EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPNYG00000015874 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: probable ribonuclease ZC3H12C
Gene Type: protein_coding
Species: Pundamilia_nyererei
Status: putative
Strand: Minus strand
Length: 1478 bases
Position: chrJH419245.1:479807-481284
Accession: 102204494
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPNYP00000020980	RNase_Zc3h12a	PF11977.8	8.3e-59	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPNYT00000021484	-	807	XM_005730887	ENSPNYP00000020980	268 (aa)	XP_005730944	-

Gene Model

Click here to download ENSPNYG00000015874's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPNYG00000015874's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPNYG00000015874	-	85	73.684	ENSPNYG00000007151	-	90	66.887

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPNYG00000015874	-	78	76.395	ENSACIG00000005689	-	73	77.056	Amphilophus_citrinellus
ENSPNYG00000015874	-	79	74.123	ENSAPLG00000003874	ZC3H12B	78	74.123	Anas_platyrhynchos
ENSPNYG00000015874	-	79	76.233	ENSCSAG00000011955	-	67	76.233	Chlorocebus_sabaeus
ENSPNYG00000015874	-	79	75.785	ENSECAG00000020993	ZC3H12B	67	75.785	Equus_caballus
ENSPNYG00000015874	-	79	74.561	ENSFALG00000004293	ZC3H12B	56	74.561	Ficedula_albicollis
ENSPNYG00000015874	-	78	78.603	ENSFHEG00000014717	-	60	79.295	Fundulus_heteroclitus
ENSPNYG00000015874	-	78	77.632	ENSHBUG00000003376	-	91	67.114	Haplochromis_burtoni
ENSPNYG00000015874	-	78	83.254	ENSHCOG00000017425	-	76	69.655	Hippocampus_comes
ENSPNYG00000015874	-	77	85.507	ENSMALG00000016807	-	85	67.123	Monopterus_albus
ENSPNYG00000015874	-	79	76.233	ENSMUSG00000035045	Zc3h12b	66	91.429	Mus_musculus
ENSPNYG00000015874	-	93	66.667	ENSORLG00020019033	-	82	75.000	Oryzias_latipes_hni
ENSPNYG00000015874	-	78	74.569	ENSORLG00015020619	-	87	73.840	Oryzias_latipes_hsok
ENSPNYG00000015874	-	78	76.856	ENSPLAG00000011687	-	76	77.533	Poecilia_latipinna
ENSPNYG00000015874	-	79	76.682	ENSRNOG00000011508	Zc3h12b	68	76.682	Rattus_norvegicus
ENSPNYG00000015874	-	83	72.269	ENSSDUG00000014078	zc3h12b	88	72.269	Seriola_dumerili
ENSPNYG00000015874	-	78	83.254	ENSXCOG00000007996	-	83	77.093	Xiphophorus_couchianus