EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPNYG00000014939 (Gene tree)
Gene ID: 102206323
Gene Symbol: sf3b1
Alias: tst|wu:fb99f09
Full Name: splicing factor 3b subunit 1
Gene Type: protein_coding
Species: Pundamilia_nyererei
Status: putative
Strand: Minus strand
Length: 16844 bases
Position: chrJH419381.1:568770-585613
Accession: 102206323
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPNYP00000019804	SF3b1	PF08920.10	9.1e-45	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPNYT00000020292	-	4858	XM_005746282	ENSPNYP00000019804	1311 (aa)	XP_005746339	UPI0003AFEBCF

Gene Model

Click here to download ENSPNYG00000014939's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPNYG00000014939's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPNYG00000014939	sf3b1	100	92.629	ENSG00000115524	SF3B1	100	92.781	Homo_sapiens
ENSPNYG00000014939	sf3b1	100	98.023	ENSAPOG00000011894	sf3b1	100	98.023	Acanthochromis_polyacanthus
ENSPNYG00000014939	sf3b1	99	92.584	ENSAMEG00000013809	SF3B1	99	92.737	Ailuropoda_melanoleuca
ENSPNYG00000014939	sf3b1	100	99.008	ENSACIG00000020910	sf3b1	97	99.008	Amphilophus_citrinellus
ENSPNYG00000014939	sf3b1	100	98.023	ENSAOCG00000004478	sf3b1	100	98.023	Amphiprion_ocellaris
ENSPNYG00000014939	sf3b1	100	98.023	ENSAPEG00000012937	sf3b1	100	98.023	Amphiprion_percula
ENSPNYG00000014939	sf3b1	100	97.565	ENSATEG00000020435	sf3b1	100	97.565	Anabas_testudineus
ENSPNYG00000014939	sf3b1	99	92.874	ENSAPLG00000003993	SF3B1	99	92.874	Anas_platyrhynchos
ENSPNYG00000014939	sf3b1	100	92.548	ENSACAG00000009612	SF3B1	100	92.548	Anolis_carolinensis
ENSPNYG00000014939	sf3b1	100	92.629	ENSANAG00000021577	SF3B1	100	94.264	Aotus_nancymaae
ENSPNYG00000014939	sf3b1	100	99.924	ENSACLG00000023470	sf3b1	100	99.924	Astatotilapia_calliptera
ENSPNYG00000014939	sf3b1	100	95.897	ENSAMXG00000002219	sf3b1	100	95.897	Astyanax_mexicanus
ENSPNYG00000014939	sf3b1	100	92.629	ENSBTAG00000008915	SF3B1	100	92.781	Bos_taurus
ENSPNYG00000014939	sf3b1	99	64.554	WBGene00011605	sftb-1	99	64.628	Caenorhabditis_elegans
ENSPNYG00000014939	sf3b1	100	92.629	ENSCJAG00000003902	SF3B1	100	92.781	Callithrix_jacchus
ENSPNYG00000014939	sf3b1	100	92.629	ENSCAFG00000010826	SF3B1	100	92.781	Canis_familiaris
ENSPNYG00000014939	sf3b1	100	92.629	ENSCAFG00020004750	SF3B1	100	92.781	Canis_lupus_dingo
ENSPNYG00000014939	sf3b1	100	92.629	ENSCHIG00000015226	SF3B1	100	92.781	Capra_hircus
ENSPNYG00000014939	sf3b1	100	92.553	ENSTSYG00000009214	SF3B1	100	92.705	Carlito_syrichta
ENSPNYG00000014939	sf3b1	99	92.530	ENSCAPG00000006547	SF3B1	99	92.683	Cavia_aperea
ENSPNYG00000014939	sf3b1	99	92.649	ENSCPOG00000009353	SF3B1	100	92.802	Cavia_porcellus
ENSPNYG00000014939	sf3b1	100	92.629	ENSCCAG00000020506	SF3B1	100	92.781	Cebus_capucinus
ENSPNYG00000014939	sf3b1	100	92.629	ENSCATG00000035735	SF3B1	100	92.781	Cercocebus_atys
ENSPNYG00000014939	sf3b1	99	92.655	ENSCLAG00000014767	SF3B1	99	92.808	Chinchilla_lanigera
ENSPNYG00000014939	sf3b1	100	92.629	ENSCSAG00000011505	SF3B1	100	92.781	Chlorocebus_sabaeus
ENSPNYG00000014939	sf3b1	76	91.676	ENSCHOG00000009860	SF3B1	76	91.676	Choloepus_hoffmanni
ENSPNYG00000014939	sf3b1	100	92.770	ENSCPBG00000021902	SF3B1	99	94.192	Chrysemys_picta_bellii
ENSPNYG00000014939	sf3b1	68	77.535	ENSCING00000002558	-	99	77.949	Ciona_intestinalis
ENSPNYG00000014939	sf3b1	99	79.774	ENSCSAVG00000002559	-	99	79.774	Ciona_savignyi
ENSPNYG00000014939	sf3b1	100	92.629	ENSCANG00000029415	SF3B1	100	92.781	Colobus_angolensis_palliatus
ENSPNYG00000014939	sf3b1	100	92.629	ENSCGRG00001016990	Sf3b1	100	92.781	Cricetulus_griseus_chok1gshd
ENSPNYG00000014939	sf3b1	100	92.629	ENSCGRG00000005301	Sf3b1	100	92.781	Cricetulus_griseus_crigri
ENSPNYG00000014939	sf3b1	100	92.998	ENSCSEG00000003860	sf3b1	100	92.998	Cynoglossus_semilaevis
ENSPNYG00000014939	sf3b1	96	97.229	ENSCVAG00000003680	sf3b1	99	97.229	Cyprinodon_variegatus
ENSPNYG00000014939	sf3b1	100	94.525	ENSDARG00000056138	sf3b1	100	94.525	Danio_rerio
ENSPNYG00000014939	sf3b1	100	92.559	ENSDNOG00000011754	SF3B1	100	92.711	Dasypus_novemcinctus
ENSPNYG00000014939	sf3b1	99	90.735	ENSDORG00000002399	Sf3b1	100	90.735	Dipodomys_ordii
ENSPNYG00000014939	sf3b1	100	76.026	FBgn0031266	Sf3b1	100	76.026	Drosophila_melanogaster
ENSPNYG00000014939	sf3b1	83	91.284	ENSETEG00000009188	SF3B1	100	91.468	Echinops_telfairi
ENSPNYG00000014939	sf3b1	99	85.290	ENSEBUG00000004325	sf3b1	100	88.296	Eptatretus_burgeri
ENSPNYG00000014939	sf3b1	100	92.629	ENSEASG00005020159	SF3B1	98	92.781	Equus_asinus_asinus
ENSPNYG00000014939	sf3b1	100	92.629	ENSECAG00000021657	SF3B1	98	92.781	Equus_caballus
ENSPNYG00000014939	sf3b1	81	100.000	ENSEEUG00000000836	SF3B1	81	100.000	Erinaceus_europaeus
ENSPNYG00000014939	sf3b1	100	95.015	ENSELUG00000005977	sf3b1	98	95.015	Esox_lucius
ENSPNYG00000014939	sf3b1	100	92.629	ENSFCAG00000005038	SF3B1	100	92.781	Felis_catus
ENSPNYG00000014939	sf3b1	99	92.950	ENSFALG00000004281	SF3B1	99	92.950	Ficedula_albicollis
ENSPNYG00000014939	sf3b1	100	92.629	ENSFDAG00000017510	SF3B1	100	92.781	Fukomys_damarensis
ENSPNYG00000014939	sf3b1	100	96.426	ENSFHEG00000014333	sf3b1	100	96.426	Fundulus_heteroclitus
ENSPNYG00000014939	sf3b1	100	94.913	ENSGMOG00000006773	sf3b1	100	94.913	Gadus_morhua
ENSPNYG00000014939	sf3b1	100	92.846	ENSGALG00000008038	SF3B1	100	92.846	Gallus_gallus
ENSPNYG00000014939	sf3b1	98	97.375	ENSGAFG00000000704	sf3b1	100	97.375	Gambusia_affinis
ENSPNYG00000014939	sf3b1	100	95.669	ENSGACG00000008839	sf3b1	100	95.669	Gasterosteus_aculeatus
ENSPNYG00000014939	sf3b1	100	92.139	ENSGAGG00000017478	SF3B1	100	92.139	Gopherus_agassizii
ENSPNYG00000014939	sf3b1	99	87.366	ENSGGOG00000009264	SF3B1	99	87.596	Gorilla_gorilla
ENSPNYG00000014939	sf3b1	99	99.924	ENSHBUG00000007705	sf3b1	100	99.924	Haplochromis_burtoni
ENSPNYG00000014939	sf3b1	99	92.655	ENSHGLG00000008285	-	99	92.808	Heterocephalus_glaber_female
ENSPNYG00000014939	sf3b1	99	90.666	ENSHGLG00100005535	-	99	90.819	Heterocephalus_glaber_male
ENSPNYG00000014939	sf3b1	100	95.991	ENSHCOG00000016775	sf3b1	100	95.991	Hippocampus_comes
ENSPNYG00000014939	sf3b1	100	95.665	ENSIPUG00000013171	sf3b1	100	95.665	Ictalurus_punctatus
ENSPNYG00000014939	sf3b1	100	92.629	ENSSTOG00000011034	SF3B1	100	92.781	Ictidomys_tridecemlineatus
ENSPNYG00000014939	sf3b1	99	92.627	ENSJJAG00000010903	Sf3b1	99	92.780	Jaculus_jaculus
ENSPNYG00000014939	sf3b1	100	96.662	ENSKMAG00000004009	sf3b1	100	96.662	Kryptolebias_marmoratus
ENSPNYG00000014939	sf3b1	100	96.271	ENSLBEG00000022208	sf3b1	100	96.271	Labrus_bergylta
ENSPNYG00000014939	sf3b1	99	89.658	ENSLACG00000014832	SF3B1	99	89.658	Latimeria_chalumnae
ENSPNYG00000014939	sf3b1	100	94.247	ENSLOCG00000003899	sf3b1	100	94.247	Lepisosteus_oculatus
ENSPNYG00000014939	sf3b1	100	92.629	ENSLAFG00000001956	SF3B1	100	92.781	Loxodonta_africana
ENSPNYG00000014939	sf3b1	99	92.655	ENSMMUG00000022430	SF3B1	99	92.808	Macaca_mulatta
ENSPNYG00000014939	sf3b1	100	92.629	ENSMNEG00000042333	SF3B1	100	94.264	Macaca_nemestrina
ENSPNYG00000014939	sf3b1	94	88.084	ENSMLEG00000026141	SF3B1	98	87.961	Mandrillus_leucophaeus
ENSPNYG00000014939	sf3b1	100	97.641	ENSMAMG00000010241	sf3b1	100	97.641	Mastacembelus_armatus
ENSPNYG00000014939	sf3b1	100	99.924	ENSMZEG00005021254	sf3b1	100	99.924	Maylandia_zebra
ENSPNYG00000014939	sf3b1	99	92.337	ENSMGAG00000007017	SF3B1	99	92.337	Meleagris_gallopavo
ENSPNYG00000014939	sf3b1	99	88.447	ENSMAUG00000009071	Sf3b1	99	88.600	Mesocricetus_auratus
ENSPNYG00000014939	sf3b1	100	92.629	ENSMICG00000013879	SF3B1	100	92.781	Microcebus_murinus
ENSPNYG00000014939	sf3b1	99	88.379	ENSMOCG00000000455	Sf3b1	99	88.379	Microtus_ochrogaster
ENSPNYG00000014939	sf3b1	84	96.997	ENSMMOG00000000475	sf3b1	100	96.997	Mola_mola
ENSPNYG00000014939	sf3b1	100	92.021	ENSMODG00000012275	SF3B1	100	92.173	Monodelphis_domestica
ENSPNYG00000014939	sf3b1	100	97.641	ENSMALG00000017211	sf3b1	100	97.641	Monopterus_albus
ENSPNYG00000014939	sf3b1	100	92.629	MGP_CAROLIEiJ_G0014141	Sf3b1	100	92.781	Mus_caroli
ENSPNYG00000014939	sf3b1	100	92.629	ENSMUSG00000025982	Sf3b1	100	92.781	Mus_musculus
ENSPNYG00000014939	sf3b1	100	92.629	MGP_SPRETEiJ_G0014947	Sf3b1	100	92.781	Mus_spretus
ENSPNYG00000014939	sf3b1	100	92.629	ENSMPUG00000007799	SF3B1	100	92.781	Mustela_putorius_furo
ENSPNYG00000014939	sf3b1	100	91.489	ENSMLUG00000000840	SF3B1	100	91.641	Myotis_lucifugus
ENSPNYG00000014939	sf3b1	99	92.378	ENSNGAG00000021884	-	100	92.530	Nannospalax_galili
ENSPNYG00000014939	sf3b1	100	94.597	ENSNBRG00000015816	sf3b1	100	94.597	Neolamprologus_brichardi
ENSPNYG00000014939	sf3b1	100	92.629	ENSNLEG00000006861	SF3B1	100	92.781	Nomascus_leucogenys
ENSPNYG00000014939	sf3b1	63	99.717	ENSMEUG00000015848	-	66	99.717	Notamacropus_eugenii
ENSPNYG00000014939	sf3b1	100	80.074	ENSOPRG00000008596	SF3B1	100	80.223	Ochotona_princeps
ENSPNYG00000014939	sf3b1	100	92.629	ENSODEG00000011153	-	100	92.781	Octodon_degus
ENSPNYG00000014939	sf3b1	100	99.924	ENSONIG00000013758	sf3b1	100	99.924	Oreochromis_niloticus
ENSPNYG00000014939	sf3b1	82	95.387	ENSOCUG00000012722	-	96	95.387	Oryctolagus_cuniculus
ENSPNYG00000014939	sf3b1	100	96.956	ENSORLG00000020219	sf3b1	100	96.956	Oryzias_latipes
ENSPNYG00000014939	sf3b1	100	96.956	ENSORLG00020001746	sf3b1	100	96.956	Oryzias_latipes_hni
ENSPNYG00000014939	sf3b1	64	94.899	ENSORLG00015001759	sf3b1	98	94.899	Oryzias_latipes_hsok
ENSPNYG00000014939	sf3b1	100	97.338	ENSOMEG00000019231	sf3b1	100	97.338	Oryzias_melastigma
ENSPNYG00000014939	sf3b1	100	92.629	ENSOARG00000015374	SF3B1	100	92.781	Ovis_aries
ENSPNYG00000014939	sf3b1	100	92.629	ENSPPAG00000035007	SF3B1	100	92.781	Pan_paniscus
ENSPNYG00000014939	sf3b1	100	92.629	ENSPPRG00000009090	SF3B1	100	92.781	Panthera_pardus
ENSPNYG00000014939	sf3b1	100	92.629	ENSPTIG00000021557	SF3B1	100	92.781	Panthera_tigris_altaica
ENSPNYG00000014939	sf3b1	99	85.267	ENSPTRG00000012771	SF3B1	99	85.344	Pan_troglodytes
ENSPNYG00000014939	sf3b1	100	92.629	ENSPANG00000013417	SF3B1	100	92.781	Papio_anubis
ENSPNYG00000014939	sf3b1	99	95.133	ENSPKIG00000000784	sf3b1	99	95.133	Paramormyrops_kingsleyae
ENSPNYG00000014939	sf3b1	99	91.718	ENSPSIG00000017222	SF3B1	98	91.718	Pelodiscus_sinensis
ENSPNYG00000014939	sf3b1	91	96.306	ENSPMGG00000004330	sf3b1	99	96.306	Periophthalmus_magnuspinnatus
ENSPNYG00000014939	sf3b1	99	92.655	ENSPEMG00000010699	Sf3b1	100	92.808	Peromyscus_maniculatus_bairdii
ENSPNYG00000014939	sf3b1	99	88.275	ENSPMAG00000001311	sf3b1	99	88.578	Petromyzon_marinus
ENSPNYG00000014939	sf3b1	100	92.097	ENSPCIG00000010642	SF3B1	100	92.249	Phascolarctos_cinereus
ENSPNYG00000014939	sf3b1	100	97.340	ENSPFOG00000000073	sf3b1	100	97.340	Poecilia_formosa
ENSPNYG00000014939	sf3b1	100	97.338	ENSPLAG00000002293	sf3b1	100	97.338	Poecilia_latipinna
ENSPNYG00000014939	sf3b1	100	97.414	ENSPMEG00000000446	sf3b1	98	97.414	Poecilia_mexicana
ENSPNYG00000014939	sf3b1	100	97.490	ENSPREG00000019652	sf3b1	100	97.490	Poecilia_reticulata
ENSPNYG00000014939	sf3b1	100	96.307	ENSPPYG00000013044	SF3B1	95	96.307	Pongo_abelii
ENSPNYG00000014939	sf3b1	100	92.477	ENSPCAG00000009292	SF3B1	100	92.629	Procavia_capensis
ENSPNYG00000014939	sf3b1	100	92.629	ENSPCOG00000024074	SF3B1	100	92.781	Propithecus_coquereli
ENSPNYG00000014939	sf3b1	100	92.629	ENSPVAG00000008302	SF3B1	100	92.781	Pteropus_vampyrus
ENSPNYG00000014939	sf3b1	100	95.821	ENSPNAG00000008288	sf3b1	100	95.821	Pygocentrus_nattereri
ENSPNYG00000014939	sf3b1	100	92.629	ENSRNOG00000013516	Sf3b1	100	92.781	Rattus_norvegicus
ENSPNYG00000014939	sf3b1	99	88.889	ENSRBIG00000026096	SF3B1	100	89.041	Rhinopithecus_bieti
ENSPNYG00000014939	sf3b1	100	92.629	ENSRROG00000031308	SF3B1	100	92.781	Rhinopithecus_roxellana
ENSPNYG00000014939	sf3b1	100	92.629	ENSSBOG00000020080	SF3B1	100	92.781	Saimiri_boliviensis_boliviensis
ENSPNYG00000014939	sf3b1	100	92.021	ENSSHAG00000017564	SF3B1	100	92.173	Sarcophilus_harrisii
ENSPNYG00000014939	sf3b1	100	95.437	ENSSFOG00015021535	sf3b1	100	95.437	Scleropages_formosus
ENSPNYG00000014939	sf3b1	99	96.737	ENSSMAG00000013977	sf3b1	99	96.737	Scophthalmus_maximus
ENSPNYG00000014939	sf3b1	100	97.717	ENSSDUG00000017422	sf3b1	100	97.717	Seriola_dumerili
ENSPNYG00000014939	sf3b1	100	97.641	ENSSLDG00000019495	sf3b1	100	97.641	Seriola_lalandi_dorsalis
ENSPNYG00000014939	sf3b1	75	98.768	ENSSARG00000007016	SF3B1	76	98.768	Sorex_araneus
ENSPNYG00000014939	sf3b1	100	92.542	ENSSPUG00000000410	SF3B1	100	92.542	Sphenodon_punctatus
ENSPNYG00000014939	sf3b1	100	98.174	ENSSPAG00000010451	sf3b1	99	98.174	Stegastes_partitus
ENSPNYG00000014939	sf3b1	89	94.264	ENSSSCG00000016075	SF3B1	100	94.264	Sus_scrofa
ENSPNYG00000014939	sf3b1	100	92.846	ENSTGUG00000010553	SF3B1	100	92.846	Taeniopygia_guttata
ENSPNYG00000014939	sf3b1	100	96.575	ENSTRUG00000015534	sf3b1	100	96.575	Takifugu_rubripes
ENSPNYG00000014939	sf3b1	84	96.384	ENSTBEG00000008714	SF3B1	93	96.384	Tupaia_belangeri
ENSPNYG00000014939	sf3b1	92	93.300	ENSTTRG00000003414	SF3B1	92	93.300	Tursiops_truncatus
ENSPNYG00000014939	sf3b1	94	81.789	ENSUAMG00000018506	SF3B1	99	97.773	Ursus_americanus
ENSPNYG00000014939	sf3b1	100	92.629	ENSUMAG00000020945	SF3B1	100	92.781	Ursus_maritimus
ENSPNYG00000014939	sf3b1	95	92.683	ENSVPAG00000005798	SF3B1	96	92.683	Vicugna_pacos
ENSPNYG00000014939	sf3b1	100	92.629	ENSVVUG00000025948	SF3B1	95	92.781	Vulpes_vulpes
ENSPNYG00000014939	sf3b1	100	91.109	ENSXETG00000013339	sf3b1	100	91.109	Xenopus_tropicalis
ENSPNYG00000014939	sf3b1	100	92.776	ENSXCOG00000018086	sf3b1	100	93.080	Xiphophorus_couchianus
ENSPNYG00000014939	sf3b1	100	97.262	ENSXMAG00000007369	sf3b1	100	97.304	Xiphophorus_maculatus