EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPNYG00000014139 (Gene tree)
Gene ID: 102196596
Gene Symbol: setd1a
Alias: -
Full Name: SET domain containing 1A
Gene Type: protein_coding
Species: Pundamilia_nyererei
Status: putative
Strand: Plus strand
Length: 21646 bases
Position: chrJH419223.1:4510414-4532059
Accession: 102196596
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPNYP00000018717	RRM_1	PF00076.22	8.6e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPNYT00000019180	-	9740	XM_005726228	ENSPNYP00000018717	2194 (aa)	XP_005726285	UPI0003AF983B

Gene Model

Click here to download ENSPNYG00000014139's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPNYG00000014139's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPNYG00000014139	setd1a	59	65.605	ENSPNYG00000009484	setd1ba	54	66.557

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPNYG00000014139	setd1a	82	97.512	ENSAPOG00000018002	setd1a	78	97.512	Acanthochromis_polyacanthus
ENSPNYG00000014139	setd1a	51	76.603	ENSAMEG00000007540	-	57	76.603	Ailuropoda_melanoleuca
ENSPNYG00000014139	setd1a	77	91.265	ENSACIG00000007144	setd1a	99	93.730	Amphilophus_citrinellus
ENSPNYG00000014139	setd1a	100	87.809	ENSAOCG00000003663	setd1a	100	87.989	Amphiprion_ocellaris
ENSPNYG00000014139	setd1a	100	85.682	ENSATEG00000022798	setd1a	100	85.104	Anabas_testudineus
ENSPNYG00000014139	setd1a	52	78.641	ENSANAG00000021698	-	61	80.068	Aotus_nancymaae
ENSPNYG00000014139	setd1a	100	99.045	ENSACLG00000024747	setd1a	100	99.045	Astatotilapia_calliptera
ENSPNYG00000014139	setd1a	51	79.791	ENSTSYG00000014425	-	58	80.069	Carlito_syrichta
ENSPNYG00000014139	setd1a	52	80.808	ENSCAPG00000006491	-	70	80.808	Cavia_aperea
ENSPNYG00000014139	setd1a	60	66.319	ENSCPBG00000010830	-	66	80.743	Chrysemys_picta_bellii
ENSPNYG00000014139	setd1a	100	81.154	ENSCSEG00000021605	setd1a	100	80.162	Cynoglossus_semilaevis
ENSPNYG00000014139	setd1a	100	81.258	ENSCVAG00000011672	setd1a	100	80.942	Cyprinodon_variegatus
ENSPNYG00000014139	setd1a	51	78.378	ENSEASG00005011195	-	61	78.378	Equus_asinus_asinus
ENSPNYG00000014139	setd1a	53	82.069	ENSECAG00000015162	SETD1A	62	82.192	Equus_caballus
ENSPNYG00000014139	setd1a	100	60.664	ENSELUG00000020261	setd1a	76	74.487	Esox_lucius
ENSPNYG00000014139	setd1a	100	72.393	ENSFHEG00000023258	setd1a	97	80.952	Fundulus_heteroclitus
ENSPNYG00000014139	setd1a	57	91.562	ENSGAFG00000011698	setd1a	80	91.562	Gambusia_affinis
ENSPNYG00000014139	setd1a	66	86.913	ENSGACG00000013688	setd1a	83	84.921	Gasterosteus_aculeatus
ENSPNYG00000014139	setd1a	55	81.667	ENSGAGG00000010781	-	71	82.432	Gopherus_agassizii
ENSPNYG00000014139	setd1a	100	99.136	ENSHBUG00000008893	setd1a	100	99.136	Haplochromis_burtoni
ENSPNYG00000014139	setd1a	54	78.594	ENSHGLG00000014238	-	78	81.081	Heterocephalus_glaber_female
ENSPNYG00000014139	setd1a	77	85.795	ENSHCOG00000003119	setd1a	100	85.511	Hippocampus_comes
ENSPNYG00000014139	setd1a	100	83.371	ENSKMAG00000009484	setd1a	100	83.567	Kryptolebias_marmoratus
ENSPNYG00000014139	setd1a	69	80.626	ENSLBEG00000004399	setd1a	100	82.848	Labrus_bergylta
ENSPNYG00000014139	setd1a	51	79.730	ENSMNEG00000032572	-	61	79.730	Macaca_nemestrina
ENSPNYG00000014139	setd1a	71	88.825	ENSMAMG00000021851	setd1a	98	88.825	Mastacembelus_armatus
ENSPNYG00000014139	setd1a	100	98.954	ENSMZEG00005023141	setd1a	100	98.954	Maylandia_zebra
ENSPNYG00000014139	setd1a	52	82.095	ENSMAUG00000008959	-	60	82.095	Mesocricetus_auratus
ENSPNYG00000014139	setd1a	74	87.960	ENSMMOG00000016992	setd1a	99	93.123	Mola_mola
ENSPNYG00000014139	setd1a	99	77.567	ENSMALG00000007401	setd1a	98	77.166	Monopterus_albus
ENSPNYG00000014139	setd1a	52	81.757	MGP_CAROLIEiJ_G0030519	-	100	72.589	Mus_caroli
ENSPNYG00000014139	setd1a	52	81.757	ENSMUSG00000042308	Setd1a	100	72.589	Mus_musculus
ENSPNYG00000014139	setd1a	51	81.757	MGP_PahariEiJ_G0013726	-	100	72.589	Mus_pahari
ENSPNYG00000014139	setd1a	52	81.757	MGP_SPRETEiJ_G0031633	Setd1a	100	72.081	Mus_spretus
ENSPNYG00000014139	setd1a	50	78.618	ENSMLUG00000027303	-	57	78.618	Myotis_lucifugus
ENSPNYG00000014139	setd1a	100	93.146	ENSNBRG00000004760	setd1a	100	93.146	Neolamprologus_brichardi
ENSPNYG00000014139	setd1a	51	81.849	ENSMEUG00000003396	-	57	81.081	Notamacropus_eugenii
ENSPNYG00000014139	setd1a	86	89.333	ENSONIG00000009854	setd1a	91	89.333	Oreochromis_niloticus
ENSPNYG00000014139	setd1a	100	79.593	ENSORLG00000002213	setd1a	100	80.552	Oryzias_latipes
ENSPNYG00000014139	setd1a	100	79.512	ENSORLG00020011897	setd1a	100	79.882	Oryzias_latipes_hni
ENSPNYG00000014139	setd1a	100	77.974	ENSORLG00015004826	setd1a	100	79.928	Oryzias_latipes_hsok
ENSPNYG00000014139	setd1a	100	79.438	ENSOMEG00000019732	setd1a	100	79.557	Oryzias_melastigma
ENSPNYG00000014139	setd1a	52	67.905	ENSOGAG00000028006	-	54	67.905	Otolemur_garnettii
ENSPNYG00000014139	setd1a	50	80.755	ENSPTIG00000010871	-	63	80.224	Panthera_tigris_altaica
ENSPNYG00000014139	setd1a	100	78.281	ENSPFOG00000013669	setd1a	100	78.125	Poecilia_formosa
ENSPNYG00000014139	setd1a	100	80.072	ENSPLAG00000009294	setd1a	100	79.284	Poecilia_latipinna
ENSPNYG00000014139	setd1a	100	80.145	ENSPMEG00000005864	setd1a	100	79.357	Poecilia_mexicana
ENSPNYG00000014139	setd1a	100	79.485	ENSPREG00000010201	setd1a	100	79.150	Poecilia_reticulata
ENSPNYG00000014139	setd1a	59	81.757	ENSPVAG00000011049	-	61	71.220	Pteropus_vampyrus
ENSPNYG00000014139	setd1a	55	80.546	ENSRBIG00000033047	-	64	79.730	Rhinopithecus_bieti
ENSPNYG00000014139	setd1a	53	80.546	ENSRROG00000040062	-	70	80.546	Rhinopithecus_roxellana
ENSPNYG00000014139	setd1a	51	80.743	ENSSHAG00000010784	-	58	80.743	Sarcophilus_harrisii
ENSPNYG00000014139	setd1a	100	84.101	ENSSMAG00000008846	setd1a	100	85.192	Scophthalmus_maximus
ENSPNYG00000014139	setd1a	100	88.553	ENSSDUG00000022142	setd1a	100	87.877	Seriola_dumerili
ENSPNYG00000014139	setd1a	100	88.418	ENSSLDG00000018250	setd1a	100	87.742	Seriola_lalandi_dorsalis
ENSPNYG00000014139	setd1a	100	89.129	ENSSPAG00000007822	setd1a	100	88.633	Stegastes_partitus
ENSPNYG00000014139	setd1a	78	86.596	ENSTRUG00000008953	setd1a	99	80.741	Takifugu_rubripes
ENSPNYG00000014139	setd1a	50	89.362	ENSTNIG00000014930	setd1a	90	83.077	Tetraodon_nigroviridis
ENSPNYG00000014139	setd1a	95	79.969	ENSXCOG00000017585	setd1a	100	74.435	Xiphophorus_couchianus
ENSPNYG00000014139	setd1a	100	80.371	ENSXMAG00000008021	setd1a	100	79.548	Xiphophorus_maculatus