EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPNYG00000016531 (Gene tree)
Gene ID: 102215526
Gene Symbol: -
Alias: -
Full Name: interferon-induced protein 44-like
Gene Type: protein_coding
Species: Pundamilia_nyererei
Status: putative
Strand: Minus strand
Length: 7310 bases
Position: chrJH419241.1:380497-387806
Accession: 102215526
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPNYP00000021903	MMR_HSR1	PF01926.23	1e-05	1	1
ENSPNYP00000021914	MMR_HSR1	PF01926.23	1.1e-05	1	1
ENSPNYP00000021895	MMR_HSR1	PF01926.23	1.2e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPNYT00000022429	-	1062	-	ENSPNYP00000021895	353 (aa)	-	-
ENSPNYT00000022438	-	1017	-	ENSPNYP00000021903	300 (aa)	-	-
ENSPNYT00000022448	-	952	XM_013910108	ENSPNYP00000021914	300 (aa)	XP_013765562	-

Gene Model

Click here to download ENSPNYG00000016531's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPNYG00000016531's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPNYG00000016531	-	74	42.986	ENSPNYG00000016375	-	62	37.818
ENSPNYG00000016531	-	66	32.836	ENSPNYG00000001584	-	76	31.651
ENSPNYG00000016531	-	95	32.673	ENSPNYG00000013106	zgc:153654	64	32.959
ENSPNYG00000016531	-	75	31.304	ENSPNYG00000005478	-	77	31.140
ENSPNYG00000016531	-	99	36.964	ENSPNYG00000014740	-	65	33.898

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPNYG00000016531	-	97	96.587	ENSACLG00000022198	-	98	81.867	Astatotilapia_calliptera
ENSPNYG00000016531	-	75	66.964	ENSELUG00000013202	-	84	57.447	Esox_lucius
ENSPNYG00000016531	-	99	89.701	ENSHBUG00000009125	-	100	82.199	Haplochromis_burtoni
ENSPNYG00000016531	-	99	95.681	ENSMZEG00005016318	-	97	81.989	Maylandia_zebra
ENSPNYG00000016531	-	72	97.674	ENSNBRG00000021847	-	99	86.331	Neolamprologus_brichardi
ENSPNYG00000016531	-	74	65.929	ENSPNAG00000009985	-	72	58.955	Pygocentrus_nattereri
ENSPNYG00000016531	-	99	63.880	ENSSLDG00000007218	-	96	56.952	Seriola_lalandi_dorsalis
ENSPNYG00000016531	-	68	39.806	ENSTRUG00000002247	-	94	38.372	Takifugu_rubripes
ENSPNYG00000016531	-	69	36.408	ENSTRUG00000003706	-	87	35.146	Takifugu_rubripes