EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPNYG00000016409 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Pundamilia_nyererei
Status: putative
Strand: Plus strand
Length: 2945 bases
Position: chrJH419382.1:877424-880368
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPNYP00000021696	zf-C2H2	PF00096.26	6.1e-17	1	3
ENSPNYP00000021696	zf-C2H2	PF00096.26	6.1e-17	2	3
ENSPNYP00000021696	zf-C2H2	PF00096.26	6.1e-17	3	3
ENSPNYP00000021696	zf-met	PF12874.7	5.9e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPNYT00000022224	-	1526	-	ENSPNYP00000021696	432 (aa)	-	UPI000329FDC5

Gene Model

Click here to download ENSPNYG00000016409's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPNYG00000016409's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPNYG00000016409	-	55	48.718	ENSPNYG00000005202	-	93	51.613
ENSPNYG00000016409	-	61	51.587	ENSPNYG00000015803	-	92	52.101
ENSPNYG00000016409	-	91	44.444	ENSPNYG00000012877	znf236	60	42.169
ENSPNYG00000016409	-	55	39.831	ENSPNYG00000001524	ZNF319	80	39.831
ENSPNYG00000016409	-	57	41.053	ENSPNYG00000022271	znf319b	90	41.053
ENSPNYG00000016409	-	65	48.739	ENSPNYG00000019368	-	89	48.739
ENSPNYG00000016409	-	50	51.786	ENSPNYG00000019503	-	92	51.786
ENSPNYG00000016409	-	62	53.913	ENSPNYG00000018920	-	93	53.913

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPNYG00000016409	-	100	100.000	ENSACLG00000023669	-	100	100.000	Astatotilapia_calliptera
ENSPNYG00000016409	-	100	99.537	ENSHBUG00000011264	-	100	99.537	Haplochromis_burtoni
ENSPNYG00000016409	-	100	99.769	ENSMZEG00005020337	-	100	99.769	Maylandia_zebra