EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPNYG00000015399 (Gene tree)
Gene ID: 102192566
Gene Symbol: snrnp48
Alias: fd10a06|wu:fd10a06
Full Name: small nuclear ribonucleoprotein U11/U12 subunit 48
Gene Type: protein_coding
Species: Pundamilia_nyererei
Status: putative
Strand: Plus strand
Length: 6628 bases
Position: chrJH419494.1:2490-9117
Accession: 102192566
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPNYP00000020350	zf-U11-48K	PF05253.12	9.4e-09	1	1
ENSPNYP00000020362	zf-U11-48K	PF05253.12	1.2e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPNYT00000020863	-	861	-	ENSPNYP00000020362	286 (aa)	-	-
ENSPNYT00000020851	-	1179	XM_005750808	ENSPNYP00000020350	311 (aa)	XP_005750865	UPI0003AFA5B0

Gene Model

Click here to download ENSPNYG00000015399's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPNYG00000015399's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPNYG00000015399	snrnp48	92	45.918	ENSG00000168566	SNRNP48	85	39.062	Homo_sapiens
ENSPNYG00000015399	snrnp48	91	84.397	ENSAPOG00000021430	snrnp48	92	82.637	Acanthochromis_polyacanthus
ENSPNYG00000015399	snrnp48	90	46.552	ENSAMEG00000017349	SNRNP48	74	48.077	Ailuropoda_melanoleuca
ENSPNYG00000015399	snrnp48	96	80.872	ENSACIG00000002032	snrnp48	92	81.029	Amphilophus_citrinellus
ENSPNYG00000015399	snrnp48	91	82.270	ENSAOCG00000010562	snrnp48	92	81.029	Amphiprion_ocellaris
ENSPNYG00000015399	snrnp48	91	82.270	ENSAPEG00000003231	snrnp48	92	80.386	Amphiprion_percula
ENSPNYG00000015399	snrnp48	97	81.639	ENSATEG00000020210	snrnp48	92	80.323	Anabas_testudineus
ENSPNYG00000015399	snrnp48	83	49.638	ENSACAG00000002811	SNRNP48	62	53.960	Anolis_carolinensis
ENSPNYG00000015399	snrnp48	92	46.259	ENSANAG00000033538	SNRNP48	76	48.276	Aotus_nancymaae
ENSPNYG00000015399	snrnp48	99	57.419	ENSAMXG00000015309	snrnp48	77	62.353	Astyanax_mexicanus
ENSPNYG00000015399	snrnp48	100	42.813	ENSBTAG00000001123	SNRNP48	93	42.991	Bos_taurus
ENSPNYG00000015399	snrnp48	90	46.528	ENSCJAG00000021330	SNRNP48	75	48.627	Callithrix_jacchus
ENSPNYG00000015399	snrnp48	94	44.333	ENSCAFG00000009574	SNRNP48	64	45.455	Canis_familiaris
ENSPNYG00000015399	snrnp48	94	44.518	ENSCAFG00020013203	SNRNP48	74	47.266	Canis_lupus_dingo
ENSPNYG00000015399	snrnp48	88	45.091	ENSCHIG00000015216	SNRNP48	74	48.062	Capra_hircus
ENSPNYG00000015399	snrnp48	92	45.238	ENSTSYG00000000698	SNRNP48	76	47.126	Carlito_syrichta
ENSPNYG00000015399	snrnp48	87	43.478	ENSCAPG00000006768	SNRNP48	73	49.778	Cavia_aperea
ENSPNYG00000015399	snrnp48	99	42.985	ENSCPOG00000007910	SNRNP48	76	48.659	Cavia_porcellus
ENSPNYG00000015399	snrnp48	88	46.667	ENSCCAG00000035652	SNRNP48	75	48.627	Cebus_capucinus
ENSPNYG00000015399	snrnp48	95	45.098	ENSCATG00000033947	SNRNP48	97	33.133	Cercocebus_atys
ENSPNYG00000015399	snrnp48	92	47.279	ENSCLAG00000003765	SNRNP48	76	49.425	Chinchilla_lanigera
ENSPNYG00000015399	snrnp48	92	46.259	ENSCSAG00000007409	SNRNP48	76	48.276	Chlorocebus_sabaeus
ENSPNYG00000015399	snrnp48	84	45.675	ENSCPBG00000019146	SNRNP48	65	51.923	Chrysemys_picta_bellii
ENSPNYG00000015399	snrnp48	92	46.259	ENSCANG00000030017	SNRNP48	76	48.276	Colobus_angolensis_palliatus
ENSPNYG00000015399	snrnp48	90	45.329	ENSCGRG00001001076	-	75	47.266	Cricetulus_griseus_chok1gshd
ENSPNYG00000015399	snrnp48	90	39.655	ENSCGRG00001008805	-	88	37.011	Cricetulus_griseus_chok1gshd
ENSPNYG00000015399	snrnp48	90	45.329	ENSCGRG00000007781	Snrnp48	75	47.266	Cricetulus_griseus_crigri
ENSPNYG00000015399	snrnp48	84	73.664	ENSCSEG00000000722	snrnp48	89	69.231	Cynoglossus_semilaevis
ENSPNYG00000015399	snrnp48	100	78.730	ENSCVAG00000019829	snrnp48	78	80.795	Cyprinodon_variegatus
ENSPNYG00000015399	snrnp48	89	55.755	ENSDARG00000039989	snrnp48	92	54.777	Danio_rerio
ENSPNYG00000015399	snrnp48	92	46.980	ENSDNOG00000014978	SNRNP48	92	41.085	Dasypus_novemcinctus
ENSPNYG00000015399	snrnp48	99	43.452	ENSDORG00000015140	Snrnp48	76	48.092	Dipodomys_ordii
ENSPNYG00000015399	snrnp48	90	45.329	ENSEASG00005012021	SNRNP48	74	47.266	Equus_asinus_asinus
ENSPNYG00000015399	snrnp48	90	45.675	ENSECAG00000026937	SNRNP48	74	47.656	Equus_caballus
ENSPNYG00000015399	snrnp48	86	30.943	ENSEEUG00000015437	SNRNP48	76	30.916	Erinaceus_europaeus
ENSPNYG00000015399	snrnp48	96	60.256	ENSELUG00000009766	snrnp48	76	62.545	Esox_lucius
ENSPNYG00000015399	snrnp48	92	45.763	ENSFCAG00000018853	SNRNP48	76	47.710	Felis_catus
ENSPNYG00000015399	snrnp48	75	56.485	ENSFALG00000007797	SNRNP48	88	45.357	Ficedula_albicollis
ENSPNYG00000015399	snrnp48	92	46.939	ENSFDAG00000009231	SNRNP48	76	48.276	Fukomys_damarensis
ENSPNYG00000015399	snrnp48	71	81.448	ENSFHEG00000014647	snrnp48	91	79.468	Fundulus_heteroclitus
ENSPNYG00000015399	snrnp48	98	60.748	ENSGMOG00000018599	-	99	51.703	Gadus_morhua
ENSPNYG00000015399	snrnp48	83	53.030	ENSGALG00000013005	SNRNP48	88	52.273	Gallus_gallus
ENSPNYG00000015399	snrnp48	89	75.899	ENSGAFG00000021639	snrnp48	92	74.684	Gambusia_affinis
ENSPNYG00000015399	snrnp48	80	77.912	ENSGACG00000017756	-	95	61.610	Gasterosteus_aculeatus
ENSPNYG00000015399	snrnp48	84	45.329	ENSGAGG00000000865	SNRNP48	68	51.442	Gopherus_agassizii
ENSPNYG00000015399	snrnp48	92	46.259	ENSGGOG00000013220	SNRNP48	76	48.276	Gorilla_gorilla
ENSPNYG00000015399	snrnp48	100	99.357	ENSHBUG00000017066	snrnp48	91	99.357	Haplochromis_burtoni
ENSPNYG00000015399	snrnp48	92	45.918	ENSHGLG00000015241	SNRNP48	76	47.893	Heterocephalus_glaber_female
ENSPNYG00000015399	snrnp48	92	45.918	ENSHGLG00100010027	SNRNP48	76	47.893	Heterocephalus_glaber_male
ENSPNYG00000015399	snrnp48	81	75.494	ENSHCOG00000014066	snrnp48	92	70.253	Hippocampus_comes
ENSPNYG00000015399	snrnp48	92	46.599	ENSSTOG00000014635	SNRNP48	76	48.659	Ictidomys_tridecemlineatus
ENSPNYG00000015399	snrnp48	92	46.599	ENSJJAG00000011495	Snrnp48	76	48.276	Jaculus_jaculus
ENSPNYG00000015399	snrnp48	100	77.564	ENSKMAG00000016514	snrnp48	92	77.885	Kryptolebias_marmoratus
ENSPNYG00000015399	snrnp48	89	78.700	ENSLBEG00000026249	snrnp48	92	78.205	Labrus_bergylta
ENSPNYG00000015399	snrnp48	97	47.879	ENSLACG00000003958	SNRNP48	94	42.105	Latimeria_chalumnae
ENSPNYG00000015399	snrnp48	89	60.000	ENSLOCG00000004187	snrnp48	91	49.682	Lepisosteus_oculatus
ENSPNYG00000015399	snrnp48	92	45.424	ENSLAFG00000011152	SNRNP48	76	47.328	Loxodonta_africana
ENSPNYG00000015399	snrnp48	92	46.259	ENSMFAG00000045216	SNRNP48	88	39.844	Macaca_fascicularis
ENSPNYG00000015399	snrnp48	92	46.259	ENSMMUG00000014785	SNRNP48	76	48.276	Macaca_mulatta
ENSPNYG00000015399	snrnp48	92	46.259	ENSMNEG00000042269	SNRNP48	76	48.276	Macaca_nemestrina
ENSPNYG00000015399	snrnp48	92	46.259	ENSMLEG00000034004	SNRNP48	88	39.844	Mandrillus_leucophaeus
ENSPNYG00000015399	snrnp48	97	76.974	ENSMAMG00000018673	snrnp48	80	75.321	Mastacembelus_armatus
ENSPNYG00000015399	snrnp48	82	51.056	ENSMGAG00000006037	SNRNP48	90	51.661	Meleagris_gallopavo
ENSPNYG00000015399	snrnp48	89	45.775	ENSMAUG00000011944	Snrnp48	75	47.656	Mesocricetus_auratus
ENSPNYG00000015399	snrnp48	92	46.102	ENSMICG00000012497	SNRNP48	76	47.710	Microcebus_murinus
ENSPNYG00000015399	snrnp48	89	46.853	ENSMOCG00000015555	Snrnp48	76	48.837	Microtus_ochrogaster
ENSPNYG00000015399	snrnp48	60	83.684	ENSMMOG00000003072	-	60	83.684	Mola_mola
ENSPNYG00000015399	snrnp48	90	46.758	ENSMODG00000009996	SNRNP48	88	40.491	Monodelphis_domestica
ENSPNYG00000015399	snrnp48	89	81.227	ENSMALG00000005725	snrnp48	92	80.128	Monopterus_albus
ENSPNYG00000015399	snrnp48	90	45.329	MGP_CAROLIEiJ_G0018441	Snrnp48	75	47.656	Mus_caroli
ENSPNYG00000015399	snrnp48	90	45.329	ENSMUSG00000021431	Snrnp48	75	47.656	Mus_musculus
ENSPNYG00000015399	snrnp48	90	46.021	MGP_PahariEiJ_G0019509	Snrnp48	75	48.047	Mus_pahari
ENSPNYG00000015399	snrnp48	90	45.329	MGP_SPRETEiJ_G0019321	Snrnp48	75	47.656	Mus_spretus
ENSPNYG00000015399	snrnp48	97	43.963	ENSNGAG00000004849	Snrnp48	74	49.412	Nannospalax_galili
ENSPNYG00000015399	snrnp48	100	99.035	ENSNBRG00000012127	snrnp48	91	99.035	Neolamprologus_brichardi
ENSPNYG00000015399	snrnp48	92	46.259	ENSNLEG00000011667	SNRNP48	76	48.276	Nomascus_leucogenys
ENSPNYG00000015399	snrnp48	96	44.479	ENSOPRG00000015471	SNRNP48	78	49.012	Ochotona_princeps
ENSPNYG00000015399	snrnp48	100	97.106	ENSONIG00000001520	snrnp48	91	97.106	Oreochromis_niloticus
ENSPNYG00000015399	snrnp48	59	36.715	ENSOANG00000019888	-	99	37.198	Ornithorhynchus_anatinus
ENSPNYG00000015399	snrnp48	86	47.080	ENSOCUG00000005168	SNRNP48	84	48.276	Oryctolagus_cuniculus
ENSPNYG00000015399	snrnp48	95	79.798	ENSORLG00000015654	snrnp48	90	78.964	Oryzias_latipes
ENSPNYG00000015399	snrnp48	95	80.135	ENSORLG00020015976	snrnp48	77	79.288	Oryzias_latipes_hni
ENSPNYG00000015399	snrnp48	95	79.125	ENSORLG00015022379	snrnp48	77	78.317	Oryzias_latipes_hsok
ENSPNYG00000015399	snrnp48	93	78.472	ENSOMEG00000022007	snrnp48	90	77.670	Oryzias_melastigma
ENSPNYG00000015399	snrnp48	89	46.341	ENSOGAG00000005275	SNRNP48	76	48.425	Otolemur_garnettii
ENSPNYG00000015399	snrnp48	77	47.479	ENSOARG00000017319	SNRNP48	70	52.709	Ovis_aries
ENSPNYG00000015399	snrnp48	92	46.259	ENSPPAG00000032873	SNRNP48	76	48.276	Pan_paniscus
ENSPNYG00000015399	snrnp48	92	45.424	ENSPPRG00000004283	SNRNP48	76	47.328	Panthera_pardus
ENSPNYG00000015399	snrnp48	75	49.576	ENSPTIG00000013502	SNRNP48	70	52.709	Panthera_tigris_altaica
ENSPNYG00000015399	snrnp48	92	46.259	ENSPTRG00000017703	SNRNP48	76	48.276	Pan_troglodytes
ENSPNYG00000015399	snrnp48	92	46.259	ENSPANG00000000771	SNRNP48	97	31.707	Papio_anubis
ENSPNYG00000015399	snrnp48	95	57.099	ENSPKIG00000013703	snrnp48	51	65.145	Paramormyrops_kingsleyae
ENSPNYG00000015399	snrnp48	82	45.775	ENSPSIG00000002213	SNRNP48	64	53.659	Pelodiscus_sinensis
ENSPNYG00000015399	snrnp48	82	66.540	ENSPMGG00000008120	snrnp48	92	66.538	Periophthalmus_magnuspinnatus
ENSPNYG00000015399	snrnp48	90	46.713	ENSPEMG00000008872	Snrnp48	75	48.828	Peromyscus_maniculatus_bairdii
ENSPNYG00000015399	snrnp48	89	77.338	ENSPFOG00000003578	snrnp48	92	76.582	Poecilia_formosa
ENSPNYG00000015399	snrnp48	76	78.390	ENSPLAG00000002290	snrnp48	82	78.390	Poecilia_latipinna
ENSPNYG00000015399	snrnp48	89	77.338	ENSPMEG00000018033	snrnp48	92	76.582	Poecilia_mexicana
ENSPNYG00000015399	snrnp48	88	76.727	ENSPREG00000018541	snrnp48	92	75.000	Poecilia_reticulata
ENSPNYG00000015399	snrnp48	92	45.578	ENSPPYG00000016209	SNRNP48	76	47.510	Pongo_abelii
ENSPNYG00000015399	snrnp48	78	38.095	ENSPCAG00000011991	SNRNP48	94	37.891	Procavia_capensis
ENSPNYG00000015399	snrnp48	92	47.297	ENSPVAG00000002854	SNRNP48	76	49.049	Pteropus_vampyrus
ENSPNYG00000015399	snrnp48	90	46.367	ENSRNOG00000013756	Snrnp48	75	48.438	Rattus_norvegicus
ENSPNYG00000015399	snrnp48	90	46.713	ENSRBIG00000043856	SNRNP48	82	48.276	Rhinopithecus_bieti
ENSPNYG00000015399	snrnp48	92	46.259	ENSRROG00000043229	SNRNP48	76	48.276	Rhinopithecus_roxellana
ENSPNYG00000015399	snrnp48	92	46.599	ENSSBOG00000019486	SNRNP48	76	48.659	Saimiri_boliviensis_boliviensis
ENSPNYG00000015399	snrnp48	99	42.295	ENSSHAG00000014483	SNRNP48	94	40.120	Sarcophilus_harrisii
ENSPNYG00000015399	snrnp48	80	59.924	ENSSFOG00015006610	snrnp48	76	49.387	Scleropages_formosus
ENSPNYG00000015399	snrnp48	95	80.135	ENSSDUG00000014953	snrnp48	92	79.421	Seriola_dumerili
ENSPNYG00000015399	snrnp48	95	80.135	ENSSLDG00000005989	snrnp48	92	79.421	Seriola_lalandi_dorsalis
ENSPNYG00000015399	snrnp48	84	47.482	ENSSPUG00000006257	SNRNP48	82	45.862	Sphenodon_punctatus
ENSPNYG00000015399	snrnp48	91	85.106	ENSSPAG00000006454	snrnp48	92	83.601	Stegastes_partitus
ENSPNYG00000015399	snrnp48	83	50.877	ENSTGUG00000007575	SNRNP48	66	58.571	Taeniopygia_guttata
ENSPNYG00000015399	snrnp48	81	74.510	ENSTRUG00000007031	snrnp48	92	71.019	Takifugu_rubripes
ENSPNYG00000015399	snrnp48	99	69.231	ENSTNIG00000012977	-	90	65.823	Tetraodon_nigroviridis
ENSPNYG00000015399	snrnp48	87	45.353	ENSTBEG00000015620	SNRNP48	76	47.893	Tupaia_belangeri
ENSPNYG00000015399	snrnp48	84	47.037	ENSTTRG00000016715	SNRNP48	76	48.077	Tursiops_truncatus
ENSPNYG00000015399	snrnp48	94	45.667	ENSUAMG00000003690	SNRNP48	76	48.077	Ursus_americanus
ENSPNYG00000015399	snrnp48	78	46.444	ENSVPAG00000003557	SNRNP48	70	52.217	Vicugna_pacos
ENSPNYG00000015399	snrnp48	94	44.518	ENSVVUG00000004996	SNRNP48	74	47.266	Vulpes_vulpes
ENSPNYG00000015399	snrnp48	97	44.918	ENSXETG00000020447	snrnp48	83	45.791	Xenopus_tropicalis
ENSPNYG00000015399	snrnp48	76	77.637	ENSXCOG00000004478	snrnp48	92	59.935	Xiphophorus_couchianus
ENSPNYG00000015399	snrnp48	89	76.978	ENSXMAG00000013595	snrnp48	92	75.949	Xiphophorus_maculatus