EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPNYG00000014477 (Gene tree)
Gene ID: 102211400
Gene Symbol: tnrc6c1
Alias: fj17e06|si:dkey-54k13.1|unm_sa1472|wu:fj17e06
Full Name: trinucleotide repeat-containing gene 6C protein-like
Gene Type: protein_coding
Species: Pundamilia_nyererei
Status: putative
Strand: Minus strand
Length: 22419 bases
Position: chrJH419264.1:1323469-1345887
Accession: 102211400
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPNYP00000019192	Ago_hook	PF10427.9	1.1e-05	1	1
ENSPNYP00000019192	RRM_1	PF00076.22	9e-05	1	1
ENSPNYP00000019246	RRM_1	PF00076.22	9.5e-05	1	1
ENSPNYP00000019213	RRM_1	PF00076.22	0.0001	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPNYT00000019694	-	6108	XM_005734566	ENSPNYP00000019213	1704 (aa)	XP_005734623	-
ENSPNYT00000019727	-	4911	-	ENSPNYP00000019246	1636 (aa)	-	-
ENSPNYT00000019673	-	6238	XM_013911262	ENSPNYP00000019192	1572 (aa)	XP_013766716	-

Gene Model

Click here to download ENSPNYG00000014477's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPNYG00000014477's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPNYG00000014477	tnrc6c1	100	54.691	ENSPNYG00000002582	tnrc6c2	100	55.811

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPNYG00000014477	tnrc6c1	98	52.977	ENSG00000078687	TNRC6C	100	47.406	Homo_sapiens
ENSPNYG00000014477	tnrc6c1	100	86.078	ENSAPOG00000019749	tnrc6c1	100	84.779	Acanthochromis_polyacanthus
ENSPNYG00000014477	tnrc6c1	98	51.308	ENSAMEG00000013756	TNRC6C	99	47.253	Ailuropoda_melanoleuca
ENSPNYG00000014477	tnrc6c1	100	88.436	ENSACIG00000008075	tnrc6c1	100	88.436	Amphilophus_citrinellus
ENSPNYG00000014477	tnrc6c1	100	86.567	ENSAOCG00000023968	tnrc6c1	100	87.141	Amphiprion_ocellaris
ENSPNYG00000014477	tnrc6c1	100	86.739	ENSAPEG00000009020	tnrc6c1	100	87.313	Amphiprion_percula
ENSPNYG00000014477	tnrc6c1	99	52.724	ENSAPLG00000005456	TNRC6C	94	47.512	Anas_platyrhynchos
ENSPNYG00000014477	tnrc6c1	99	49.048	ENSACAG00000016198	TNRC6C	92	47.983	Anolis_carolinensis
ENSPNYG00000014477	tnrc6c1	99	47.998	ENSANAG00000021554	TNRC6C	100	47.911	Aotus_nancymaae
ENSPNYG00000014477	tnrc6c1	100	97.960	ENSACLG00000000424	tnrc6c1	100	97.960	Astatotilapia_calliptera
ENSPNYG00000014477	tnrc6c1	97	51.655	ENSBTAG00000018658	TNRC6C	100	48.503	Bos_taurus
ENSPNYG00000014477	tnrc6c1	99	48.289	ENSCJAG00000019431	TNRC6C	100	47.614	Callithrix_jacchus
ENSPNYG00000014477	tnrc6c1	99	52.545	ENSCAFG00000005224	TNRC6C	90	51.328	Canis_familiaris
ENSPNYG00000014477	tnrc6c1	98	52.465	ENSCAFG00020006661	TNRC6C	96	50.068	Canis_lupus_dingo
ENSPNYG00000014477	tnrc6c1	98	52.171	ENSCHIG00000026004	TNRC6C	100	50.000	Capra_hircus
ENSPNYG00000014477	tnrc6c1	97	47.902	ENSTSYG00000005403	TNRC6C	100	49.471	Carlito_syrichta
ENSPNYG00000014477	tnrc6c1	94	49.599	ENSCAPG00000007307	TNRC6C	93	45.232	Cavia_aperea
ENSPNYG00000014477	tnrc6c1	94	53.558	ENSCPOG00000000467	TNRC6C	99	46.890	Cavia_porcellus
ENSPNYG00000014477	tnrc6c1	99	49.035	ENSCCAG00000030524	TNRC6C	100	47.884	Cebus_capucinus
ENSPNYG00000014477	tnrc6c1	99	48.421	ENSCATG00000033135	TNRC6C	100	49.194	Cercocebus_atys
ENSPNYG00000014477	tnrc6c1	98	51.809	ENSCLAG00000011139	TNRC6C	93	47.321	Chinchilla_lanigera
ENSPNYG00000014477	tnrc6c1	99	48.520	ENSCSAG00000005167	TNRC6C	93	48.278	Chlorocebus_sabaeus
ENSPNYG00000014477	tnrc6c1	63	67.227	ENSCHOG00000000088	TNRC6C	65	66.387	Choloepus_hoffmanni
ENSPNYG00000014477	tnrc6c1	100	47.460	ENSCPBG00000027960	TNRC6C	100	50.706	Chrysemys_picta_bellii
ENSPNYG00000014477	tnrc6c1	85	51.726	ENSCANG00000041771	TNRC6C	100	49.221	Colobus_angolensis_palliatus
ENSPNYG00000014477	tnrc6c1	99	46.053	ENSCGRG00001022686	Tnrc6c	100	48.673	Cricetulus_griseus_chok1gshd
ENSPNYG00000014477	tnrc6c1	99	46.162	ENSCGRG00000018041	Tnrc6c	100	48.673	Cricetulus_griseus_crigri
ENSPNYG00000014477	tnrc6c1	100	77.592	ENSCSEG00000012744	tnrc6c1	95	76.369	Cynoglossus_semilaevis
ENSPNYG00000014477	tnrc6c1	94	74.041	ENSDARG00000076847	tnrc6c1	99	60.693	Danio_rerio
ENSPNYG00000014477	tnrc6c1	99	48.248	ENSDNOG00000003247	TNRC6C	96	47.579	Dasypus_novemcinctus
ENSPNYG00000014477	tnrc6c1	84	49.352	ENSDORG00000004558	Tnrc6c	95	48.623	Dipodomys_ordii
ENSPNYG00000014477	tnrc6c1	86	53.086	ENSETEG00000005527	TNRC6C	82	52.231	Echinops_telfairi
ENSPNYG00000014477	tnrc6c1	91	50.200	ENSEASG00005004799	TNRC6C	100	47.439	Equus_asinus_asinus
ENSPNYG00000014477	tnrc6c1	98	52.049	ENSECAG00000012486	TNRC6C	93	47.586	Equus_caballus
ENSPNYG00000014477	tnrc6c1	92	55.665	ENSEEUG00000010008	TNRC6C	94	51.267	Erinaceus_europaeus
ENSPNYG00000014477	tnrc6c1	99	51.284	ENSFCAG00000028358	TNRC6C	100	47.632	Felis_catus
ENSPNYG00000014477	tnrc6c1	89	53.127	ENSFALG00000000848	TNRC6C	100	48.584	Ficedula_albicollis
ENSPNYG00000014477	tnrc6c1	100	48.701	ENSFDAG00000010368	TNRC6C	95	51.158	Fukomys_damarensis
ENSPNYG00000014477	tnrc6c1	100	80.647	ENSFHEG00000002936	tnrc6c1	100	79.988	Fundulus_heteroclitus
ENSPNYG00000014477	tnrc6c1	96	55.085	ENSGALG00000001725	TNRC6C	100	50.623	Gallus_gallus
ENSPNYG00000014477	tnrc6c1	100	81.756	ENSGAFG00000019019	tnrc6c1	100	81.083	Gambusia_affinis
ENSPNYG00000014477	tnrc6c1	100	73.709	ENSGACG00000012320	tnrc6c1	92	72.753	Gasterosteus_aculeatus
ENSPNYG00000014477	tnrc6c1	100	48.842	ENSGAGG00000022043	TNRC6C	100	48.356	Gopherus_agassizii
ENSPNYG00000014477	tnrc6c1	99	51.687	ENSGGOG00000011304	TNRC6C	100	47.572	Gorilla_gorilla
ENSPNYG00000014477	tnrc6c1	100	99.365	ENSHBUG00000010846	tnrc6c1	100	99.365	Haplochromis_burtoni
ENSPNYG00000014477	tnrc6c1	99	52.206	ENSHGLG00000004809	TNRC6C	90	50.513	Heterocephalus_glaber_female
ENSPNYG00000014477	tnrc6c1	99	51.617	ENSHGLG00100012597	TNRC6C	90	50.068	Heterocephalus_glaber_male
ENSPNYG00000014477	tnrc6c1	100	61.862	ENSIPUG00000000818	tnrc6c1	94	60.145	Ictalurus_punctatus
ENSPNYG00000014477	tnrc6c1	97	52.189	ENSSTOG00000009101	TNRC6C	93	51.486	Ictidomys_tridecemlineatus
ENSPNYG00000014477	tnrc6c1	98	51.037	ENSJJAG00000017055	Tnrc6c	89	50.102	Jaculus_jaculus
ENSPNYG00000014477	tnrc6c1	100	74.101	ENSKMAG00000021023	tnrc6c1	100	74.658	Kryptolebias_marmoratus
ENSPNYG00000014477	tnrc6c1	70	62.176	ENSLACG00000015283	TNRC6C	95	66.480	Latimeria_chalumnae
ENSPNYG00000014477	tnrc6c1	99	77.939	ENSLOCG00000013377	tnrc6c1	89	78.374	Lepisosteus_oculatus
ENSPNYG00000014477	tnrc6c1	99	50.203	ENSLAFG00000011122	TNRC6C	98	63.412	Loxodonta_africana
ENSPNYG00000014477	tnrc6c1	99	48.421	ENSMFAG00000043943	TNRC6C	100	49.194	Macaca_fascicularis
ENSPNYG00000014477	tnrc6c1	99	48.626	ENSMMUG00000011924	TNRC6C	100	48.024	Macaca_mulatta
ENSPNYG00000014477	tnrc6c1	99	48.421	ENSMNEG00000030405	TNRC6C	100	48.024	Macaca_nemestrina
ENSPNYG00000014477	tnrc6c1	99	48.421	ENSMLEG00000033436	TNRC6C	100	49.194	Mandrillus_leucophaeus
ENSPNYG00000014477	tnrc6c1	100	81.095	ENSMAMG00000023613	tnrc6c1	100	80.747	Mastacembelus_armatus
ENSPNYG00000014477	tnrc6c1	100	99.824	ENSMZEG00005010920	tnrc6c1	100	99.824	Maylandia_zebra
ENSPNYG00000014477	tnrc6c1	90	67.616	ENSMGAG00000003906	TNRC6C	83	67.616	Meleagris_gallopavo
ENSPNYG00000014477	tnrc6c1	91	49.572	ENSMAUG00000021618	Tnrc6c	95	50.034	Mesocricetus_auratus
ENSPNYG00000014477	tnrc6c1	100	47.701	ENSMICG00000003952	TNRC6C	100	49.111	Microcebus_murinus
ENSPNYG00000014477	tnrc6c1	99	49.375	ENSMOCG00000015879	Tnrc6c	96	50.034	Microtus_ochrogaster
ENSPNYG00000014477	tnrc6c1	100	80.444	ENSMMOG00000005203	tnrc6c1	100	80.506	Mola_mola
ENSPNYG00000014477	tnrc6c1	99	47.285	ENSMODG00000001785	TNRC6C	93	50.000	Monodelphis_domestica
ENSPNYG00000014477	tnrc6c1	97	51.150	MGP_CAROLIEiJ_G0017465	Tnrc6c	99	46.681	Mus_caroli
ENSPNYG00000014477	tnrc6c1	97	50.132	ENSMUSG00000025571	Tnrc6c	99	46.713	Mus_musculus
ENSPNYG00000014477	tnrc6c1	99	49.704	MGP_PahariEiJ_G0018593	Tnrc6c	99	46.656	Mus_pahari
ENSPNYG00000014477	tnrc6c1	99	49.011	MGP_SPRETEiJ_G0018309	Tnrc6c	99	46.498	Mus_spretus
ENSPNYG00000014477	tnrc6c1	99	51.937	ENSMPUG00000013348	TNRC6C	90	52.008	Mustela_putorius_furo
ENSPNYG00000014477	tnrc6c1	93	53.166	ENSMLUG00000014431	TNRC6C	92	45.814	Myotis_lucifugus
ENSPNYG00000014477	tnrc6c1	85	50.606	ENSNGAG00000012203	Tnrc6c	90	49.694	Nannospalax_galili
ENSPNYG00000014477	tnrc6c1	100	98.730	ENSNBRG00000005344	tnrc6c1	100	96.954	Neolamprologus_brichardi
ENSPNYG00000014477	tnrc6c1	99	47.178	ENSNLEG00000000047	TNRC6C	93	48.963	Nomascus_leucogenys
ENSPNYG00000014477	tnrc6c1	93	58.292	ENSMEUG00000005104	TNRC6C	96	56.585	Notamacropus_eugenii
ENSPNYG00000014477	tnrc6c1	99	52.546	ENSODEG00000012499	TNRC6C	97	51.088	Octodon_degus
ENSPNYG00000014477	tnrc6c1	100	97.778	ENSONIG00000002210	tnrc6c1	100	97.778	Oreochromis_niloticus
ENSPNYG00000014477	tnrc6c1	78	48.081	ENSOANG00000009758	-	67	50.331	Ornithorhynchus_anatinus
ENSPNYG00000014477	tnrc6c1	53	55.882	ENSOCUG00000006122	TNRC6C	87	54.237	Oryctolagus_cuniculus
ENSPNYG00000014477	tnrc6c1	100	76.573	ENSORLG00000009837	tnrc6c1	100	83.636	Oryzias_latipes
ENSPNYG00000014477	tnrc6c1	100	76.742	ENSORLG00020016510	tnrc6c1	100	77.900	Oryzias_latipes_hni
ENSPNYG00000014477	tnrc6c1	78	73.604	ENSORLG00015000171	tnrc6c1	97	74.313	Oryzias_latipes_hsok
ENSPNYG00000014477	tnrc6c1	100	78.567	ENSOMEG00000000357	tnrc6c1	100	78.711	Oryzias_melastigma
ENSPNYG00000014477	tnrc6c1	95	50.067	ENSOGAG00000007197	TNRC6C	100	48.438	Otolemur_garnettii
ENSPNYG00000014477	tnrc6c1	94	50.666	ENSOARG00000006041	TNRC6C	92	46.200	Ovis_aries
ENSPNYG00000014477	tnrc6c1	98	52.945	ENSPPAG00000027160	TNRC6C	100	47.517	Pan_paniscus
ENSPNYG00000014477	tnrc6c1	85	51.216	ENSPPRG00000018881	TNRC6C	98	50.813	Panthera_pardus
ENSPNYG00000014477	tnrc6c1	85	55.778	ENSPTIG00000008791	TNRC6C	81	52.500	Panthera_tigris_altaica
ENSPNYG00000014477	tnrc6c1	98	52.945	ENSPTRG00000009699	TNRC6C	100	47.517	Pan_troglodytes
ENSPNYG00000014477	tnrc6c1	99	48.421	ENSPANG00000019994	TNRC6C	100	47.969	Papio_anubis
ENSPNYG00000014477	tnrc6c1	100	55.459	ENSPKIG00000005428	tnrc6c1	100	56.640	Paramormyrops_kingsleyae
ENSPNYG00000014477	tnrc6c1	97	52.209	ENSPSIG00000018069	TNRC6C	99	47.802	Pelodiscus_sinensis
ENSPNYG00000014477	tnrc6c1	93	79.365	ENSPMGG00000022911	tnrc6c1	98	80.723	Periophthalmus_magnuspinnatus
ENSPNYG00000014477	tnrc6c1	99	51.480	ENSPEMG00000009785	Tnrc6c	100	47.629	Peromyscus_maniculatus_bairdii
ENSPNYG00000014477	tnrc6c1	100	81.841	ENSPFOG00000012560	tnrc6c1	99	78.804	Poecilia_formosa
ENSPNYG00000014477	tnrc6c1	100	81.779	ENSPLAG00000021055	tnrc6c1	100	81.044	Poecilia_latipinna
ENSPNYG00000014477	tnrc6c1	98	53.302	ENSPPYG00000008679	TNRC6C	92	48.490	Pongo_abelii
ENSPNYG00000014477	tnrc6c1	84	61.822	ENSPCAG00000012510	TNRC6C	89	61.388	Procavia_capensis
ENSPNYG00000014477	tnrc6c1	100	48.093	ENSPCOG00000021451	TNRC6C	100	49.140	Propithecus_coquereli
ENSPNYG00000014477	tnrc6c1	86	66.949	ENSPVAG00000002008	TNRC6C	95	66.102	Pteropus_vampyrus
ENSPNYG00000014477	tnrc6c1	84	51.682	ENSRNOG00000022395	Tnrc6c	98	46.697	Rattus_norvegicus
ENSPNYG00000014477	tnrc6c1	99	48.421	ENSRBIG00000027777	TNRC6C	100	47.640	Rhinopithecus_bieti
ENSPNYG00000014477	tnrc6c1	99	48.421	ENSRROG00000042912	TNRC6C	100	47.640	Rhinopithecus_roxellana
ENSPNYG00000014477	tnrc6c1	99	48.448	ENSSBOG00000023981	TNRC6C	100	49.250	Saimiri_boliviensis_boliviensis
ENSPNYG00000014477	tnrc6c1	52	64.876	ENSSHAG00000018330	-	99	64.069	Sarcophilus_harrisii
ENSPNYG00000014477	tnrc6c1	55	62.693	ENSSFOG00015004735	-	99	67.095	Scleropages_formosus
ENSPNYG00000014477	tnrc6c1	100	60.340	ENSSFOG00015006475	tnrc6c1	96	58.082	Scleropages_formosus
ENSPNYG00000014477	tnrc6c1	100	81.988	ENSSMAG00000012761	tnrc6c1	100	80.870	Scophthalmus_maximus
ENSPNYG00000014477	tnrc6c1	100	84.276	ENSSDUG00000002366	tnrc6c1	98	83.016	Seriola_dumerili
ENSPNYG00000014477	tnrc6c1	100	84.152	ENSSLDG00000025613	tnrc6c1	100	84.381	Seriola_lalandi_dorsalis
ENSPNYG00000014477	tnrc6c1	83	61.654	ENSSARG00000006816	TNRC6C	90	66.387	Sorex_araneus
ENSPNYG00000014477	tnrc6c1	85	51.282	ENSSPUG00000007341	TNRC6C	90	52.449	Sphenodon_punctatus
ENSPNYG00000014477	tnrc6c1	98	85.120	ENSSPAG00000014977	tnrc6c1	97	85.490	Stegastes_partitus
ENSPNYG00000014477	tnrc6c1	84	47.308	ENSSSCG00000034373	TNRC6C	82	51.534	Sus_scrofa
ENSPNYG00000014477	tnrc6c1	95	53.103	ENSTGUG00000007733	TNRC6C	99	47.437	Taeniopygia_guttata
ENSPNYG00000014477	tnrc6c1	100	77.833	ENSTRUG00000011685	tnrc6c1	100	75.181	Takifugu_rubripes
ENSPNYG00000014477	tnrc6c1	100	72.491	ENSTNIG00000005273	tnrc6c1	100	78.357	Tetraodon_nigroviridis
ENSPNYG00000014477	tnrc6c1	69	48.780	ENSTBEG00000005046	TNRC6C	100	47.277	Tupaia_belangeri
ENSPNYG00000014477	tnrc6c1	97	51.997	ENSTTRG00000010828	TNRC6C	99	47.522	Tursiops_truncatus
ENSPNYG00000014477	tnrc6c1	98	51.191	ENSUMAG00000013614	TNRC6C	93	49.668	Ursus_maritimus
ENSPNYG00000014477	tnrc6c1	54	50.915	ENSVPAG00000006765	-	98	49.095	Vicugna_pacos
ENSPNYG00000014477	tnrc6c1	96	53.074	ENSVVUG00000015268	TNRC6C	96	51.679	Vulpes_vulpes
ENSPNYG00000014477	tnrc6c1	91	48.807	ENSXETG00000019470	tnrc6c	99	46.292	Xenopus_tropicalis
ENSPNYG00000014477	tnrc6c1	100	81.943	ENSXMAG00000025971	tnrc6c1	100	81.269	Xiphophorus_maculatus