EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPNYG00000014460 (Gene tree)
Gene ID: 102193541
Gene Symbol: rbm42
Alias: mgc10433l|zgc:109907
Full Name: RNA binding motif protein 42
Gene Type: protein_coding
Species: Pundamilia_nyererei
Status: putative
Strand: Minus strand
Length: 9333 bases
Position: chrJH419592.1:156434-165766
Accession: 102193541
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPNYP00000019132	RRM_1	PF00076.22	5.7e-18	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPNYT00000019613	-	3964	XM_005752874	ENSPNYP00000019132	402 (aa)	XP_005752931	UPI0003AFB0CB

Gene Model

Click here to download ENSPNYG00000014460's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPNYG00000014460's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPNYG00000014460	rbm42	100	86.978	ENSAPOG00000015109	rbm42	100	86.700	Acanthochromis_polyacanthus
ENSPNYG00000014460	rbm42	100	87.160	ENSACIG00000010771	rbm42	100	87.160	Amphilophus_citrinellus
ENSPNYG00000014460	rbm42	100	86.978	ENSAOCG00000008873	rbm42	100	86.700	Amphiprion_ocellaris
ENSPNYG00000014460	rbm42	100	86.978	ENSAPEG00000012051	rbm42	99	86.700	Amphiprion_percula
ENSPNYG00000014460	rbm42	100	86.453	ENSATEG00000000536	rbm42	100	86.453	Anabas_testudineus
ENSPNYG00000014460	rbm42	100	99.751	ENSACLG00000004988	rbm42	100	99.751	Astatotilapia_calliptera
ENSPNYG00000014460	rbm42	100	74.217	ENSAMXG00000016545	rbm42	100	74.699	Astyanax_mexicanus
ENSPNYG00000014460	rbm42	97	80.905	ENSCSEG00000010248	rbm42	100	81.156	Cynoglossus_semilaevis
ENSPNYG00000014460	rbm42	100	80.732	ENSCVAG00000015589	rbm42	100	81.707	Cyprinodon_variegatus
ENSPNYG00000014460	rbm42	100	71.046	ENSDARG00000039910	rbm42	100	72.573	Danio_rerio
ENSPNYG00000014460	rbm42	100	72.235	ENSELUG00000022403	rbm42	100	72.275	Esox_lucius
ENSPNYG00000014460	rbm42	65	78.388	ENSFHEG00000006764	rbm42	91	79.853	Fundulus_heteroclitus
ENSPNYG00000014460	rbm42	100	72.263	ENSGMOG00000012660	rbm42	100	71.776	Gadus_morhua
ENSPNYG00000014460	rbm42	76	80.906	ENSGAFG00000009059	rbm42	99	80.519	Gambusia_affinis
ENSPNYG00000014460	rbm42	100	82.963	ENSGACG00000004170	rbm42	100	82.469	Gasterosteus_aculeatus
ENSPNYG00000014460	rbm42	100	99.502	ENSHBUG00000011141	rbm42	100	99.502	Haplochromis_burtoni
ENSPNYG00000014460	rbm42	100	81.527	ENSHCOG00000021214	rbm42	100	80.147	Hippocampus_comes
ENSPNYG00000014460	rbm42	100	72.727	ENSIPUG00000022365	rbm42	99	73.317	Ictalurus_punctatus
ENSPNYG00000014460	rbm42	91	79.515	ENSKMAG00000015287	rbm42	99	79.515	Kryptolebias_marmoratus
ENSPNYG00000014460	rbm42	84	80.870	ENSLBEG00000004578	-	96	82.184	Labrus_bergylta
ENSPNYG00000014460	rbm42	100	81.127	ENSLBEG00000017547	rbm42	100	82.843	Labrus_bergylta
ENSPNYG00000014460	rbm42	100	67.536	ENSLOCG00000003368	rbm42	100	67.773	Lepisosteus_oculatus
ENSPNYG00000014460	rbm42	100	86.207	ENSMAMG00000006708	rbm42	100	86.207	Mastacembelus_armatus
ENSPNYG00000014460	rbm42	100	99.751	ENSMZEG00005025234	rbm42	100	99.751	Maylandia_zebra
ENSPNYG00000014460	rbm42	91	86.721	ENSMALG00000015720	rbm42	100	86.721	Monopterus_albus
ENSPNYG00000014460	rbm42	100	96.324	ENSONIG00000008029	rbm42	100	96.324	Oreochromis_niloticus
ENSPNYG00000014460	rbm42	100	63.942	ENSORLG00020022507	rbm42	100	63.702	Oryzias_latipes_hni
ENSPNYG00000014460	rbm42	100	82.716	ENSORLG00015000659	rbm42	100	82.716	Oryzias_latipes_hsok
ENSPNYG00000014460	rbm42	60	84.647	ENSOMEG00000014332	rbm42	99	80.228	Oryzias_melastigma
ENSPNYG00000014460	rbm42	100	73.621	ENSPKIG00000015165	rbm42	100	72.705	Paramormyrops_kingsleyae
ENSPNYG00000014460	rbm42	93	66.544	ENSPMGG00000003569	rbm42	100	97.143	Periophthalmus_magnuspinnatus
ENSPNYG00000014460	rbm42	54	55.605	ENSPMAG00000008633	rbm42	100	49.593	Petromyzon_marinus
ENSPNYG00000014460	rbm42	100	80.590	ENSPFOG00000007701	rbm42	100	80.440	Poecilia_formosa
ENSPNYG00000014460	rbm42	100	80.344	ENSPLAG00000009405	rbm42	100	80.196	Poecilia_latipinna
ENSPNYG00000014460	rbm42	100	80.344	ENSPMEG00000010375	rbm42	100	80.196	Poecilia_mexicana
ENSPNYG00000014460	rbm42	100	80.835	ENSPREG00000018102	rbm42	100	80.685	Poecilia_reticulata
ENSPNYG00000014460	rbm42	100	72.381	ENSPNAG00000009961	rbm42	100	73.206	Pygocentrus_nattereri
ENSPNYG00000014460	rbm42	100	70.188	ENSSFOG00015019227	rbm42	100	71.021	Scleropages_formosus
ENSPNYG00000014460	rbm42	100	84.275	ENSSMAG00000011935	rbm42	100	84.521	Scophthalmus_maximus
ENSPNYG00000014460	rbm42	100	88.670	ENSSDUG00000004033	rbm42	100	88.670	Seriola_dumerili
ENSPNYG00000014460	rbm42	100	79.104	ENSSLDG00000009918	rbm42	100	96.471	Seriola_lalandi_dorsalis
ENSPNYG00000014460	rbm42	100	87.715	ENSSPAG00000019871	rbm42	100	87.438	Stegastes_partitus
ENSPNYG00000014460	rbm42	100	78.818	ENSTRUG00000024586	-	76	77.531	Takifugu_rubripes
ENSPNYG00000014460	rbm42	99	65.986	ENSTNIG00000011669	rbm42	100	68.481	Tetraodon_nigroviridis
ENSPNYG00000014460	rbm42	100	55.405	ENSXETG00000017599	rbm42	100	58.879	Xenopus_tropicalis
ENSPNYG00000014460	rbm42	100	80.835	ENSXMAG00000012827	rbm42	100	80.685	Xiphophorus_maculatus