EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPNYG00000015355 (Gene tree)
Gene ID: 102192278
Gene Symbol: RAB29
Alias: RAB7L|RAB7L1
Full Name: ras-related protein Rab-7L1-like
Gene Type: protein_coding
Species: Pundamilia_nyererei
Status: putative
Strand: Plus strand
Length: 4041 bases
Position: chrJH419493.1:593600-597640
Accession: 102192278
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPNYP00000020294	MMR_HSR1	PF01926.23	1.7e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPNYT00000020793	RAB29-201	624	XM_005750807	ENSPNYP00000020294	207 (aa)	XP_005750864	UPI0003299C50

Gene Model

Click here to download ENSPNYG00000015355's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPNYG00000015355's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPNYG00000015355	RAB29	88	36.082	ENSPNYG00000013054	rab33ba	79	36.082
ENSPNYG00000015355	RAB29	99	32.110	ENSPNYG00000019644	rab11ba	95	32.110
ENSPNYG00000015355	RAB29	75	36.943	ENSPNYG00000000044	rab33a	64	36.943
ENSPNYG00000015355	RAB29	82	35.673	ENSPNYG00000022091	RAB15	78	35.673
ENSPNYG00000015355	RAB29	66	41.606	ENSPNYG00000018613	si:dkey-13a21.4	64	41.606
ENSPNYG00000015355	RAB29	92	45.876	ENSPNYG00000008014	rab32b	92	44.776
ENSPNYG00000015355	RAB29	85	36.158	ENSPNYG00000019276	-	81	36.158
ENSPNYG00000015355	RAB29	82	37.427	ENSPNYG00000000512	rab15	77	37.427
ENSPNYG00000015355	RAB29	99	30.415	ENSPNYG00000019611	-	95	30.415
ENSPNYG00000015355	RAB29	82	37.278	ENSPNYG00000001751	rab18b	80	37.278
ENSPNYG00000015355	RAB29	83	30.409	ENSPNYG00000013814	KRAS	87	30.409
ENSPNYG00000015355	RAB29	99	34.466	ENSPNYG00000007156	rab35b	98	34.466
ENSPNYG00000015355	RAB29	86	39.665	ENSPNYG00000004681	-	86	39.665
ENSPNYG00000015355	RAB29	82	35.882	ENSPNYG00000007520	-	77	35.882
ENSPNYG00000015355	RAB29	62	40.310	ENSPNYG00000017153	rab34b	68	41.270
ENSPNYG00000015355	RAB29	82	38.824	ENSPNYG00000008498	-	74	38.372
ENSPNYG00000015355	RAB29	85	34.286	ENSPNYG00000005809	-	84	34.286
ENSPNYG00000015355	RAB29	76	35.443	ENSPNYG00000015851	-	68	35.443
ENSPNYG00000015355	RAB29	81	35.260	ENSPNYG00000007314	-	78	35.260
ENSPNYG00000015355	RAB29	51	33.333	ENSPNYG00000023810	-	50	33.333
ENSPNYG00000015355	RAB29	99	31.193	ENSPNYG00000004098	rab11bb	95	31.193
ENSPNYG00000015355	RAB29	75	39.355	ENSPNYG00000019639	rab23	76	40.994
ENSPNYG00000015355	RAB29	83	34.104	ENSPNYG00000013288	rab41	79	34.104
ENSPNYG00000015355	RAB29	83	36.047	ENSPNYG00000015774	RAB39B	79	36.047
ENSPNYG00000015355	RAB29	77	34.375	ENSPNYG00000010861	rab6bb	77	34.375
ENSPNYG00000015355	RAB29	99	34.762	ENSPNYG00000010377	rab1ba	98	34.762
ENSPNYG00000015355	RAB29	85	36.000	ENSPNYG00000000233	rab9b	78	36.000
ENSPNYG00000015355	RAB29	83	30.409	ENSPNYG00000015124	hrasb	86	30.409
ENSPNYG00000015355	RAB29	91	32.979	ENSPNYG00000020409	RAB7A	88	32.979
ENSPNYG00000015355	RAB29	81	37.725	ENSPNYG00000015328	RAB9A	76	37.725
ENSPNYG00000015355	RAB29	99	33.645	ENSPNYG00000012426	rab2a	98	33.645
ENSPNYG00000015355	RAB29	81	39.053	ENSPNYG00000005654	rab12	67	39.053
ENSPNYG00000015355	RAB29	85	39.560	ENSPNYG00000003511	-	73	39.560
ENSPNYG00000015355	RAB29	83	33.140	ENSPNYG00000019963	rab6ba	87	33.140
ENSPNYG00000015355	RAB29	81	35.329	ENSPNYG00000007064	rab18a	80	34.911
ENSPNYG00000015355	RAB29	81	39.053	ENSPNYG00000023905	rab12	67	39.053
ENSPNYG00000015355	RAB29	95	31.818	ENSPNYG00000020556	rab6a	92	31.818
ENSPNYG00000015355	RAB29	99	34.928	ENSPNYG00000015841	-	98	34.928
ENSPNYG00000015355	RAB29	56	35.043	ENSPNYG00000005416	si:ch73-116o1.2	77	33.333
ENSPNYG00000015355	RAB29	66	30.882	ENSPNYG00000015445	arl8bb	69	30.882
ENSPNYG00000015355	RAB29	77	40.373	ENSPNYG00000009490	si:dkey-16l2.16	73	40.373
ENSPNYG00000015355	RAB29	87	35.165	ENSPNYG00000010325	rab42a	67	35.165
ENSPNYG00000015355	RAB29	73	38.961	ENSPNYG00000012922	zgc:101559	64	38.961
ENSPNYG00000015355	RAB29	66	30.147	ENSPNYG00000016248	arl8ba	69	30.147
ENSPNYG00000015355	RAB29	56	30.769	ENSPNYG00000007565	RAP2B	93	32.031
ENSPNYG00000015355	RAB29	99	34.928	ENSPNYG00000009172	rab1ab	98	34.928
ENSPNYG00000015355	RAB29	81	30.952	ENSPNYG00000011135	RAB17	71	30.952
ENSPNYG00000015355	RAB29	76	37.107	ENSPNYG00000009728	rab30	70	37.107
ENSPNYG00000015355	RAB29	76	36.709	ENSPNYG00000010612	rab5aa	70	36.709
ENSPNYG00000015355	RAB29	77	36.646	ENSPNYG00000005326	-	72	36.646
ENSPNYG00000015355	RAB29	99	31.280	ENSPNYG00000018244	rab11al	95	31.280
ENSPNYG00000015355	RAB29	76	35.443	ENSPNYG00000010615	rab5c	69	35.443
ENSPNYG00000015355	RAB29	91	33.333	ENSPNYG00000002252	rab11a	85	33.333

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPNYG00000015355	RAB29	100	76.442	ENSATEG00000024739	RAB29	100	76.442	Anabas_testudineus
ENSPNYG00000015355	RAB29	80	100.000	ENSACLG00000008602	RAB29	100	100.000	Astatotilapia_calliptera
ENSPNYG00000015355	RAB29	100	74.519	ENSCVAG00000014038	RAB29	100	74.519	Cyprinodon_variegatus
ENSPNYG00000015355	RAB29	83	56.395	ENSEBUG00000002259	RAB29	83	56.395	Eptatretus_burgeri
ENSPNYG00000015355	RAB29	90	71.505	ENSFHEG00000015993	RAB29	90	71.505	Fundulus_heteroclitus
ENSPNYG00000015355	RAB29	79	76.687	ENSGMOG00000018475	RAB29	98	76.687	Gadus_morhua
ENSPNYG00000015355	RAB29	100	73.430	ENSGAFG00000000629	RAB29	100	73.430	Gambusia_affinis
ENSPNYG00000015355	RAB29	100	75.000	ENSGACG00000010473	RAB29	99	75.000	Gasterosteus_aculeatus
ENSPNYG00000015355	RAB29	100	98.551	ENSHBUG00000012594	RAB29	100	98.551	Haplochromis_burtoni
ENSPNYG00000015355	RAB29	99	77.184	ENSKMAG00000017150	-	91	77.184	Kryptolebias_marmoratus
ENSPNYG00000015355	RAB29	99	77.778	ENSLBEG00000006152	-	100	77.778	Labrus_bergylta
ENSPNYG00000015355	RAB29	99	77.778	ENSLBEG00000018812	RAB29	100	77.778	Labrus_bergylta
ENSPNYG00000015355	RAB29	84	56.897	ENSLACG00000002523	RAB29	84	56.897	Latimeria_chalumnae
ENSPNYG00000015355	RAB29	100	76.923	ENSMAMG00000006963	RAB29	100	76.923	Mastacembelus_armatus
ENSPNYG00000015355	RAB29	100	100.000	ENSMZEG00005026799	RAB29	100	100.000	Maylandia_zebra
ENSPNYG00000015355	RAB29	100	78.365	ENSMALG00000018436	RAB29	90	78.365	Monopterus_albus
ENSPNYG00000015355	RAB29	77	98.125	ENSNBRG00000008714	RAB29	70	98.125	Neolamprologus_brichardi
ENSPNYG00000015355	RAB29	100	96.135	ENSONIG00000014892	RAB29	100	96.135	Oreochromis_niloticus
ENSPNYG00000015355	RAB29	100	77.404	ENSORLG00000027892	RAB29	100	77.404	Oryzias_latipes
ENSPNYG00000015355	RAB29	100	75.481	ENSORLG00020005240	RAB29	100	75.481	Oryzias_latipes_hni
ENSPNYG00000015355	RAB29	100	76.442	ENSORLG00015020441	-	100	76.442	Oryzias_latipes_hsok
ENSPNYG00000015355	RAB29	100	77.033	ENSOMEG00000000336	RAB29	100	77.033	Oryzias_melastigma
ENSPNYG00000015355	RAB29	85	74.857	ENSPMGG00000008290	-	97	70.619	Periophthalmus_magnuspinnatus
ENSPNYG00000015355	RAB29	100	69.082	ENSPFOG00000013066	RAB29	99	69.082	Poecilia_formosa
ENSPNYG00000015355	RAB29	99	69.118	ENSPLAG00000002600	RAB29	95	69.118	Poecilia_latipinna
ENSPNYG00000015355	RAB29	100	70.048	ENSPMEG00000021807	RAB29	100	70.048	Poecilia_mexicana
ENSPNYG00000015355	RAB29	100	71.014	ENSPREG00000020276	RAB29	100	71.014	Poecilia_reticulata
ENSPNYG00000015355	RAB29	100	76.923	ENSSDUG00000006543	RAB29	100	76.923	Seriola_dumerili
ENSPNYG00000015355	RAB29	83	55.556	ENSSPUG00000015007	RAB29	84	55.556	Sphenodon_punctatus
ENSPNYG00000015355	RAB29	100	74.038	ENSSPAG00000002062	RAB29	100	74.038	Stegastes_partitus
ENSPNYG00000015355	RAB29	100	73.077	ENSXCOG00000016370	RAB29	100	73.077	Xiphophorus_couchianus
ENSPNYG00000015355	RAB29	100	73.430	ENSXMAG00000029823	RAB29	100	73.430	Xiphophorus_maculatus