EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSPNYG00000016316 (Gene tree)
Gene ID
102215177
Gene Symbol
rpa1
Alias
wu:fi14b08|zgc:55337|zgc:77092
Full Name
replication protein A 70 kDa DNA-binding subunit-like
Gene Type
protein_coding
Species
Pundamilia_nyererei
Status
putative
Strand
Minus strand
Length
29273 bases
Position
chrJH419296.1:1814297-1843569
Accession
102215177
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSPNYP00000021659tRNA_anti-codonPF01336.251.6e-1211
ENSPNYP00000021640tRNA_anti-codonPF01336.252e-1211
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSPNYT00000022164-2810XM_005739368ENSPNYP00000021640602 (aa)XP_005739425UPI0003AF78FF
ENSPNYT00000022187-1677-ENSPNYP00000021659558 (aa)--
Gene Model
Click here to download ENSPNYG00000016316's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSPNYG00000016316's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSPNYG00000016316rpa19963.150ENSPNYG00000024165RPA19963.150
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSPNYG00000016316rpa19988.519ENSAPOG00000011658rpa110088.519Acanthochromis_polyacanthus
ENSPNYG00000016316rpa19470.588ENSAPOG00000019409RPA18870.588Acanthochromis_polyacanthus
ENSPNYG00000016316rpa19964.298ENSAMEG00000007706RPA19664.815Ailuropoda_melanoleuca
ENSPNYG00000016316rpa19963.605ENSACIG00000012881RPA19963.032Amphilophus_citrinellus
ENSPNYG00000016316rpa110081.272ENSACIG00000007277rpa110084.775Amphilophus_citrinellus
ENSPNYG00000016316rpa19989.517ENSAOCG00000023376rpa110089.517Amphiprion_ocellaris
ENSPNYG00000016316rpa19960.131ENSAOCG00000009003RPA19959.225Amphiprion_ocellaris
ENSPNYG00000016316rpa19989.517ENSAPEG00000008634rpa110089.517Amphiprion_percula
ENSPNYG00000016316rpa19372.311ENSAPEG00000019132RPA19958.182Amphiprion_percula
ENSPNYG00000016316rpa19961.075ENSATEG00000006443RPA19961.051Anabas_testudineus
ENSPNYG00000016316rpa19989.606ENSATEG00000022024rpa19989.606Anabas_testudineus
ENSPNYG00000016316rpa19955.385ENSAPLG00000012442RPA110055.835Anas_platyrhynchos
ENSPNYG00000016316rpa19958.348ENSACAG00000014490RPA19858.843Anolis_carolinensis
ENSPNYG00000016316rpa19964.937ENSANAG00000023456RPA19864.250Aotus_nancymaae
ENSPNYG00000016316rpa199100.000ENSACLG00000006640rpa1100100.000Astatotilapia_calliptera
ENSPNYG00000016316rpa19963.307ENSACLG00000005223RPA19963.307Astatotilapia_calliptera
ENSPNYG00000016316rpa19979.633ENSAMXG00000008418rpa19979.800Astyanax_mexicanus
ENSPNYG00000016316rpa19963.605ENSBTAG00000009711RPA19962.848Bos_taurus
ENSPNYG00000016316rpa17733.410WBGene00017546rpa-16533.410Caenorhabditis_elegans
ENSPNYG00000016316rpa19962.392ENSCJAG00000001848RPA19962.255Callithrix_jacchus
ENSPNYG00000016316rpa19963.175ENSCAFG00000019249RPA19963.502Canis_familiaris
ENSPNYG00000016316rpa19963.175ENSCAFG00020009847RPA19963.502Canis_lupus_dingo
ENSPNYG00000016316rpa19964.125ENSCHIG00000026308RPA19963.339Capra_hircus
ENSPNYG00000016316rpa19963.778ENSTSYG00000003482-9962.541Carlito_syrichta
ENSPNYG00000016316rpa19963.778ENSCPOG00000000035RPA19963.089Cavia_porcellus
ENSPNYG00000016316rpa19952.414ENSCCAG00000010981RPA19952.683Cebus_capucinus
ENSPNYG00000016316rpa19959.446ENSCLAG00000015045-9959.446Chinchilla_lanigera
ENSPNYG00000016316rpa19963.258ENSCLAG00000005185-9963.089Chinchilla_lanigera
ENSPNYG00000016316rpa19953.571ENSCSAG00000013833RPA19953.571Chlorocebus_sabaeus
ENSPNYG00000016316rpa19962.847ENSCHOG00000013540-9962.988Choloepus_hoffmanni
ENSPNYG00000016316rpa17871.560ENSCHOG00000009454-9971.560Choloepus_hoffmanni
ENSPNYG00000016316rpa19965.043ENSCPBG00000020377RPA19966.021Chrysemys_picta_bellii
ENSPNYG00000016316rpa19944.610ENSCING00000023482-9944.610Ciona_intestinalis
ENSPNYG00000016316rpa19966.011ENSCANG00000030911RPA19963.682Colobus_angolensis_palliatus
ENSPNYG00000016316rpa19963.558ENSCGRG00001008197Rpa19962.806Cricetulus_griseus_chok1gshd
ENSPNYG00000016316rpa18169.978ENSCGRG00000000582Rpa19965.217Cricetulus_griseus_crigri
ENSPNYG00000016316rpa19957.338ENSCSEG00000012726RPA19958.834Cynoglossus_semilaevis
ENSPNYG00000016316rpa19981.518ENSCSEG00000013066rpa19981.518Cynoglossus_semilaevis
ENSPNYG00000016316rpa19985.974ENSCVAG00000019431rpa19986.139Cyprinodon_variegatus
ENSPNYG00000016316rpa18971.981ENSCVAG00000013446-9658.787Cyprinodon_variegatus
ENSPNYG00000016316rpa19977.129ENSDARG00000003938rpa19977.129Danio_rerio
ENSPNYG00000016316rpa19964.757ENSDNOG00000017218RPA19664.587Dasypus_novemcinctus
ENSPNYG00000016316rpa19964.583ENSDORG00000006199Rpa19964.120Dipodomys_ordii
ENSPNYG00000016316rpa19941.975FBgn0010173RpA-709941.830Drosophila_melanogaster
ENSPNYG00000016316rpa18274.227ENSETEG00000017608RPA18272.000Echinops_telfairi
ENSPNYG00000016316rpa19965.771ENSEASG00005009372RPA19965.950Equus_asinus_asinus
ENSPNYG00000016316rpa19964.062ENSECAG00000023886RPA19963.502Equus_caballus
ENSPNYG00000016316rpa17571.122ENSEEUG00000002186-6871.122Erinaceus_europaeus
ENSPNYG00000016316rpa19981.023ENSELUG00000021071rpa19981.023Esox_lucius
ENSPNYG00000016316rpa19464.972ENSELUG00000006136RPA19964.972Esox_lucius
ENSPNYG00000016316rpa19964.298ENSFCAG00000006306RPA19963.725Felis_catus
ENSPNYG00000016316rpa19963.715ENSFALG00000006575RPA19963.562Ficedula_albicollis
ENSPNYG00000016316rpa19964.410ENSFDAG00000007720RPA19963.889Fukomys_damarensis
ENSPNYG00000016316rpa19985.762ENSFHEG00000003580rpa19985.762Fundulus_heteroclitus
ENSPNYG00000016316rpa19978.919ENSGMOG00000010382rpa19976.884Gadus_morhua
ENSPNYG00000016316rpa19963.240ENSGALG00000003072RPA19962.726Gallus_gallus
ENSPNYG00000016316rpa19985.833ENSGAFG00000012916rpa19985.833Gambusia_affinis
ENSPNYG00000016316rpa19960.065ENSGAFG00000020953RPA19959.146Gambusia_affinis
ENSPNYG00000016316rpa19984.551ENSGACG00000010856rpa19984.551Gasterosteus_aculeatus
ENSPNYG00000016316rpa19964.696ENSGAGG00000013611RPA19964.532Gopherus_agassizii
ENSPNYG00000016316rpa19965.771ENSGGOG00000014186RPA19963.394Gorilla_gorilla
ENSPNYG00000016316rpa110099.821ENSHBUG00000017773rpa110099.668Haplochromis_burtoni
ENSPNYG00000016316rpa19959.717ENSHBUG00000009348RPA19759.717Haplochromis_burtoni
ENSPNYG00000016316rpa19963.542ENSHGLG00000008846RPA19963.399Heterocephalus_glaber_female
ENSPNYG00000016316rpa19963.542ENSHGLG00100017755-9963.399Heterocephalus_glaber_male
ENSPNYG00000016316rpa19959.375ENSHGLG00100000799-9958.987Heterocephalus_glaber_male
ENSPNYG00000016316rpa19954.167ENSHGLG00100002005-9953.922Heterocephalus_glaber_male
ENSPNYG00000016316rpa19946.786ENSHCOG00000000351RPA19944.901Hippocampus_comes
ENSPNYG00000016316rpa19975.490ENSHCOG00000001401rpa19975.490Hippocampus_comes
ENSPNYG00000016316rpa19978.347ENSIPUG00000004400rpa19978.347Ictalurus_punctatus
ENSPNYG00000016316rpa19762.257ENSSTOG00000022475RPA19562.676Ictidomys_tridecemlineatus
ENSPNYG00000016316rpa19963.778ENSJJAG00000000876Rpa19864.636Jaculus_jaculus
ENSPNYG00000016316rpa19962.566ENSKMAG00000000234RPA19961.120Kryptolebias_marmoratus
ENSPNYG00000016316rpa19983.306ENSKMAG00000005605rpa19983.470Kryptolebias_marmoratus
ENSPNYG00000016316rpa19985.455ENSLBEG00000021604rpa110085.455Labrus_bergylta
ENSPNYG00000016316rpa19772.018ENSLBEG00000002281RPA18372.018Labrus_bergylta
ENSPNYG00000016316rpa18263.871ENSLACG00000007210RPA19962.090Latimeria_chalumnae
ENSPNYG00000016316rpa19973.884ENSLOCG00000006397rpa19974.050Lepisosteus_oculatus
ENSPNYG00000016316rpa19963.419ENSLAFG00000015354RPA19961.935Loxodonta_africana
ENSPNYG00000016316rpa18261.378ENSMFAG00000036138-9862.020Macaca_fascicularis
ENSPNYG00000016316rpa19964.125ENSMMUG00000011604-9864.587Macaca_mulatta
ENSPNYG00000016316rpa19959.754ENSMMUG00000002442-9958.320Macaca_mulatta
ENSPNYG00000016316rpa19955.224ENSMNEG00000029837-9955.224Macaca_nemestrina
ENSPNYG00000016316rpa19963.432ENSMNEG00000031632-9863.898Macaca_nemestrina
ENSPNYG00000016316rpa19960.690ENSMLEG00000038768-9861.176Mandrillus_leucophaeus
ENSPNYG00000016316rpa19990.333ENSMAMG00000017993rpa19990.333Mastacembelus_armatus
ENSPNYG00000016316rpa19772.326ENSMAMG00000020097RPA19958.321Mastacembelus_armatus
ENSPNYG00000016316rpa110099.668ENSMZEG00005007551rpa110099.668Maylandia_zebra
ENSPNYG00000016316rpa19963.307ENSMZEG00005024731RPA19963.307Maylandia_zebra
ENSPNYG00000016316rpa19962.718ENSMGAG00000005315RPA19862.149Meleagris_gallopavo
ENSPNYG00000016316rpa19963.937ENSMAUG00000010474Rpa19864.407Mesocricetus_auratus
ENSPNYG00000016316rpa19964.111ENSMICG00000012867RPA19963.770Microcebus_murinus
ENSPNYG00000016316rpa19963.218ENSMOCG00000013019Rpa19963.218Microtus_ochrogaster
ENSPNYG00000016316rpa19984.192ENSMMOG00000014292rpa19986.034Mola_mola
ENSPNYG00000016316rpa19965.241ENSMMOG00000010868RPA19862.500Mola_mola
ENSPNYG00000016316rpa110063.149ENSMODG00000010549RPA19962.602Monodelphis_domestica
ENSPNYG00000016316rpa19989.667ENSMALG00000011453rpa19989.667Monopterus_albus
ENSPNYG00000016316rpa19972.540ENSMALG00000001208RPA18672.540Monopterus_albus
ENSPNYG00000016316rpa19963.399MGP_CAROLIEiJ_G0016734Rpa19963.666Mus_caroli
ENSPNYG00000016316rpa19962.995ENSMUSG00000000751Rpa19963.047Mus_musculus
ENSPNYG00000016316rpa19963.448MGP_PahariEiJ_G0017871Rpa19963.681Mus_pahari
ENSPNYG00000016316rpa19962.887MGP_SPRETEiJ_G0017577Rpa19962.945Mus_spretus
ENSPNYG00000016316rpa19964.583ENSMPUG00000013119RPA19963.993Mustela_putorius_furo
ENSPNYG00000016316rpa19963.212ENSMLUG00000006113RPA19962.399Myotis_lucifugus
ENSPNYG00000016316rpa19963.951ENSNGAG00000004522Rpa19563.819Nannospalax_galili
ENSPNYG00000016316rpa19962.766ENSNBRG00000009672RPA19761.204Neolamprologus_brichardi
ENSPNYG00000016316rpa110099.642ENSNBRG00000020595rpa19999.642Neolamprologus_brichardi
ENSPNYG00000016316rpa19963.542ENSNLEG00000017149RPA19963.132Nomascus_leucogenys
ENSPNYG00000016316rpa19954.878ENSMEUG00000006714RPA19754.822Notamacropus_eugenii
ENSPNYG00000016316rpa19962.287ENSODEG00000009038RPA19763.211Octodon_degus
ENSPNYG00000016316rpa110096.580ENSONIG00000013135rpa19996.580Oreochromis_niloticus
ENSPNYG00000016316rpa19964.706ENSOANG00000010880RPA19963.847Ornithorhynchus_anatinus
ENSPNYG00000016316rpa19961.120ENSOCUG00000001504RPA19960.842Oryctolagus_cuniculus
ENSPNYG00000016316rpa19958.000ENSORLG00000003368RPA19958.000Oryzias_latipes
ENSPNYG00000016316rpa19985.977ENSORLG00000004856rpa19985.977Oryzias_latipes
ENSPNYG00000016316rpa19668.000ENSORLG00020015284RPA18768.000Oryzias_latipes_hni
ENSPNYG00000016316rpa19986.144ENSORLG00020008980rpa19986.144Oryzias_latipes_hni
ENSPNYG00000016316rpa17566.901ENSORLG00015005867-9766.901Oryzias_latipes_hsok
ENSPNYG00000016316rpa19986.144ENSORLG00015013982rpa19986.144Oryzias_latipes_hsok
ENSPNYG00000016316rpa19959.272ENSORLG00015020383RPA19958.372Oryzias_latipes_hsok
ENSPNYG00000016316rpa19961.319ENSOMEG00000011040RPA19960.384Oryzias_melastigma
ENSPNYG00000016316rpa19982.638ENSOMEG00000004704rpa19982.638Oryzias_melastigma
ENSPNYG00000016316rpa17575.824ENSOGAG00000029379-9875.824Otolemur_garnettii
ENSPNYG00000016316rpa19963.542ENSOGAG00000005581-9963.235Otolemur_garnettii
ENSPNYG00000016316rpa19964.125ENSOARG00000014479RPA19963.339Ovis_aries
ENSPNYG00000016316rpa19963.542ENSPPAG00000039680RPA19963.295Pan_paniscus
ENSPNYG00000016316rpa19964.125ENSPPRG00000011807RPA19963.562Panthera_pardus
ENSPNYG00000016316rpa19964.125ENSPTIG00000007898RPA19963.562Panthera_tigris_altaica
ENSPNYG00000016316rpa19963.889ENSPTRG00000008539RPA19963.622Pan_troglodytes
ENSPNYG00000016316rpa19963.951ENSPANG00000024592RPA19963.458Papio_anubis
ENSPNYG00000016316rpa19975.041ENSPKIG00000008053rpa19875.537Paramormyrops_kingsleyae
ENSPNYG00000016316rpa19964.696ENSPSIG00000015617RPA19865.034Pelodiscus_sinensis
ENSPNYG00000016316rpa19985.586ENSPMGG00000011589rpa19685.586Periophthalmus_magnuspinnatus
ENSPNYG00000016316rpa19962.545ENSPMGG00000000543RPA19963.262Periophthalmus_magnuspinnatus
ENSPNYG00000016316rpa19963.763ENSPEMG00000021061Rpa19963.711Peromyscus_maniculatus_bairdii
ENSPNYG00000016316rpa19963.542ENSPCIG00000019049RPA19962.480Phascolarctos_cinereus
ENSPNYG00000016316rpa19986.833ENSPFOG00000003987rpa19986.833Poecilia_formosa
ENSPNYG00000016316rpa19360.585ENSPLAG00000008844-9659.350Poecilia_latipinna
ENSPNYG00000016316rpa19986.667ENSPLAG00000004984rpa19986.667Poecilia_latipinna
ENSPNYG00000016316rpa19987.000ENSPMEG00000020602rpa19987.000Poecilia_mexicana
ENSPNYG00000016316rpa19458.699ENSPMEG00000003627-9658.995Poecilia_mexicana
ENSPNYG00000016316rpa19272.082ENSPREG00000010119RPA18272.082Poecilia_reticulata
ENSPNYG00000016316rpa19379.070ENSPREG00000010174rpa19578.929Poecilia_reticulata
ENSPNYG00000016316rpa19964.460ENSPCOG00000001799RPA19963.399Propithecus_coquereli
ENSPNYG00000016316rpa19963.021ENSPVAG00000002149RPA19962.052Pteropus_vampyrus
ENSPNYG00000016316rpa19970.084ENSPNAG00000008599rpa19672.028Pygocentrus_nattereri
ENSPNYG00000016316rpa19970.874ENSRNOG00000003123Rpa19964.204Rattus_norvegicus
ENSPNYG00000016316rpa19964.298ENSRBIG00000036587RPA19962.704Rhinopithecus_bieti
ENSPNYG00000016316rpa19959.099ENSRROG00000043278RPA19957.818Rhinopithecus_roxellana
ENSPNYG00000016316rpa19531.481YAR007CRFA19431.481Saccharomyces_cerevisiae
ENSPNYG00000016316rpa19763.750ENSSBOG00000030233RPA19765.179Saimiri_boliviensis_boliviensis
ENSPNYG00000016316rpa19963.903ENSSHAG00000007969RPA19564.310Sarcophilus_harrisii
ENSPNYG00000016316rpa19981.239ENSSFOG00015005362rpa19281.095Scleropages_formosus
ENSPNYG00000016316rpa19272.146ENSSMAG00000019746RPA19957.991Scophthalmus_maximus
ENSPNYG00000016316rpa19272.917ENSSDUG00000016358RPA19172.603Seriola_dumerili
ENSPNYG00000016316rpa19990.833ENSSDUG00000011949rpa19990.833Seriola_dumerili
ENSPNYG00000016316rpa19272.222ENSSLDG00000020784RPA19171.918Seriola_lalandi_dorsalis
ENSPNYG00000016316rpa19991.167ENSSLDG00000011806rpa19991.167Seriola_lalandi_dorsalis
ENSPNYG00000016316rpa18878.788ENSSARG00000007506RPA18778.788Sorex_araneus
ENSPNYG00000016316rpa19962.587ENSSPUG00000007223RPA19863.373Sphenodon_punctatus
ENSPNYG00000016316rpa19990.833ENSSPAG00000009903rpa19990.833Stegastes_partitus
ENSPNYG00000016316rpa19965.714ENSSPAG00000011165RPA19964.250Stegastes_partitus
ENSPNYG00000016316rpa19965.295ENSSSCG00000017822RPA19864.358Sus_scrofa
ENSPNYG00000016316rpa19963.415ENSTGUG00000005775RPA19962.951Taeniopygia_guttata
ENSPNYG00000016316rpa19983.667ENSTRUG00000003616rpa19983.667Takifugu_rubripes
ENSPNYG00000016316rpa19271.729ENSTRUG00000000405RPA17971.330Takifugu_rubripes
ENSPNYG00000016316rpa19985.270ENSTNIG00000016199rpa19985.550Tetraodon_nigroviridis
ENSPNYG00000016316rpa17871.136ENSTBEG00000002709RPA17471.136Tupaia_belangeri
ENSPNYG00000016316rpa19962.378ENSTTRG00000001169RPA19962.745Tursiops_truncatus
ENSPNYG00000016316rpa19865.957ENSUAMG00000015676RPA19575.000Ursus_americanus
ENSPNYG00000016316rpa19965.591ENSUMAG00000009328RPA19963.072Ursus_maritimus
ENSPNYG00000016316rpa19962.912ENSVPAG00000009443RPA19961.412Vicugna_pacos
ENSPNYG00000016316rpa19963.542ENSVVUG00000021715RPA19963.339Vulpes_vulpes
ENSPNYG00000016316rpa19967.601ENSXETG00000013538rpa19967.881Xenopus_tropicalis
ENSPNYG00000016316rpa19385.152ENSXCOG00000010068rpa19485.152Xiphophorus_couchianus
ENSPNYG00000016316rpa19964.568ENSXCOG00000009899-9864.568Xiphophorus_couchianus
ENSPNYG00000016316rpa19985.000ENSXMAG00000004102rpa19985.842Xiphophorus_maculatus
ENSPNYG00000016316rpa19372.311ENSXMAG00000010333RPA18072.311Xiphophorus_maculatus

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