441	tomm20a	94	54.485	Esox_lucius
ENSPNYG00000013988	tomm20a	100	76.988	ENSFHEG00000003798	tomm20a	99	75.229	Fundulus_heteroclitus
ENSPNYG00000013988	tomm20a	91	73.123	ENSGMOG00000018747	tomm20a	91	69.170	Gadus_morhua
ENSPNYG00000013988	tomm20a	100	73.349	ENSGACG00000004298	tomm20a	99	73.963	Gasterosteus_aculeatus
ENSPNYG00000013988	tomm20a	99	49.888	ENSGAGG00000020544	ARID4B	97	51.195	Gopherus_agassizii
ENSPNYG00000013988	tomm20a	100	92.736	ENSHBUG00000020369	tomm20a	99	92.736	Haplochromis_burtoni
ENSPNYG00000013988	tomm20a	100	73.194	ENSHCOG00000010376	tomm20a	100	72.917	Hippocampus_comes
ENSPNYG00000013988	tomm20a	100	61.158	ENSIPUG00000014234	arid4b	99	61.364	Ictalurus_punctatus
ENSPNYG00000013988	tomm20a	90	90.000	ENSKMAG00000010987	tomm20a	98	75.871	Kryptolebias_marmoratus
ENSPNYG00000013988	tomm20a	100	56.508	ENSLOCG00000015899	tomm20a	99	58.054	Lepisosteus_oculatus
ENSPNYG00000013988	tomm20a	52	56.344	ENSLAFG00000014295	ARID4B	99	50.261	Loxodonta_africana
ENSPNYG00000013988	tomm20a	92	69.756	ENSMFAG00000044016	ARID4B	99	50.635	Macaca_fascicularis
ENSPNYG00000013988	tomm20a	92	69.756	ENSMMUG00000007141	ARID4B	99	50.635	Macaca_mulatta
ENSPNYG00000013988	tomm20a	92	69.756	ENSMNEG00000014840	ARID4B	99	50.374	Macaca_nemestrina
ENSPNYG00000013988	tomm20a	92	69.704	ENSMLEG00000033583	ARID4B	99	50.562	Mandrillus_leucophaeus
ENSPNYG00000013988	tomm20a	92	79.101	ENSMAMG00000017134	tomm20a	99	80.433	Mastacembelus_armatus
ENSPNYG00000013988	tomm20a	100	92.736	ENSMZEG00005009879	tomm20a	99	92.736	Maylandia_zebra
ENSPNYG00000013988	tomm20a	99	76.892	ENSMMOG00000000561	tomm20a	98	77.624	Mola_mola
ENSPNYG00000013988	tomm20a	61	45.409	ENSMODG00000008417	ARID4B	99	49.926	Monodelphis_domestica
ENSPNYG00000013988	tomm20a	100	79.568	ENSMALG00000005205	tomm20a	99	81.033	Monopterus_albus
ENSPNYG00000013988	tomm20a	94	99.060	ENSNBRG00000019684	tomm20a	100	99.060	Neolamprologus_brichardi
ENSPNYG00000013988	tomm20a	100	72.720	ENSORLG00000012510	tomm20a	99	71.571	Oryzias_latipes
ENSPNYG00000013988	tomm20a	94	83.855	ENSORLG00020013988	tomm20a	100	81.713	Oryzias_latipes_hni
ENSPNYG00000013988	tomm20a	94	84.223	ENSORLG00015022835	tomm20a	100	84.223	Oryzias_latipes_hsok
ENSPNYG00000013988	tomm20a	100	73.021	ENSOMEG00000000521	tomm20a	99	72.713	Oryzias_melastigma
ENSPNYG00000013988	tomm20a	92	69.363	ENSPANG00000013611	ARID4B	99	50.486	Papio_anubis
ENSPNYG00000013988	tomm20a	87	70.462	ENSPSIG00000011632	ARID4B	99	48.967	Pelodiscus_sinensis
ENSPNYG00000013988	tomm20a	53	72.932	ENSPMGG00000001596	tomm20a	89	73.684	Periophthalmus_magnuspinnatus
ENSPNYG00000013988	tomm20a	99	52.374	ENSPCIG00000029756	ARID4B	99	52.918	Phascolarctos_cinereus
ENSPNYG00000013988	tomm20a	100	76.394	ENSPFOG00000019430	tomm20a	99	76.547	Poecilia_formosa
ENSPNYG00000013988	tomm20a	100	76.165	ENSPLAG00000010554	tomm20a	99	76.318	Poecilia_latipinna
ENSPNYG00000013988	tomm20a	100	75.131	ENSPMEG00000003093	tomm20a	99	74.682	Poecilia_mexicana
ENSPNYG00000013988	tomm20a	100	75.383	ENSPREG00000007996	tomm20a	99	76.935	Poecilia_reticulata
ENSPNYG00000013988	tomm20a	55	70.976	ENSPVAG00000015159	ARID4B	99	48.936	Pteropus_vampyrus
ENSPNYG00000013988	tomm20a	100	64.286	ENSPNAG00000000523	tomm20a	92	64.148	Pygocentrus_nattereri
ENSPNYG00000013988	tomm20a	92	67.568	ENSRBIG00000042029	ARID4B	96	47.200	Rhinopithecus_bieti
ENSPNYG00000013988	tomm20a	75	49.906	ENSSHAG00000015214	ARID4B	99	49.890	Sarcophilus_harrisii
ENSPNYG00000013988	tomm20a	76	51.382	ENSSFOG00015008923	tomm20a	98	51.917	Scleropages_formosus
ENSPNYG00000013988	tomm20a	100	58.976	ENSSFOG00015000132	arid4b	99	58.456	Scleropages_formosus
ENSPNYG00000013988	tomm20a	100	77.461	ENSSMAG00000010430	tomm20a	99	78.437	Scophthalmus_maximus
ENSPNYG00000013988	tomm20a	100	81.595	ENSSDUG00000003019	tomm20a	99	82.055	Seriola_dumerili
ENSPNYG00000013988	tomm20a	99	50.112	ENSSPUG00000015466	ARID4B	97	50.228	Sphenodon_punctatus
ENSPNYG00000013988	tomm20a	100	82.669	ENSSPAG00000007358	tomm20a	99	82.745	Stegastes_partitus
ENSPNYG00000013988	tomm20a	69	68.771	ENSTRUG00000002893	tomm20a	100	68.137	Takifugu_rubripes
ENSPNYG00000013988	tomm20a	70	62.470	ENSTBEG00000003961	ARID4B	67	61.259	Tupaia_belangeri
ENSPNYG00000013988	tomm20a	100	48.438	ENSXETG00000024651	arid4b	88	53.607	Xenopus_tropicalis
ENSPNYG00000013988	tomm20a	100	75.828	ENSXMAG00000006538	tomm20a	99	77.231	Xiphophorus_maculatus